Nucleotide Global Alignment
Description
- Query:
- TRCN0000477200
- Subject:
- XR_002959730.1
- Aligned Length:
- 6080
- Identities:
- 1071
- Gaps:
- 5009
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGACCGCGCGGTGGGTGGGGGCGGGGTAGTGGGCGGGGCATCGGCAGGCTAGGTTTTCTCCGCGCAGCGCCAGT 74
Query 1 -----------ATGGCGCCGCGGAGGGTCAGGTCGTTTCTGCGCGGGCTCCCGGCGCTGCTACTGCTGCTGCTC 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGCAGAGGAAGATGGCGCCGCGGAGGGTCAGGTCGTTTCTGCGCGGGCTCCCGGCGCTGCTACTGCTGCTGCTC 148
Query 64 TTCCTCGGGCCCTGGCCCGCTGCGAGCCACGGCGGCAAGTACTCGCGGGAGAAGAACCAGCCCAAGCCGTCCCC 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTCCTCGGGCCCTGGCCCGCTGCGAGCCACGGCGGCAAGTACTCGCGGGAGAAGAACCAGCCCAAGCCGTCCCC 222
Query 138 GAAACGCGAGTCCGGAGAGGAGTTCCGCATGGAGAAGTTGAACCAGCTGTGGGAGAAGGCCCAGCGACTGCATC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAACGCGAGTCCGGAGAGGAGTTCCGCATGGAGAAGTTGAACCAGCTGTGGGAGAAGGCCCAGCGACTGCATC 296
Query 212 TTCCTCCCGTGAGGCTGGCCGAGCTCCACGCTGATCTGAAGATACAGGAGAGGGACGAACTCGCCTGGAAGAAA 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCCTCCCGTGAGGCTGGCCGAGCTCCACGCTGATCTGAAGATACAGGAGAGGGACGAACTCGCCTGGAAGAAA 370
Query 286 CTAAAGCTTGACGGCTTGGACGAAGATGGGGAGAAGGAAGCGAGACTCATACGCAACCTCAATGTCATCTTGGC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTAAAGCTTGACGGCTTGGACGAAGATGGGGAGAAGGAAGCGAGACTCATACGCAACCTCAATGTCATCTTGGC 444
Query 360 CAAGTATGGTCTGGACGGAAAGAAGGACGCTCGGCAGGTGACCAGCAACTCCCTCAGTGGCACCCAGGAAGACG 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAGTATGGTCTGGACGGAAAGAAGGACGCTCGGCAGGTGACCAGCAACTCCCTCAGTGGCACCCAGGAAGACG 518
Query 434 GGCTGGATGACCCCAGGCTGGAAAAGCTGTGGCACAAGGCGAAGACCTCTGGGAAATTCTCCGGCGAAGAACTG 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCTGGATGACCCCAGGCTGGAAAAGCTGTGGCACAAGGCGAAGACCTCTGGGAAATTCTCCGGCGAAGAACTG 592
Query 508 GACAAGCTCTGGCGGGAGTTCCTGCATCACAAAGAGAAAGTTCACGAGTACAACGTCCTGCTGGAGACCCTGAG 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAAGCTCTGGCGGGAGTTCCTGCATCACAAAGAGAAAGTTCACGAGTACAACGTCCTGCTGGAGACCCTGAG 666
Query 582 CAGGACCGAAGAAATCCACGAGAACGTCATTAGCCCCTCGGACCTGAGCGACATCAAGGGCAGCGTCCTGCACA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGGACCGAAGAAATCCACGAGAACGTCATTAGCCCCTCGGACCTGAGCGACATCAAGGGCAGCGTCCTGCACA 740
Query 656 GCAGGCACACGGAGCTGAAGGAGAAGCTGCGCAGCATCAACCAGGGCCTGGACCGCCTGCGCAGGGTCAGCCAC 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCAGGCACACGGAGCTGAAGGAGAAGCTGCGCAGCATCAACCAGGGCCTGGACCGCCTGCGCAGGGTCAGCCAC 814
Query 730 CAGGGCTACAGCACTGAGGCT----------------------------------------------------- 750
|||||||||||||||||||||
Sbjct 815 CAGGGCTACAGCACTGAGGCTGGTGAGTGCCCGCCCGGGACTGTTGGTTCCCGAGGGTGGGGCCGTCTCTGGTT 888
Query 751 -------------------------------------------------------------------------- 750
Sbjct 889 GTGTTTTGGGGACAAGCAGGCAGGTGCTTGTAGCGACGGGAACCTGGGCCTGTGGACGCAGCGGAGACCCTCGG 962
Query 751 -------------------------------------------------------------------------- 750
Sbjct 963 CGCGCTCAGTCTACCCACGGGTGGTCACAGGCCTCGCTCCCAGGAGCTGCTCCGTGAAGGTCACTCGCCGTCCC 1036
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1037 CAGCCTTGTACCTGGAGACTAGCAGAGGGCAGTGGCGGCAGCGGGCCTGGGAGCAGCCCTTCCCAGCGTCTCCC 1110
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1111 CAGCCTCAGCAGCACGGCCCCTCCCGTGCTGCTGTTGGCCAAGAACAGAGACCACTCGTCAAACATAGCTCCGT 1184
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1185 CTCCATCTCATGCCACCCACACCGTCCATCAGTCCCCCTCAGCCCGGCAGGGGCAGGACGCCCGCTGAGGCCAC 1258
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1259 AGAGCTTGTGGCTCCGTCTCAGCAGCTCATCTCCCTCCACTGCAGGCCCTCAGTGGCCAGGCTCTGCACCACTG 1332
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1333 CTTCTTGCCCCGTACCCGGGCCAGAGCCTTGTGCAGGGTGTACCAGAAGCCTGCTGGCCTCACTCACGCAGCTT 1406
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1407 CCGATTCTGTACCTCATCCTCCACGTGCACACTGAGCACCAGCTGCACGCCAGGCACTGCTCTAGGCTCGAGGA 1480
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1481 GACAGCAGCCGCCAGGAGATGGCATCTGTGCCCTCATGGTGATAAGACAGCAGGGCTGGTCTCTGTCCCCGGTG 1554
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1555 CCAGGCAGAGCCACCGCCTCGTCTCCAGGATGGTCTGCCCAGAGGCAGCCTCCAGCACAGCAGTCAAATGTGTC 1628
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1629 CACGCGGGCCCAGGTCCCCTTGGGTGGCTGTGCTGCTGTCACCTGAGTGCCCTTGGGCAAGACCCCTCACCACC 1702
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1703 CACCCCCAAACCCAGGCTCCCTTAGCCTGACCTGGTGCTGGTGACTGTCAGCCGTAGGCTTTTGGCCGTAGTGC 1776
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1777 TGGGGGCTGGACCACCTTGTAGGCCTGCGATGCAGTTTGCTGAGTTCCTGTGCTGGAGAGACCCGGATGAGCCT 1850
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1851 GGCTATAGTCCATGCAGGAAAGGGCGACTCAGCCCCACACACTTCTCTTCCCACCTCGGGCTGTCCCCAAGGCA 1924
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1925 GTTGTGTCCAGCGGCTCCTGCAGTTCTCTTGCGGGTCTGCCTGGGCCTTCCAGCAAGCCCCACCAGCCCAGGGT 1998
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1999 CCTCGGGGTCCTGAGCAGGAAGGGGTCAGCAGAGGAGGGAGCAGGGGCCACTGTTGCGGGGCTCCATGGGCAGG 2072
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2073 CGGCTCTGGACTACTCACTCCTGGTTGGAGAGTGGTGACAGCCCCGGAGTCTCTCACTGCGTCCCTTCGTGAGC 2146
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2147 ACCAGGGTCCAGGAGCCGTCTTGGTTTGTTTGGCTCCTCCCAGGAGCCCGAATGTTTGACTTTCACGAGCACAA 2220
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2221 CATCCTGCTGGAGACCCTGAGCAGGACCGAAGGGAAACGGCCTGTGCCTGCGTCTGGACCTGGCTGAACTTGCA 2294
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2295 GGTGCCCCCACCCGAGGTCCTGGCAGCCTCTGCACACAGGCCACGTCCATCCTCTGCCTCCTGCTTCAGAGGCA 2368
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2369 GCCAGGGCGGGCTGTGGCGCTTCCCAGGCTCTGATGGAGGCAGGTGTTTCTGGACACAAAGGAGAAGCAGTTGT 2442
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2443 TTGGCCAAGGGGACAGAGAAGCCACATTTCAGCGAGGTCATGTGAGCTACTGAGCAGATGCCCTCTGTGCCCCA 2516
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2517 TAAGACTTTGAGTGCACGCACCCGTGTTTCACACACATGCAGGTCGCGCCTGCAAACCCTCATAGGCTCCACGC 2590
Query 751 -------------------------------------------------------------------------- 750
Sbjct 2591 ACACTCAGCGTGGTTGCCGCGGGGCTGGCTGTGGTGTGCACCCCGGGTGCTGCTGAGGCCACTCTTGCTCCTCC 2664
Query 751 ------GAGTTCGAGGAGCCCAGGGTGATTGACCTGTGGGACCTGGCGCAGTCCGCCAACCTCACGGACAAGGA 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCTGCAGAGTTCGAGGAGCCCAGGGTGATTGACCTGTGGGACCTGGCGCAGTCCGCCAACCTCACGGACAAGGA 2738
Query 819 GCTGGAGGCGTTCCGGGAGGAGCTCAAGCACTTCGAAGCCAAAATCGAGAAGCACAACCACTACCAGAAGCAGC 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GCTGGAGGCGTTCCGGGAGGAGCTCAAGCACTTCGAAGCCAAAATCGAGAAGCACAACCACTACCAGAAGCAGC 2812
Query 893 TGGAGATTGCGCACGAGAAGCTGAGGCACGCAGAGAGCGTGGGCGACGGCGAGCGTGTGAGCCGCAGCCGCGAG 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGGAGATTGCGCACGAGAAGCTGAGGCACGCAGAGAGCGTGGGCGACGGCGAGCGTGTGAGCCGCAGCCGCGAG 2886
Query 967 AAGCACGCCCTGCTGGAGGGGCGGACCAAGGAGCTGGGCTACACGGTGAAGAAGCATCTGCAGGACCTGTCCGG 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 AAGCACGCCCTGCTGGAGGGGCGGACCAAGGAGCTGGGCTACACGGTGAAGAAGCATCTGCAGGACCTGTCCGG 2960
Query 1041 CAGGATCTCCAGAGCTCGGCACAACGAACTC------------------------------------------- 1071
|||||||||||||||||||||||||||||||
Sbjct 2961 CAGGATCTCCAGAGCTCGGCACAACGAACTCTGAAGGCATTGGGGAGCCCAGCCCGGCAGGGAAGAGGCCAGCG 3034
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3035 TGAAGGACCTGGGCTCTTGGCCGTGGCATTTCCGTGGACAGCCCGCCGTCAGGGTGGCTGGGGCTGGCACGGGT 3108
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3109 GTCGAGGCAGGAAGGATTGTTTCTGGTGACTGCAGCCGCTGCCGTCGCGACACAGGGCTTGGTGGTGGTAGCAT 3182
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3183 TTGGGTCTGAGATCGGCCCAGCTCTGACTGAAGGGGCTTGGCTTCCACTCAGCATCAGCGTGGCAGTCACCACC 3256
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3257 CCAGTGAGGACCTCGATGTCCAGCTGCTGTCAGGTCTGATAGTCCTCTGCTAAAACAACACGATTTACATAAAA 3330
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3331 AATCTTACACATCTGCCACCGGAAATACCATGCACAGAGTCCTTAAAAAATAGAGTGCAGTATTTAAACCACCC 3404
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3405 GCTTGTTGGCTGGTCACTAAGTGTCCTGGTGGCTGGGGCCGGAGCCAGTGCTCTTGAAGGGATCGCGTCATAGC 3478
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3479 CAGCTTCCCCTCTGGGCCCTGTGGGTCTTTGCAGCCAACCTCCTTTTCCCGTGAGACGGCCCGGCCTGATTTAA 3552
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3553 AGCCAAGAGCGCTTGAGTTGAGTTTGAGGGGAAGATGTGGAGCGTGTGGTTCTGTGGACAGTCAGAGACTGTGG 3626
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3627 CCTGGGGGCAGCGTCTTTCAACTCTCACCTCTGCAGCTCAGGGACCTCGGGAGACCTCACCAAACCTGCAGGGC 3700
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3701 CTCCGTGTCCCTAAGTGTGCTGTGTAAATGCCCCATCTCATGGGGGAGAGACAGCCACGGAGGCCTTCCTCTGA 3774
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3775 CCATAGCTGATGGACTGGCGGTTGCTCAGGTCCGGCTCCGAGAATGTTCCTGTGTCTGAGCCTGGAAGAGGCTC 3848
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3849 GGGTCTGGCTCCAGGCGTGGTTCCCTTCCCGTGTCTGAGCCTGGAAGAGGCTCGGGTCCGGCTCCGAGCGTGGT 3922
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3923 TCCCTTCCCGTGTCTGAGCCTGGAAGAGGCTCGGGTCCGGCTCCGAGCGTGGTTCCCTTCCCGTGTCTGAGCCT 3996
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 3997 GGAAGAGGCTCGGGTCCGGCTCCGAGCGTGGTTCCCTTCCCGTGTCTGAGCCTGGAAGAGGCTCGGGTCCGGCT 4070
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4071 CCGAGCGTGGTTCCCTTCCCGTGTCTGAGCCTGGAAGAGGCTCGGGTCCGGCTCTGGGCGTGGTTCCCTTCCCG 4144
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4145 TGTCTGAGCCTGGAAGAGGCTCGGGTCCGGCTCTGGGCGTGGTTCCCGTGTCTGAGCCTGGAAGAGGCTCGGGT 4218
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4219 CCGGGTCCAGCTCCGAGCGTGGTTCCCGTGTTTGAACCTGGAAGAGGCTCCACCAGGCGTATTGTGTTTTGACT 4292
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4293 GCAGCTGGATCTTGGCTTGACTGTTGAGATCTGCCAAACATCCGCTAAGCTATCATTTCTGAGAAAGGTCAAGG 4366
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4367 CTAGAGGCAGCATGTCGGGAGTTGGCGCATCAGGGTTGGAAGGGCCCCAGGGTACAGCATGTGGGTGCCTGTTC 4440
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4441 CTTTGTGGACTTGTGTGTGTGTGGCTGGTGGGGCGGGGGGTGGATTCTGGTTCTTTTTTTTCCCATTATCCTGA 4514
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4515 GAGCCTTAAGGTACTCAGTGTGTTGGTGAGACTCAGCCCTGTCATCTAGCAGAAGTGTGTTCCTTTTCATTGCT 4588
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4589 GTATAGTATTCCATTGCATGACTGTCCTGTGCTCTGATTTTAATGCACTTTATTGTGGGTGGATATTTGAGTTG 4662
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4663 CTTCCTTTCTGGGGTAATAACACTCACTTGGAAATAGCTGTGGTGAACACTCGTGTGGGGGTGGGGGTGGGGGC 4736
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4737 CAACTCTAGGAGCACCTAATGGATCTTACGAAGCGTGTTGTCCAAGTATAGAGATGATTCCAAAGTGGTTGGAC 4810
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4811 TGTGTTTCTTTCTCCCAGCTGGGTGGAAGGAGAACACTAGTGGATTGCTGAGACTTGGTGCTCGGTATTTTTAA 4884
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4885 TTATGGACAGCCTGGCTGGCGTTTTGTGGTGTCTAATTGCGGAGTAGCGTGTCTTACTGTATAATGGCCTCTTT 4958
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 4959 TGTATGTGGGAGACCATGGTGTTGAGGGGAGGCAGTTACACAAAAAACCCAGATACCGAGTGTTAGTTCCATGG 5032
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5033 GTGTGGCTGGTCATGGTGCGCACTCACGAAGGATGTAGGTGATGCCCTCCACTCCGCAGAGCCAGTCCCACAGG 5106
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5107 GGTACCCATTCTGACTCCTACCACCGCAGCTCCCTACCTCCCGCCTGCCATGGGTTCCACGTGCATGGCTCTGG 5180
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5181 GCAGTCTGTGTCTTTGCGTGCGTCTGTGTATGTCTGCGTGTATCTGCTTACATTCGCTCAGCATCTGAGATTCA 5254
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5255 CCCAGGCTTTTGCGTGGATCAGCGGCAGACTCCTGATTGCCGCGTGGCGGCCTGTTGTGTGGGTGTGTGCCGCG 5328
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5329 TGTGTATCCAGTCCCTACTCAGGAGTGTACGTTTCCAGTGTGGGTTGCAGTCAGGATCCATTTCTCCCTTAACT 5402
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5403 TTCAGATTATTTGCTGCATAGGCTTTTTTCTCCTAATTTGGCGCCTTTGTCAGAAATCAACTGACCTACCTGTG 5476
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5477 TGGGTCTGTTTCTGTTTGTCCTTACGCTCTTGCCATTGCCACACTTTAGACAAGGTCTTGCTCTGTCCCTCAGG 5550
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5551 CTGGAGTGCAGTAGCGTGATCTCAGCTCACTGCACCCTTGACCTCCCATACTCCAGCAATCCCCTCGCCTCAGT 5624
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5625 CTCCTGAGTAGTAGCTGCGACCACAGGCGTGTGTCACCACACCCGGCTGATTTTATTTTTTTTATTTTTATTTT 5698
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5699 TTTTGTAGAGACGGGGTTTTACTATGTTGCCCAGGCAGGTCTTGATCTGGGCTCAAGTGATGCTCCTGTCTCAG 5772
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5773 CCTCCCAAACTACTGGGATTACAGGTTGTAGGTGTGAGCCATGGTGCCCGGCCGCCACACTGTCTTGGCTACAG 5846
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5847 TTGGGTTTATAATAAACCCTGAATCGAGGTGATGTGCATTTTCCAACTCTTCTTTTTAAAGATTCTTGTGGCTG 5920
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5921 TTTATGTCCTTGGTGTTTCCATATATGTTTTACAATCAGTGTCTCAATTTCTACCAAAAAAACATGCCTTCTGG 5994
Query 1072 -------------------------------------------------------------------------- 1071
Sbjct 5995 AATTTCAATAGCAATTCCCTTGAACGCATTTTTGAATACCTTTTCTGAATGTCTTGAATACATGTTGGGAAGAA 6068
Query 1072 ------------ 1071
Sbjct 6069 TCGGTGTCTTAA 6080
