Nucleotide Global Alignment

Description

• Query: TRCN0000477154
• Subject: XM_005261741.3
• Aligned Length: 1067
• Identities: 828
• Gaps: 208

Alignment

Query    1  ---------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGACGCCGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  74

Query   54  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  148

Query  128  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  222

Query  202  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  296

Query  276  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  370

Query  350  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAG  423
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG  444

Query  424  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  518

Query  498  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  592

Query  572  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAG  645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAG  666

Query  646  CAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAA---------  710
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct  667  CAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAAAGCCCAGTC  740

Query  711  -----AGGTTCCCG---------------TCCGCACC-CT--------CTCAGACCT--------GAGG-----  742
                 |||.|||||               ||| |||| ||        |||.|  ||        ||||     
Sbjct  741  ATCTCAGGATCCCGCTAACCTTTTCTCCCTCC-CACCACTGCCTCCTCCTCCG--CTTCCCGCTGGAGGTCCTG  811

Query  743  -CTGAGCTTGCAGTGAGGGCTTC-TCCTC--GG------------CC---CCTCGCCC------GCCCC---CA  788
             ||.|.||| ||...|...|||| |||||  ||            ||   ||||..||      |||||   |.
Sbjct  812  CCTCATCTT-CATCCACCTCTTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGTCC  884

Query  789  GAG--------CTG-------------CCATCCCTG-------CTGTTACAAGCCAGAGG-------CACCCGG  827
            |.|        |||             |||||||.|       |||.|.|.||||....|       |||||  
Sbjct  885  GGGTTTTCTCTCTGCCTGCTCACGCCTCCATCCCGGGTCTGCCCTGGTCCCAGCCTCCCGTGCCCTCCACCC--  956

Query  828  ATGTGAGGC---------------CCCAGA------------TCACCTCCAGGG--ACTTGGGGTTCCCATC--  870
                 ||||               ||||||            .|.|||||.|.|  .|||..|||||||.||  
Sbjct  957  -----AGGCCCCCTGGCCCTGCATCCCAGAGCGTCCTGCCTGCCGCCTCCTGCGCCCCTTCTGGTTCCCGTCCG  1025

Query  871  -------------------------------  870
                                           
Sbjct 1026  CACCCTCTCAGACCTGAGGCTGAGCTTGCAG  1056