Nucleotide Global Alignment
Description
- Query:
- TRCN0000477269
- Subject:
- XM_006508227.3
- Aligned Length:
- 1948
- Identities:
- 1512
- Gaps:
- 185
Alignment
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1 ATGGAGTCCCCGGGAGGCTCCGCCCCCCTGCTCGGGCTGGAGCTTTGCGCGGCCGCTAGGGACTCGGCGGCCAT 74
Query 3 GGCGGGGCCGGGCGTC---------CCCGGTGCCCCCGCAGCGCGCTGGAAACGCCACATCGTGCGGCAGCTGC 67
|||.||.||.||||.| |||.|.||.|||||.||...||||||.||||||||||||||||||||||
Sbjct 75 GGCAGGACCTGGCGCCCCCTGCGATCCCTGCGCGCCCGCCGCTGTCTGGAAGCGCCACATCGTGCGGCAGCTGC 148
Query 68 GGCTTCGGGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGGTGCCGGCCTATAACCATCTCTTAGAGAAGGCT 141
|||.|||||||||.||||||||||||||.|||||||||||.||||||||.||||||||||||.|||||||||||
Sbjct 149 GGCATCGGGACCGCACGCAAAAGGCGCTCTTCCTGGAGCTAGTGCCGGCTTATAACCATCTCCTAGAGAAGGCT 222
Query 142 GAGCTGCTGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCAAACAGTGTCACTC-CCACCACCCACCAGGGCC 214
||.|||||.|.||||||||||.|.|||.||.||.|.||.|||||...||.|| || |||||...||..|||.|.
Sbjct 223 GAACTGCTAGCCAAGTTCTCAGAAAAGTTGAAGTCCGAACCAAAGGATGCCA-TCTCCACCCGACATGAGGACT 295
Query 215 CCTGGGAGGAG---TCAGAGCTTGACTCAGACCAAGTCCCATCACTGGTCGCACTGAGGGTGAAGTGGCAGGAG 285
...|||||||| ||||.|...|.|.|.|||||||||.||||||..|.|.|.||||||||||||||||||.||
Sbjct 296 GGAGGGAGGAGGTCTCAGGGACAGGCCCTGACCAAGTCTCATCACCAGCCTCTCTGAGGGTGAAGTGGCAGCAG 369
Query 286 GAGGAGGAGGGGCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGGAGAAGGGCGCGGCCCTGGGCAC 359
|||.||.|||||||.|.||||||||||||||||||||||||||||||||||.|||||.||||.|||||.|.|||
Sbjct 370 GAGAAGAAGGGGCTGCAGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGAAGAAGAGCGCAGCCCTAGACAC 443
Query 360 GCTGGAGTCGGAGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTGGAGGCCCGCGTGGCGCAGCTGCGAGAGG 433
.|||.||||..|||||.||.||.||||...||||.|||.|||||||.|||||.||||||.||||||.|..||||
Sbjct 444 CCTGCAGTCACAGCTGGAGGAGCGGCAGGACAGGTTGGAAGCCCTGCAGGCCTGCGTGGTGCAGCTACAGGAGG 517
Query 434 CGCGGGCGCAGCAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAATGCGGTGCAGCGGGCAGCCTACGAGGCG 507
|||||||.||||||.|||.||||.|||||||..|||..|||.||||.||.|..|||.|.|.||||||.|||.||
Sbjct 518 CGCGGGCTCAGCAGTCCCGGCAGCTGGAGGAACGGCAAGCGGAGAACGCAGCACAGAGAGAAGCCTATGAGACG 591
Query 508 CTGCGCGCGCACGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCGCGCGACCTGCTGGAGAG 581
||||.|..|||.|..|.||.||.|||||||||||||||||||||||||||||||||.||||||.||||||||..
Sbjct 592 CTGCTCCAGCAAGCTGTGCACCAGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCACGCGACTTGCTGGAGCA 665
Query 582 GCTCGTGCAGCGCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGCAACGAGCGCCGGGAGCGGGCCAAGCAGG 655
|||.||||||||.||||||||||||||.||.||||||||.||.||.||.|||||..|.|||.|||||||.||||
Sbjct 666 GCTTGTGCAGCGTAAGGCGCGCGCCGCCGCTGAGCGCAATCTACGTAATGAGCGTAGAGAGAGGGCCAACCAGG 739
Query 656 CGCGGGTGTCCCAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAGCATCAGCGAGGGCCCGGACACCCTAGGC 729
|.|.|||||||||||||||||||||.||.||.||||||||.|||||||||||||||..|||..||||.||||..
Sbjct 740 CTCTGGTGTCCCAGGAGCTGAAGAAAGCGGCTAAGCGGACTGTGAGCATCAGCGAGATCCCAAACACTCTAGAA 813
Query 730 GATTGGATGAGGGAGAGAAGGGAGACTCTGGCTCTGGCCCCTG------AGCCAGAGCCCCTGGAGAAGGAAGC 797
|||.||| .||.|||| ||||||.|||||||.||.|||| .|||.|||..|...||||..||..|
Sbjct 814 GATGGGA----CGAAAGAA--GAGACTGTGGCTCTAGCTCCTGCCGCTCTGCCTGAGTTCTCAGAGAGTGAGAC 881
Query 798 TTGTGAGAAGTGGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACGCTGTCCCACTGTGTGGATGTGG 871
||||||.||.|||||||||||.||||||||||||||.||||||||||||||.|||||||.||||||||||||||
Sbjct 882 TTGTGAAAAATGGAAGAGGCCTTTCAGGTCTGCCTCGGCCACCTCCCTGACACTGTCCCGCTGTGTGGATGTGG 955
Query 872 TGAAGGGGCTTCTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGCCCCTGAGCAGCGATACCAGATC 945
||||||||||..||||.||.|||||.||.|||||||||||..|||||||.||.|||||||||||.|||||.|.|
Sbjct 956 TGAAGGGGCTGTTGGACTTCAAGAAAAGAAGAGGTCACTCGGTTGGGGGCGCACCTGAGCAGCGGTACCAAAGC 1029
Query 946 ATCCCTGTGTGTGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGGATGCCCACCTCTCTGAGGTCAA 1019
|||||||||||||||.||||||.|.||||..|||.||||||||||||..||||||||||.||||||||||||||
Sbjct 1030 ATCCCTGTGTGTGTGTCTGCCCAAATTCCCTCCCAGGCTCAGGATGTCTTGGATGCCCATCTCTCTGAGGTCAA 1103
Query 1020 TGCTGTTCGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGCCTGATCCACCTCTGGAATG 1093
|||||||.||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1104 TGCTGTTTGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGGCTGATCCACCTCTGGAATG 1177
Query 1094 TTGTGGGAAGTCGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAGCATCACCAGTGTGGACTTTGAC 1167
||||.|||.||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||
Sbjct 1178 TTGTAGGAGGTCGCCTGGAGGCCAACCAGACCCTGGAAGGAGCTGGCGGCAGCATCACCAGTGTGGATTTTGAC 1251
Query 1168 CCCTCGGGCTACCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGGGAGGCACAGTC 1241
|||||.||||.|||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||.|.|||||
Sbjct 1252 CCCTCAGGCTCCCAGGTTTTGGCAGCTACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGAGAGACTCAGTC 1325
Query 1242 CAAGGAGACACTGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAGCTAACGAGGCACCAGGCAGTGA 1315
||||||.|||.||||.|||||||||||.||.|||||.||||||||||||||||||||.||||||||||||||||
Sbjct 1326 CAAGGAAACATTGTCCGGACACAAGGACAAAGTGACTGCTGCCAAATTCAAGCTAACAAGGCACCAGGCAGTGA 1399
Query 1316 CTGGGAGCCGCGACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATTGCTCCAGGACCATCAATGTCCTT 1389
||||||||||.||||||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||.|||
Sbjct 1400 CTGGGAGCCGAGACCGGACAGTGAAGGAGTGGGACCTGGGCCGCGCCTACTGTTCCAGGACTATCAATGTACTT 1473
Query 1390 TCCTACTGTAATGACGTGGTGTGTGGGGACCATATCATCATTAGTGGCCACAATGACCAGAAGATCCGGTTCTG 1463
||||||||.||||||||||||||.||||||||.||||||||.|||||||||||||||||.||||||||||||||
Sbjct 1474 TCCTACTGCAATGACGTGGTGTGCGGGGACCACATCATCATCAGTGGCCACAATGACCAAAAGATCCGGTTCTG 1547
Query 1464 GGACAGCAGGGGGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTCACCTCCCTGAGCCTCAGCCACG 1537
||||||||||||.||.|||||||.||||||||||||.||||||||||||||.|||||||||..|||||||.|.|
Sbjct 1548 GGACAGCAGGGGCCCTCACTGCATCCAGGTCATCCCCGTGCAGGGCCGGGTTACCTCCCTGCACCTCAGCTATG 1621
Query 1538 ACCAACTGCACCTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGACCTGCGTGTCAGCAACATCCGC 1611
||||.|||||.|||||.|||||||||||||||||||||||||||||.|||||||||||..|||||||.|||||.
Sbjct 1622 ACCAGCTGCATCTGCTTAGCTGTTCCCGAGACAACACACTCAAGGTTATCGACCTGCGAATCAGCAATATCCGA 1695
Query 1612 CAGGTGTTCAGGGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTGTGTTCAGCCCGGACAGAAGCTA 1685
||||||||||||||.||||||||||||||..|||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1696 CAGGTGTTCAGGGCAGATGGCTTCAAGTGCAGTTCTGACTGGACCAAAGCTGTGTTCAGCCCTGACAGAAGCTA 1769
Query 1686 TGCACTGGCAGGCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACCGGGAAACTGGAGAGCAGACTAC 1759
|||||||||||||||.|...|.||.|.|||.|||||||||||||||.||||||||||||||||||.|||.||||
Sbjct 1770 TGCACTGGCAGGCTCTTCAAACGGCGACCTGTACATCTGGGATGTGAACACCGGGAAACTGGAGACCAGCCTAC 1843
Query 1760 AGGGACCCCATTGCGCTGCCGTCAACGCCGTGGCCTGGTGCTACTCCGGGAGCCACATGGTGAGCGTGGACCAG 1833
||||||||||.
Sbjct 1844 AGGGACCCCAC--------------------------------------------------------------- 1854
Query 1834 GGCAGGAAGGTTGTGCTCTGGCAG 1857
Sbjct 1855 ------------------------ 1854