Nucleotide Global Alignment
Description
- Query:
- TRCN0000477195
- Subject:
- NR_120498.1
- Aligned Length:
- 3178
- Identities:
- 1508
- Gaps:
- 1506
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGGCGAGGCGTCCCCTGTCCTCCTCCGGGCCCGGCCCGGGGTGCGGGCGAGGCCCCGAGGCCCCCTCCCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGCTCGGGCGGAGCCGGACGGCCTGGCGGGAGCAGGCGCCGCGGGCCGCGAGCTCCTCATTCGAACCTCCCTC 148
Query 1 ---------------------ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGC 53
||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCAGACAGTCTCCGCCCCACAATGCACCGGGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGC 222
Query 54 GGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAAGGAAGCTTATCTA 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||
Sbjct 223 GGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCCCTTGTCAGTTTAAAAGAGGGAAGTTTATCTA 296
Query 128 ACACGTGGAATGAAAAGTACAGTTCTTTACAGAAAACACCTGTTTGGAAAGGCAGGAATACAAGCTCTGCTGTG 201
||||.||||||||||||||||||||||||||||||||.|||||||||||||||||||||.|..||.|||||||.
Sbjct 297 ACACATGGAATGAAAAGTACAGTTCTTTACAGAAAACTCCTGTTTGGAAAGGCAGGAATGCGGGCCCTGCTGTA 370
Query 202 GAAATGCCTTTCAGAAATTCAAAACGAAGTCGACTTTTTTCTGATGAAGATGATAGGCAAATAAATACAAGGTC 275
||||||||||||||||||||||||.||||||||||.|||||||||||||||||.||.|||||||||||||.|||
Sbjct 371 GAAATGCCTTTCAGAAATTCAAAAAGAAGTCGACTCTTTTCTGATGAAGATGACAGACAAATAAATACAAAGTC 444
Query 276 ACCTAAAAGAAACCAGAGGGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACCAGATAAGAAAG 349
||||||||||||||||||.||.||||||.|.||||||||||||||||||||.||||||||||||||||||||||
Sbjct 445 ACCTAAAAGAAACCAGAGAGTGGCAATGATCCCACAGAAATTTACAGCAACGATGTCAACACCAGATAAGAAAG 518
Query 350 CTTCACAGAAGATTGGTTTTCGATTACGTAATCTGCTCAAGCTTCCTAAAGCACATAAATGGTGTATATACGAG 423
|.||||||||||||||||||||||||||.||.||.|||||||||||.|||||||||||.|||||.|||||.|||
Sbjct 519 CATCACAGAAGATTGGTTTTCGATTACGGAACCTACTCAAGCTTCCCAAAGCACATAAGTGGTGCATATATGAG 592
Query 424 TGGTTCTATTCAAATATAGATAAACCACTTTTTGAAGGTGATAATGACTTCTGTGTATGTCTAAAGGAATCTTT 497
||||||||.|||||.|||||.||.||||||||||||||.|||||||||||.||||||||.|||||||||||.||
Sbjct 593 TGGTTCTACTCAAACATAGACAAGCCACTTTTTGAAGGAGATAATGACTTTTGTGTATGCCTAAAGGAATCCTT 666
Query 498 TCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATTCGGCGGCTTATGGGAAAACCACGGA 571
|||||||||||||||||||||.||||||||||||||||||||||||||..||.|.||.|||||||||||.||||
Sbjct 667 TCCTAATTTGAAAACAAGAAAATTAACAAGAGTAGAATGGGGAAAAATCAGGAGACTGATGGGAAAACCTCGGA 740
Query 572 GATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAAGGCTCTTACAA 645
|||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 741 GATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCCTTAAAACAGAAGCGGCAGAAAATCAGGCTGTTACAA 814
Query 646 CAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTGCCTCTGGTTATTGGAAC 719
||||||||||||||||||||||||||.||||||||||||||.||||||||.|||.|.||.||||||||||||||
Sbjct 815 CAAAGGAAAGTTGCAGATGTTTCACAGTTCAAAGATCTCCCCGATGAAATCCCTCTACCCCTGGTTATTGGAAC 888
Query 720 GAAAGTTACAGCACGATTACGTGGTGTTCATGATGGTTTGTTCACTGGACAAATAGATGCTGTGGATACTCTTA 793
.|||||||||||.||.||||||||..||||.|||||..||||.|||||.||.||||||||.|||||.|||||||
Sbjct 889 CAAAGTTACAGCGCGGTTACGTGGCATTCACGATGGCCTGTTTACTGGTCAGATAGATGCAGTGGACACTCTTA 962
Query 794 ATGCTACTTATAGAGTAACTTTTGATAGGACAGGGCTTGGAACCCATACCATCCCTGACTATGAAGTTCTCAGT 867
||||||||||.|||||||||||.|||||||||||.|||||.||.||.|||||.||||||||||||||||| .|
Sbjct 963 ATGCTACTTACAGAGTAACTTTCGATAGGACAGGCCTTGGGACTCACACCATTCCTGACTATGAAGTTCT--TT 1034
Query 868 AATGAACCTCATGAGACAATGCCAATTGCTGCCTTTGGACAAAAACAGCGGCCTTCTCGATTTTTTATGACCCC 941
|||||.||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1035 AATGAGCCTCATGAGACAATGCCAATCTCTGCCTTTGGACAAAAACAGCGGCCTTCTCGGTTTTTTATGACCCC 1108
Query 942 ACCACGGTTACATTATACTCCTCCTCTCCAGTCACCAATTATAGATAATGATCCTTTATTAGGACAGTCGCCGT 1015
.|||||||||||||||||.||||||||||||||||||||||.||||...|||||||||.|.||.|||||.||.|
Sbjct 1109 CCCACGGTTACATTATACCCCTCCTCTCCAGTCACCAATTACAGATGGCGATCCTTTACTGGGGCAGTCACCTT 1182
Query 1016 GGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTAGGTGGTTTTCCAGTAGAATTTCTTATCCAAGTGACC 1089
|||||||||||.||||||||||||||||.||.||.|||||.||.||||||||.|||||.||||||||.|||||.
Sbjct 1183 GGAGAAGTAAAGTTTCTGGCTCTGACACGGAGACGTTAGGAGGCTTTCCAGTGGAATTCCTTATCCAGGTGACT 1256
Query 1090 AGATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAA 1163
|..||||||||||||||||||||||||||.||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct 1257 AAGTTATCAAAAATTCTCATGATTAAAAAAGAGCATATAAAGAAATTAAGGGAGATGAACACAGAAGCAGAAAA 1330
Query 1164 ATTGAAATCATATTCCATGCCCATCAGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTGGAGCTTGAAC 1237
..|||||||.||||||||||||||..|||||||.||||||||||||||.|||||.||.||.|||||||||||.|
Sbjct 1331 GCTGAAATCCTATTCCATGCCCATTGGCATTGAGTTTCAGCGGAGATACGCAACGATCGTCCTGGAGCTTGAGC 1404
Query 1238 AGCTGAACAAGGACCTAAACAAAGTTTTGCATAAAGTTCAACAGTATTGCTATGAGCTTGCTCCAGACCAGGGG 1311
||||||||||||||||.|||||||||.|||||||||||||.||||||||||||||||||||.|||||||||||.
Sbjct 1405 AGCTGAACAAGGACCTGAACAAAGTTCTGCATAAAGTTCAGCAGTATTGCTATGAGCTTGCACCAGACCAGGGA 1478
Query 1312 CTCCAGCCTGCAGATCAGCCAACAGATATGAGACGCAGGTGTGAGGAAGAAGCACAGGAAATTGTTCGGCATGC 1385
|||||||||||.||||||||||||||.||||||||.|||||||||||||||||.||||||||.||.|||||.||
Sbjct 1479 CTCCAGCCTGCCGATCAGCCAACAGACATGAGACGGAGGTGTGAGGAAGAAGCCCAGGAAATCGTCCGGCAAGC 1552
Query 1386 AAATTCCTCAACAGGACAGCCCTGCGTTGAAAATGAAAATCTGACAGACTTAATTTCCAGGCTTACAGCTATTT 1459
.||.||..|..|.|||||||||||.||.|||||.|||||||||||.|||||.||.||||||||.||.||.||||
Sbjct 1553 CAACTCTGCTTCCGGACAGCCCTGTGTAGAAAACGAAAATCTGACGGACTTGATCTCCAGGCTCACTGCGATTT 1626
Query 1460 TGTTACAAATTAAGTGTCTAGCAGAAGGAGGAGACCTGAATTCCTTTGAATTCAAATCACTTACAGACTCATTA 1533
|.|||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.||.|||||.||||||
Sbjct 1627 TATTACAAATTAAGTGTCTGGCAGAGGGAGGAGACCTGAATTCCTTTGAATTCAAATCTCTCACAGATTCATTA 1700
Query 1534 AATGATATCAAGAGTACAATAGACGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATCCATGTTGCACA 1607
|||||.||.||.|..||||||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||
Sbjct 1701 AATGACATAAAAAACACAATAGATGCTTCTAATATCAGTTGTTTTCAGAATAACGTAGAAATCCATGTTGCACA 1774
Query 1608 TATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACATGCCTTTGCAGCAAATAACACCAACAGAGAC------- 1674
|||.||||||||||||||.|||||||||||||||||.|||||||||||.||.|||||.|||||||||
Sbjct 1775 TATCCAGAGTGGCCTGAGTCAGATGGGAAACTTACACGCCTTTGCAGCCAACAACACGAACAGAGACTGAGCAC 1848
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 1849 AGGATTCTGGTACCCAGCTGCACACAGCCATGGTCTGAGGAGTCCTGGTCCTTAACCCATGCTTCCAACACCAG 1922
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 1923 ATAACCTAGCTGCTGGAAAACCGGAGAACTGTACATCTCCAGATACGGCTTTTTAATACACTCTACTGCTTCTT 1996
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 1997 CAACCAGCATTGTGCTGACCAGCATTTATTTATTGTTCTTTTATTATCCAGATGCAGTAGTGTTGCTTATATTT 2070
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2071 CCTGTTTATCAGCAAACATTTTTAACCGGAAACTCTCTGAACGTACTATCCCATGGAGGATAAACCACTGTTTT 2144
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2145 ATGCATGCATGAATTCTGCTCAGCACATGCAGACGACTCCTGTGACAGACAGAGAACATGAAGAAGCACGGTCT 2218
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2219 TTCCATGCATGATGGTGGGAATCCCATCCGAGAGTCACCGGTCCAGTGGAGTTAGTTGGCATTATATCTTGGGC 2292
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2293 TGCAAAATAGACGTCATGAGTGTGAGAGTCCGAGTCGTAAGGAACCCGCTGGGGTACAGATGGGAAACACGGAC 2366
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2367 TTAAGTGTATGTTTCATATACTGACAGTGGGACATGGTTCTATAGATCAATTATAATAATAAATATTTTAATTT 2440
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2441 ATCATAATTTATAAAAGCTTTGTTGTTTATCAGCAGAGGAAATGAAGGAGCCGGAGGAACTGTACTGTGCCCCG 2514
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2515 CTGGATCCCAGCGGGTGGACTTGGCATGCCTTCCATGATTCAGGGCAAAAGTGTTAAGTGTTGAGACTTATTTT 2588
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2589 AAAAAAGACTGATGACACACTATTTTCGTATTTTTTTGTTTATTTGCACAACTTTAAACCAGATGACTGGTTAA 2662
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2663 AATTGAACAGTACACAATTTATAAAGTGAAAATCTTTTATAAGGAAAGCATATGACATGTGAATACACAGGGAG 2736
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2737 GTTTGGCTTTGGTTGTTTTGTTTGGTTTTGTTTTTTCTTTTTAAGAAAAACCCTGCCTAAAATAATCTTGTAAA 2810
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2811 AAGTATGTATTTTAAAATTTTTGTTTTAATATAGAATATTATAAAGCCAAAATATAATTGTTTTCAGATTTGGA 2884
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2885 GTTTAAAATAGAGCTATAGAGGTGGTTCTGATTCTTTGACGTCTCATAAAATGAGACTTTTGTATATTAATGTA 2958
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 2959 TAATAAAACTGAAATAAGATTATTTTCCTTGAAATTTTTGTATAGTTTAAAAATGCTTCTGTGTTCTTTGTTGG 3032
Query 1675 -------------------------------------------------------------------------- 1674
Sbjct 3033 TATTGGGCCACTGCAGATCTTAGTGCAGAGTTTATATTTAGCTAGACTGTTATGTTAATTAAGAAATGCATAAA 3106
Query 1675 ---------------------------------------------------------------------- 1674
Sbjct 3107 TCTTTTATTCTTAATATTTGTAATTCTAAATAAATCAATCTATGAAATTTAAAAAAAAAAAAAAAAAAAA 3176
