Nucleotide Global Alignment

Description

Query:
TRCN0000477220
Subject:
XM_024451283.1
Aligned Length:
1833
Identities:
1528
Gaps:
297

Alignment

Query    1  --------------------------------------------------------------------ATGGCG  6
                                                                                ||||.|
Sbjct    1  ATGCTGGGAAGCAACTACAAAGAACACTGCACAGTGGCTGTACCATTTTACATCCCTACCAGCAATGTATGGAG  74

Query    7  -GA-----TTTCGAAG------------------------------------ATTTGAG-------GAATATGG  31
             ||     ||||..||                                    ||||.||       ||||||||
Sbjct   75  TGATCCAGTTTCTCAGCATCCTCGCCAGCATTTGGTGTTATCAGTGTTTTTCATTTTAGCCATTCTGAATATGG  148

Query   32  TTTCTAGTTTTAGGGTTTCTGAACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCAT  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTTCTAGTTTTAGGGTTTCTGAACTACAAGTATTACTAGGCTTTGCTGGACGGAATAAAAGTGGACGCAAGCAT  222

Query  106  GACCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATT  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACCTCCTGATGAGGGCGCTGCATTTATTGAAGAGCGGCTGCAGCCCTGCGGTTCAGATTAAAATCCGAGAATT  296

Query  180  GTATAGACGCCGATATCCACGAACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTT  253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTATAGACGCCGATATCCACGAACTCTTGAAGGACTTTCTGATTTATCCACAATCAAATCATCGGTTTTCAGTT  370

Query  254  TGGATGGTGGCTCATCACCTGTAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTT  327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGATGGTGGCTCATCACCTGTAGAACCTGACTTGGCCGTGGCTGGAATCCACTCGTTGCCTTCCACTTCAGTT  444

Query  328  ACACCTCACTCACCATCCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCA  401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACACCTCACTCACCATCCTCTCCTGTTGGTTCTGTGCTGCTTCAAGATACTAAGCCCACATTTGAGATGCAGCA  518

Query  402  GCCATCTCCCCCAATTCCTCCTGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATG  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCATCTCCCCCAATTCCTCCTGTCCATCCTGATGTGCAGTTAAAAAATCTGCCCTTTTATGATGTCCTTGATG  592

Query  476  TTCTCATCAAGCCCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTG  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCTCATCAAGCCCACGAGTTTAGTTCAAAGCAGTATTCAGCGATTTCAAGAGAAGTTTTTTATTTTTGCTTTG  666

Query  550  ACACCTCAACAAGTTAGAGAGATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCA  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACACCTCAACAAGTTAGAGAGATATGCATATCCAGGGATTTTTTGCCAGGTGGTAGGAGAGATTATACAGTCCA  740

Query  624  AGTTCAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAA  697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGTTCAGTTGAGACTTTGCCTGGCAGAGACAAGTTGCCCTCAAGAAGATAACTATCCAAATAGTCTATGTATAA  814

Query  698  AAGTAAATGGGAAGCTATTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCT  771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAGTAAATGGGAAGCTATTTCCTTTGCCTGGCTATGCACCACCGCCTAAAAATGGGATTGAACAGAAGCGCCCT  888

Query  772  GGACGCCCCTTGAATATTACATCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGC  845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGACGCCCCTTGAATATTACATCTTTAGTTAGGTTATCTTCAGCTGTGCCAAACCAAATTTCCATTTCTTGGGC  962

Query  846  ATCAGAAATTGGGAAGAATTACTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGA  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATCAGAAATTGGGAAGAATTACTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCATGTTATTACAGA  1036

Query  920  GATTAAAAATGAAAGGTATTAGAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCT  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GATTAAAAATGAAAGGTATTAGAAACCCTGATCATTCCAGAGCACTAATTAAAGAAAAACTTACTGCAGATCCT  1110

Query  994  GATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCC  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GATAGTGAAATTGCTACAACTAGCCTTCGGGTATCCTTGATGTGCCCTTTAGGAAAAATGAGGCTGACAATCCC  1184

Query 1068  ATGCCGTGCAGTGACTTGTACACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGC  1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGCCGTGCAGTGACTTGTACACATCTGCAGTGTTTTGATGCTGCCCTCTATCTACAAATGAATGAGAAAAAGC  1258

Query 1142  CCACCTGGATTTGTCCTGTGTGTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAA  1215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCACCTGGATTTGTCCTGTGTGTGACAAAAAAGCTGCCTATGAAAGTCTAATATTAGATGGGCTTTTTATGGAA  1332

Query 1216  ATTCTCAATGACTGTTCTGATGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAA  1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATTCTCAATGACTGTTCTGATGTAGATGAGATCAAATTCCAAGAAGATGGTTCTTGGTGTCCAATGAGACCGAA  1406

Query 1290  GAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTT  1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GAAAGAAGCTATGAAAGTATCCAGCCAACCGTGTACAAAAATAGAAAGTTCAAGCGTCCTCAGTAAGCCTTGTT  1480

Query 1364  CAGTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGAC  1437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CAGTGACTGTAGCCAGTGAGGCAAGCAAGAAGAAAGTAGATGTTATTGATCTTACAATAGAAAGCTCTTCTGAC  1554

Query 1438  GAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGGT  1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1555  GAAGAGGAAGACCCTCCTGCCAAAAGGAAATGCATCTTTATGTCAGAAACACAAAGCAGCCCAACCAAAGGGTT  1628

Query 1512  TCTCATGTATCAGCCATCTTCTGTAAGGGTGCCCAGTGTGACTTCGGTTGATCCTGCTGCTATTCCGCCTTCAT  1585
            |            ..||.||||                    |||       |||     |||||         
Sbjct 1629  T------------GGATTTTCT--------------------TTC-------CCT-----TATTC---------  1649

Query 1586  TAACAGACTACTCAGTACCATTCCACCATACGCCAATATCAAGCATGTCATCAGATTTGCCAGGAGAACAAAGA  1659
                        ||||                                                          
Sbjct 1650  ------------CAGT----------------------------------------------------------  1653

Query 1660  AGAAATGATATTAATAATGAACTGAAGCTTGGAACATCTTCTGATACTGTGCAACAG  1716
                                                                     
Sbjct 1654  ---------------------------------------------------------  1653

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