Nucleotide Global Alignment

Description

Query:
TRCN0000477269
Subject:
XR_378274.3
Aligned Length:
2346
Identities:
1582
Gaps:
501

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGAGGCTTCAATCCCTGCTGCTTACTCCGGGACAGAAACGCACACCTCTGGGACTGAGGGTTTTTGCTGGGCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGCAGCACCTGCTTTGAGGTGTCCAGATCTCCCCGACAAAAGCGCTTGGTACAGCCCGGGGATTCCCCGCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCCGCCCTGACGTCATGGAGTCCCCGGGAGGCTCCGCCCCCCTGCTCGGGCTGGAGCTTTGCGCGGCCGCTAG  222

Query    1  -------------ATGGCGGGGCCGGGCGTC---------CCCGGTGCCCCCGCAGCGCGCTGGAAACGCCACA  52
                         |||||.||.||.||||.|         |||.|.||.|||||.||...||||||.|||||||
Sbjct  223  GGACTCGGCGGCCATGGCAGGACCTGGCGCCCCCTGCGATCCCTGCGCGCCCGCCGCTGTCTGGAAGCGCCACA  296

Query   53  TCGTGCGGCAGCTGCGGCTTCGGGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGGTGCCGGCCTATAACCAT  126
            ||||||||||||||||||.|||||||||.||||||||||||||.|||||||||||.||||||||.|||||||||
Sbjct  297  TCGTGCGGCAGCTGCGGCATCGGGACCGCACGCAAAAGGCGCTCTTCCTGGAGCTAGTGCCGGCTTATAACCAT  370

Query  127  CTCTTAGAGAAGGCTGAGCTGCTGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCAAACAGTGTCACTC-CCA  199
            |||.|||||||||||||.|||||.|.||||||||||.|.|||.||.||.|.||.|||||...||.|| || |||
Sbjct  371  CTCCTAGAGAAGGCTGAACTGCTAGCCAAGTTCTCAGAAAAGTTGAAGTCCGAACCAAAGGATGCCA-TCTCCA  443

Query  200  CCACCCACCAGGGCCCCTGGGAGGAG---TCAGAGCTTGACTCAGACCAAGTCCCATCACTGGTCGCACTGAGG  270
            ||...||..|||.|....||||||||   ||||.|...|.|.|.|||||||||.||||||..|.|.|.||||||
Sbjct  444  CCCGACATGAGGACTGGAGGGAGGAGGTCTCAGGGACAGGCCCTGACCAAGTCTCATCACCAGCCTCTCTGAGG  517

Query  271  GTGAAGTGGCAGGAGGAGGAGGAGGGGCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGGAGAAGGG  344
            ||||||||||||.|||||.||.|||||||.|.||||||||||||||||||||||||||||||||||.|||||.|
Sbjct  518  GTGAAGTGGCAGCAGGAGAAGAAGGGGCTGCAGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGAAGAAGAG  591

Query  345  CGCGGCCCTGGGCACGCTGGAGTCGGAGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTGGAGGCCCGCGTGG  418
            |||.|||||.|.|||.|||.||||..|||||.||.||.||||...||||.|||.|||||||.|||||.||||||
Sbjct  592  CGCAGCCCTAGACACCCTGCAGTCACAGCTGGAGGAGCGGCAGGACAGGTTGGAAGCCCTGCAGGCCTGCGTGG  665

Query  419  CGCAGCTGCGAGAGGCGCGGGCGCAGCAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAATGCGGTGCAGCGG  492
            .||||||.|..|||||||||||.||||||.|||.||||.|||||||..|||..|||.||||.||.|..|||.|.
Sbjct  666  TGCAGCTACAGGAGGCGCGGGCTCAGCAGTCCCGGCAGCTGGAGGAACGGCAAGCGGAGAACGCAGCACAGAGA  739

Query  493  GCAGCCTACGAGGCGCTGCGCGCGCACGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCGCG  566
            |.||||||.|||.||||||.|..|||.|..|.||.||.|||||||||||||||||||||||||||||||||.||
Sbjct  740  GAAGCCTATGAGACGCTGCTCCAGCAAGCTGTGCACCAGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCACG  813

Query  567  CGACCTGCTGGAGAGGCTCGTGCAGCGCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGCAACGAGCGCCGGG  640
            ||||.||||||||..|||.||||||||.||||||||||||||.||.||||||||.||.||.||.|||||..|.|
Sbjct  814  CGACTTGCTGGAGCAGCTTGTGCAGCGTAAGGCGCGCGCCGCCGCTGAGCGCAATCTACGTAATGAGCGTAGAG  887

Query  641  AGCGGGCCAAGCAGGCGCGGGTGTCCCAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAGCATCAGCGAGGGC  714
            ||.|||||||.|||||.|.|||||||||||||||||||||.||.||.||||||||.|||||||||||||||..|
Sbjct  888  AGAGGGCCAACCAGGCTCTGGTGTCCCAGGAGCTGAAGAAAGCGGCTAAGCGGACTGTGAGCATCAGCGAGATC  961

Query  715  CCGGACACCCTAGGCGATTGGATGAGGGAGAGAAGGGAGACTCTGGCTCTGGCCCCTG------AGCCAGAGCC  782
            ||..||||.||||..|||.|||    .||.||||  ||||||.|||||||.||.||||      .|||.|||..
Sbjct  962  CCAAACACTCTAGAAGATGGGA----CGAAAGAA--GAGACTGTGGCTCTAGCTCCTGCCGCTCTGCCTGAGTT  1029

Query  783  CCTGGAGAAGGAAGCTTGTGAGAAGTGGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACGCTGTCCC  856
            |...||||..||..|||||||.||.|||||||||||.||||||||||||||.||||||||||||||.|||||||
Sbjct 1030  CTCAGAGAGTGAGACTTGTGAAAAATGGAAGAGGCCTTTCAGGTCTGCCTCGGCCACCTCCCTGACACTGTCCC  1103

Query  857  ACTGTGTGGATGTGGTGAAGGGGCTTCTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGCCCCTGAG  930
            .||||||||||||||||||||||||..||||.||.|||||.||.|||||||||||..|||||||.||.||||||
Sbjct 1104  GCTGTGTGGATGTGGTGAAGGGGCTGTTGGACTTCAAGAAAAGAAGAGGTCACTCGGTTGGGGGCGCACCTGAG  1177

Query  931  CAGCGATACCAGATCATCCCTGTGTGTGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGGATGCCCA  1004
            |||||.|||||.|.||||||||||||||||.||||||.|.||||..|||.||||||||||||..||||||||||
Sbjct 1178  CAGCGGTACCAAAGCATCCCTGTGTGTGTGTCTGCCCAAATTCCCTCCCAGGCTCAGGATGTCTTGGATGCCCA  1251

Query 1005  CCTCTCTGAGGTCAATGCTGTTCGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGCCTGA  1078
            .|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 1252  TCTCTCTGAGGTCAATGCTGTTTGTTTTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGGCTGA  1325

Query 1079  TCCACCTCTGGAATGTTGTGGGAAGTCGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAGCATCACC  1152
            |||||||||||||||||||.|||.||||||||||||||||||||||||||||.||||||||.||||||||||||
Sbjct 1326  TCCACCTCTGGAATGTTGTAGGAGGTCGCCTGGAGGCCAACCAGACCCTGGAAGGAGCTGGCGGCAGCATCACC  1399

Query 1153  AGTGTGGACTTTGACCCCTCGGGCTACCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCTGGAAGGT  1226
            ||||||||.|||||||||||.||||.|||||||||.|||||.||||||||||||||||||||||||||||||||
Sbjct 1400  AGTGTGGATTTTGACCCCTCAGGCTCCCAGGTTTTGGCAGCTACTTACAACCAGGCTGCCCAGCTCTGGAAGGT  1473

Query 1227  GGGGGAGGCACAGTCCAAGGAGACACTGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAGCTAACGA  1300
            |||.|||.|.|||||||||||.|||.||||.|||||||||||.||.|||||.||||||||||||||||||||.|
Sbjct 1474  GGGAGAGACTCAGTCCAAGGAAACATTGTCCGGACACAAGGACAAAGTGACTGCTGCCAAATTCAAGCTAACAA  1547

Query 1301  GGCACCAGGCAGTGACTGGGAGCCGCGACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATTGCTCCAGG  1374
            |||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||.||.||||||
Sbjct 1548  GGCACCAGGCAGTGACTGGGAGCCGAGACCGGACAGTGAAGGAGTGGGACCTGGGCCGCGCCTACTGTTCCAGG  1621

Query 1375  ACCATCAATGTCCTTTCCTACTGTAATGACGTGGTGTGTGGGGACCATATCATCATTAGTGGCCACAATGACCA  1448
            ||.||||||||.|||||||||||.||||||||||||||.||||||||.||||||||.|||||||||||||||||
Sbjct 1622  ACTATCAATGTACTTTCCTACTGCAATGACGTGGTGTGCGGGGACCACATCATCATCAGTGGCCACAATGACCA  1695

Query 1449  GAAGATCCGGTTCTGGGACAGCAGGGGGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTCACCTCCC  1522
            .||||||||||||||||||||||||||.||.|||||||.||||||||||||.||||||||||||||.|||||||
Sbjct 1696  AAAGATCCGGTTCTGGGACAGCAGGGGCCCTCACTGCATCCAGGTCATCCCCGTGCAGGGCCGGGTTACCTCCC  1769

Query 1523  TGAGCCTCAGCCACGACCAACTGCACCTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGACCTGCGT  1596
            ||..|||||||.|.|||||.|||||.|||||.|||||||||||||||||||||||||||||.|||||||||||.
Sbjct 1770  TGCACCTCAGCTATGACCAGCTGCATCTGCTTAGCTGTTCCCGAGACAACACACTCAAGGTTATCGACCTGCGA  1843

Query 1597  GTCAGCAACATCCGCCAGGTGTTCAGGGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTGTGTTCAG  1670
            .|||||||.|||||.||||||||||     ||||||||||||||..||||||||||||||||||||||||||||
Sbjct 1844  ATCAGCAATATCCGACAGGTGTTCA-----GATGGCTTCAAGTGCAGTTCTGACTGGACCAAAGCTGTGTTCAG  1912

Query 1671  CCCGGACAGAAGCTATGCACTGGCAGGCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACCGGGAAAC  1744
            |||.||||||||||||||||||||||||||.|...|.||.|.|||.|||||||||||||||.||||||||||||
Sbjct 1913  CCCTGACAGAAGCTATGCACTGGCAGGCTCTTCAAACGGCGACCTGTACATCTGGGATGTGAACACCGGGAAAC  1986

Query 1745  TGGAGAGCAGACTACAGGGACCCCATTGCGCTGCCGTCAACGCCGTGGCCTGGTGCTACTCCGGGAGCCACATG  1818
            ||||||.|||.||||||||||||||.|||.||||.||.||.||||||||.|||||||.||||||||.||||.|.
Sbjct 1987  TGGAGACCAGCCTACAGGGACCCCACTGCACTGCTGTTAATGCCGTGGCTTGGTGCTTCTCCGGGAACCACGTT  2060

Query 1819  GTGAGCGTGGACCAGGGCAGGAAGGTTGTGCTCTGGCAG-----------------------------------  1857
            |||||.||||||||.|||||||||||.|||||||||||.                                   
Sbjct 2061  GTGAGTGTGGACCAAGGCAGGAAGGTGGTGCTCTGGCACTGAGTGGCACAAGTTCCCTGTATGGGTTGGACTCT  2134

Query 1858  --------------------------------------------------------------------------  1857
                                                                                      
Sbjct 2135  GAAGCCAGAAGCCAGAGAACAGCTTCCCTGTGCTCAGGACTCCAGAGCTGGGGTTGGGGTCTACTACAGAATTC  2208

Query 1858  --------------------------------------------------------------------------  1857
                                                                                      
Sbjct 2209  ATGTGAGGGCCAGGCAGGACCTGGCCTGTTTGTTAAAAATCAAAGTGTGGGTTAGGAACTACAGTTTTGTTTTT  2282

Query 1858  ----------------------------------------------------  1857
                                                                
Sbjct 2283  TAAAATCTATTTGTTTACTCTCTTCAGTGTTAAAAACTGTATCTAAGCCGTG  2334

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