Nucleotide Global Alignment

Description

Query:
TRCN0000477220
Subject:
NR_148699.2
Aligned Length:
4547
Identities:
1630
Gaps:
2916

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACGTGACGGGCCCGGCTGTAGCGGCGGCGGCCGCGGCGTCTTAAGCGGCGCCCAGTGCAGGATGGTGCTGGAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCGGCGGCCGTGGTGGCGGCAGCGTCGTTGGCGGCAGCGGGAGTGGGTGCGGCGGCAGCGGCGGCGGCGCCC  148

Query    1  --------------ATGGCGGATTTCGAAGATTTGAGGAATATGGTTTCTAGTTTTAGGGTTTCTGAACTACAA  60
                          |||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCGGGTGGTATAAAATGGCGGATTTCGAAGAGTTGAGGAATATGGTTTCTAGTTTTAGGGTTTCTGAACTACAA  222

Query   61  GTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTGCATTTATT  134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCATGACCTCCTGATGAGGGCGCTGCATTTATT  296

Query  135  GAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACGAACTCTTG  208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATTGTATAGACGCCGATATCCACGAACTCTTG  370

Query  209  AAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTGTAGAACCT  282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTTTGGATGGTGGCTCATCACCTGTAGAACCT  444

Query  283  GACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCTCCTGTTGG  356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTTACACCTCACTCACCATCCTCTCCTGTTGG  518

Query  357  TTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCCTGTCCATC  430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCAGCCATCTCCCCCAATTCCTCCTGTCCATC  592

Query  431  CTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTTTAGTTCAA  504
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  593  CTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATGTTCTCATCAAGCCCACGAGTTT-------  659

Query  505  AGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTGACACCTCAACAAGTTAGAGAGATATGCAT  578
                                                                                      
Sbjct  660  --------------------------------------------------------------------------  659

Query  579  ATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCTGGCAGAGA  652
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660  ----AGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCAAGTTCAGTTGAGACTTTGCCTGGCAGAGA  729

Query  653  CAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTCCTTTGCCT  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  730  CAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAAAAGTAAATGGGAAGCTATTTCCTTTGCCT  803

Query  727  GGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACATCTTTAGT  800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  804  GGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCTGGACGCCCCTTGAATATTACATCTTTAGT  877

Query  801  TAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTACTCTATGT  874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  878  TAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGCATCAGAAATTGGGAAGAATTACTCTATGT  951

Query  875  CTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTAGAAACCCT  948
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  952  CTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGAGATTAAAAATGAAAGGTATTAGAAACCCT  1025

Query  949  GATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCG  1022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  GATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCTGATAGTGAAATTGCTACAACTAGCCTTCG  1099

Query 1023  GGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTACACATCTGC  1096
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  GGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCCATGCCGTGCAGTGACTTGTACACATCTGC  1173

Query 1097  AGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGTGTGACAAA  1170
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  AGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGCCCACCTGGATTTGTCCTGTGTGTGACAAA  1247

Query 1171  AAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGA  1244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248  AAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAAATTCTCAATGACTGTTCTGATGTAGATGA  1321

Query 1245  GATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAAC  1318
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1322  GATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAAGAAAGAAGCTATGAAAGTATCCAGCCAAC  1395

Query 1319  CGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAG  1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396  CGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTTCAGTGACTGTAGCCAGTGAGGCAAGCAAG  1469

Query 1393  AAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAA  1466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470  AAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGACGAAGAGGAAGACCCTCCTGCCAAAAGGAA  1543

Query 1467  ATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGG  1540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1544  ATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGTTCTCATGTATCAGCCATCTTCTGTAAGGG  1617

Query 1541  TGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCATTCCACCAT  1614
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618  TGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCATTAACAGACTACTCAGTACCATTCCACCAT  1691

Query 1615  ACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAACTGAAGCT  1688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692  ACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGAAGAAATGATATTAATAATGAACTGAAGCT  1765

Query 1689  TGGAACATCTTCTGATACTGTGCAACAG----------------------------------------------  1716
            ||||||||||||||||||||||||||||                                              
Sbjct 1766  TGGAACATCTTCTGATACTGTGCAACAGTGAATACAAAATAAAACAAATAATTTGTATTTATGGAGTGGAAAAC  1839

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1840  AGCTTATTTCAAGGAAAAATATGACTGCCTTATTATTGCTAGTGCCATATTGTCAGGTGCGAATGGTGCTCAAA  1913

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1914  AGTTGTATCATTAAAATTTGAAAGTGCTAAACATTTACATATTTAATCATGTAGCAGTTATGTTTTGTTAAAAG  1987

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 1988  TTTATGACTCAAATAAGGAAAATGTGTTGTCATCAATGAGAAAAAATCTAATGAGTCAATTTCACAGTGAAGCA  2061

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2062  CTTAAAATTTTTAAATTAAAATTTTATCAGTGTTAATAAAATAATGTTAACACTACCTGCTTTTTAGTTAAAAG  2135

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2136  TAATTGAGCATTTTCAACCATGAAATACTTCGGAGGGCATAAAAATATATCAGTATGACACGCTGCAGTTGAAA  2209

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2210  CTTATGGTGAAATAAGAAACAGCATTTTGCTAAACTTACGAAACAAGGCAGTAAAATTTTAATCACTACTGATG  2283

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2284  AAACTTGATTTTATATAAGAGTTTTAATATTCTGCTTAAAATGTAAAATGCAAGAAGACTTTGATGGTTTCGTT  2357

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2358  TTTTGTTAGAAAGAATAACATCTAAAATACCATATCAAACTTCACTGTTAGTACTTGAGAAAAAAATGGTTTCA  2431

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2432  GTGAGAGAAATATTTACATTAAACAGGTTTTATATAGACAGCACCCTTGTAATGCTTGGTAAACAATCTAGAAT  2505

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2506  TCCAACCAATATTTTAGAAAAATTTCTAGGTATTTTATTATGGTGTTGTATAAGTCACCACATTCAATTTTCCG  2579

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2580  TGGATGAGGTATCAATATACAGATAAGTAAATCTCTTAATTGTTTTCTAAATAAACTTTATATTTACCACACAC  2653

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2654  ATGAAATCATCAAAGAGAATTACAGTACATCTGAAGAACTGGAATTGAAATAACAAAAATAGGATCCTCAGTGG  2727

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2728  GTATTCTCTGGTGATAGAGCTTCAATTTTTAATTTCAATTAAAATAAATAGGCTTGATATAATTTTCAAACTGT  2801

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2802  TTTATATCAAGCTTGCGTATTTTAATTGAAATTCTGAAATTGAAATAGTTGAACATTTAGAAAATGAGCATTTT  2875

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2876  TGAGTGGCTTGGCTTCAGTACACAATATTCCAACACCATTGTCAATACTTAGCGTTATAAAAAGGTTTCAGTTA  2949

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 2950  CTAACATGAACTGAGAGATACAGCAAATATTAAAGATGATTGAACATATGAAACTGAAAAACTATAAAAAGGTA  3023

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3024  GAAGCTATTGTAAAAATGAAGAAAACTGAAAAACTGAAAAGATAAGAAGTTACTGTAAAAAGAAAACGGTTATA  3097

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3098  CCATTTGAAGCAGAACAAAATGTTCCAATAAACTTTTTTTACTTAATAATAGAAATATTGAAAATGCAAAACTC  3171

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3172  TGAAGGTATTACAAGGGCTAGACAAATTTTGAATTGTTTGGCATAAGAAGGGAGAGGATTTATTGAATATTATT  3245

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3246  AATATGAAGACAAAATCTGCTTATTGAGATATCTCACCTATTATCATTTTAATAGAGAAGTCATTGGAAAAGTT  3319

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3320  TGTTGTAATTCTCTTTGGTTTAGTATTGGCTCAAACCACTGTGTCATATAGCTAGTGACAGACATATGAAATGA  3393

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3394  AAAATTACAGCAAGCTGGGTGCGGTGGCTTATGTCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATC  3467

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3468  ACTTGAGCTCTGGAGTTCAAAACCAACCTAGGCAACATAGCGAGACCCTCTCTCTACAAAAAAAAAATAATAAT  3541

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3542  AATAATTAGCTGGGCATAGTGACACACACCTGTAGCTCCTGCTTCTTGCGAAGCTGAGGCCAGAAGGTAAAGGC  3615

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3616  TACAGTTACCTATGATTGTGCCTCTGCACTCCAGCCTGGGCAACAGAGCAGACTCAGTGTCTCCCAAAAAAAGG  3689

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3690  AAAAAAAAAAAATCTGTAGCAACAATTTTCAAAAAGGCTTTAGAAATCGTTGGAATGATTTCTTTCAAATGATT  3763

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3764  GGTGCTATAGCTTGTATCACTTGATAAGCATTTTTGTAATACCCTTATTTGGAGATTATAAGAGAATAAATATA  3837

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3838  CTTAAATTTTTTGAGTTATAAATTCATACTGGTTAGTAGATATTTTAAATGTACCCACTGATATTCTCTATTTT  3911

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3912  GCATAAAAGCATAATGTCAGACTTTCTCTGTGTGGTGGTTATATTCGGGGTGTCTCTGAATGCCAGCATAAAAA  3985

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 3986  TTCACGGAATTGAATAGAAATTGGCCTGTCTTAATGACCTATGGTTTCTTTTTTAATGTTTTGAAATAATTAAA  4059

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 4060  GAGAGTTTAGTCACACAGGGAGGTCTAGGTGAACTGATGTTGAAGTTTATTACTAGACTTTTCAGACCTAAAAA  4133

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 4134  TTTTATTTATTGTTATTACTTGAATATGTCAAAAGTATATTACTGGACAACCTTTTACACATTCCTCTTTCTAA  4207

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 4208  AATCGAATTGGACAATTACAGTTCTCTGGTTCAGAAAATTACATTAGCTCAGAACCCAGTAACCCTTGATAACC  4281

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 4282  CTGTTAGCGCAGCAATTCCCGAGTGTGTGCTTTGTGCAGAGCGTTGGACTATGTACTGCTCTTGATGTGGGGAC  4355

Query 1717  --------------------------------------------------------------------------  1716
                                                                                      
Sbjct 4356  AGCGGGGACAGAGAGCTGTCATTGAAATAGACATCTGTTTAAGAAGCGATACTTAGATGAACCTCTGTATTTCT  4429

Query 1717  ---------------------------------  1716
                                             
Sbjct 4430  GAAAAATAAATGTGAAATATCTTAAGAGCTTAA  4462

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