Nucleotide Global Alignment
Description
- Query:
- TRCN0000477460
- Subject:
- XR_001780018.1
- Aligned Length:
- 4256
- Identities:
- 864
- Gaps:
- 3286
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGAAGCCTGAGTGAGCCTGACAGGTGGGCTGAGCAGCGGCTGCCAGGGCAGCGCGTGCTGCTCAGGTTTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCCACCGAGGGCAGGGCAACGCCAGCCCTGGTGGCGACGCCTCGTGAGCGTGGGCAGCGGAGGAGGGAGCGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGTGAGCCCTACGCTAGGCAGCTGCGACAGGCGGCGGGCGTGCGGCTCTCAGCCAGCCTGAATCCCATTGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCGGGACGCGCTCCGAGCTGCTCCTCTCCCCCAGGGCGCAGAGGCTGCCCACTGGTCCGCGAGCTCGGTTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAATTCTTTGCCTGGCTAGCAAGGAGAGCAAGACTGGGCTCTGGCGACTCCCTAGAGCACGCTTCATGGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCAGGGAGGAGAAACCCAGGGATGACAGGCAGAAGGCAACACGGGCACTGACAGGACTCCAAGAAGGCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGCCACCAGCAGCCAGATGAACAGGCTGGGTCAAATGCTCTAGCTAGGTGCATGCGCCTGGTGGAGCGCGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTCGGACTGTGCTCTCCGCGGTCCGCCCTGCGCTGGTGCCCGGCCGGTACCAGGATGGGCACTGGAGCCCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCGCGCCCGCTACAGCCCGGCGTCCCTCCTGCGTCCTGAGCTCATGGACGGCGACTCCAGGCTGGCAGCGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGCCCCCGGGCTGTGAATGCGACTCGCTCATCGTCCGCGCTCCCCGCCCGCCCGCCCGCCGGGACGTGGTAGG 740
Query 1 --ATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCCTGGTCACCTGCTGCCTGATGGTG 72
|||||.||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 741 GGATGCCTAGCTCCTCTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCTTGGTCACCTGCTGCCTGATGGTG 814
Query 73 GCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAGGCACCAGAGCAGCCGGGCCAGGAGAAGCGTGA 146
|||||||||||||||||||||||||||||||||||||||||.||.||.|||||.||.||||||||||||||.||
Sbjct 815 GCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGA 888
Query 147 GCACGCCTCTCGGGACGGCCCGGGGCGGGTGAACGAGCTCGGGCGCCCGGCGAGGGACGAGGGCGGCAGCGGCC 220
||||||.|||||||||.|||||||||||||||.|||||||||||||.|..||||||||||||||.||||.|.||
Sbjct 889 GCACGCGTCTCGGGACAGCCCGGGGCGGGTGAGCGAGCTCGGGCGCGCCTCGAGGGACGAGGGCAGCAGTGCCC 962
Query 221 GGGACTGGAAGAGCAAGAGCGGCCGTGGGCTCGCCGGCCGTGAGCCGTGGAGCAAGCTGAAGCAGGCCTGGGTC 294
|||||||||||||||||.||.||||.|.||||.|.|||||.|||.||||||||||||.|||||||||||||| |
Sbjct 963 GGGACTGGAAGAGCAAGGGCAGCCGCGCGCTCTCGGGCCGGGAGGCGTGGAGCAAGCAGAAGCAGGCCTGGG-C 1035
Query 295 T-CCCAGGGCGGGGGCGCCAAGGCCGGGGATCT-GCAGGTCCGGCCCCGCGGGGACACCCCGCAGGCGGAAGCC 366
| |||||||||||.||||||||||||.||| || ||||||||||||.||||||||.|||||.||||.|||..||
Sbjct 1036 TGCCCAGGGCGGGAGCGCCAAGGCCGCGGA-CTGGCAGGTCCGGCCTCGCGGGGATACCCCACAGGGGGAGCCC 1108
Query 367 CTGGCCGCAGCCGCCCAGGACGCGATTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTGTA 440
|.|||| |||||||||||.||.||..|||.||||||||..|||||.||.||||..||.|||||.||||..||
Sbjct 1109 CCGGCC---GCCGCCCAGGAAGCTATCAGCCTGGAACTCGTTCCCACACCGGAGCTGCCTGAGGAATACGCCTA 1179
Query 441 CCCGGACTACCGTGGCAAGGGCTGCGTGGACGAGAGCGGCTTCGTGTACGCGATCGGGGAGAAGTTCGCGCCGG 514
||||||||||||.||.||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.||.|
Sbjct 1180 CCCGGACTACCGCGGGAAGGGCTGTGTGGACGAGAGTGGCTTCGTGTATGCGATCGGGGAGAAGTTCGCCCCAG 1253
Query 515 GCCCCTCGGCCTGCCCGTGCCTGTGCACCGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGCAC 588
|.|||||.|||||||||||.|||||.||.|||||||||||.||.|||||.|||||.||||||||..||||.|||
Sbjct 1254 GTCCCTCAGCCTGCCCGTGTCTGTGTACGGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCAC 1327
Query 589 CCGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCAAGGAGAGGAAGAACTACTGCGAGTTCCG 662
||||||||||||||||||||||..|||||||||||.||||||||||||||||.|||||||||||||||||||||
Sbjct 1328 CCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAAGAACTACTGCGAGTTCCG 1401
Query 663 GGGCAAGACCTATCAGACTTTGGAGGAGTTCGTGGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTG 736
||||||||||||.|||||||||||||||||.||||||||||||||.||..||||.||||||||||||||.||||
Sbjct 1402 GGGCAAGACCTACCAGACTTTGGAGGAGTTTGTGGTGTCTCCATGTGAACGGTGCCGCTGTGAAGCCAATGGTG 1475
Query 737 AGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGTGTGTGGACCCTGTGTACGAGCCTGATCAGTGCTGT 810
|.|||||.|||||||||||.|||||||||||||||||.|||||||||||.||.||.|||||||||||||||||.
Sbjct 1476 AAGTGCTGTGCACAGTGTCGGCGTGTCCCCAGACGGAATGTGTGGACCCCGTATATGAGCCTGATCAGTGCTGC 1549
Query 811 CCCATCTGCAAAAATGGTCCAAACTGCTTTGCAGAAACCGCGGTGATCCCTGCTGGCAGAGAAGTGAAGACTGA 884
||.|||||||||||.||||||||||||||||||||||||||.||.|||||.|||||.|||||.|||||||||||
Sbjct 1550 CCGATCTGCAAAAACGGTCCAAACTGCTTTGCAGAAACCGCTGTAATCCCAGCTGGTAGAGAGGTGAAGACTGA 1623
Query 885 CGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGAC 958
|||||||||||||||.|||||.||||||||.||.|||||.||||||||.||.|||||.||||||||||||||||
Sbjct 1624 CGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGAC 1697
Query 959 ATGAATGCAGGCAAATG--------------------------------------------------------- 975
||||.|||||.||||||
Sbjct 1698 ATGAGTGCAGACAAATGTAGACTTCACAATACAGAAACTCTCATGTTTTTCTAGAATATTTTACTAATGTGACA 1771
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1772 TTCTAGATGACTCTGAGAAATATCAATCAAAAACAGAAGACTTTGGATAAGGAGTCAAGGAAAATGGTTGGTAC 1845
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1846 TTTTGTTTTTCTTGGTAACAAATACAGCAAGAGACAGAAATGGATGTATTTCAAAACATCAATAAGAACTTTGG 1919
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1920 GCATACTCCCTCTCTAAATAAATGTGCTATTTTCACAGGAAAGGCAAGAACAGTCATTTCAGAAGCCTTGCTTC 1993
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1994 ACCCCCAAATACAGCAATCATCACAAGATGCATTGGGGCCCTGTGACAGGTATGCAGAAAGGCCAGAATGTCTG 2067
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2068 TGCCTTCAAGGAACTCACATGCCTCAGGTGGAGCCATAAAGTGATTATATTAATTTTAATATTTAAATATTCAC 2141
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2142 AGTATCATTGTCTGATCTGATAAAGTACACCAAGAGATTAAGATTAATTCTCATATGTTTTAAAGTTTAATATA 2215
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2216 TTTATGCTGAACTACCTCTCCTCTTTGCTTCCTTAGCACTGTATGGAAACAATGTCTAAAACACTCTTAACTAT 2289
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2290 GTCAAAAATTCAGAGATTTCCTATTCTTTGTTTTTATTTTAAACAATGAGATATGTTTAATGTTCATCTTGTTT 2363
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2364 AAAGCATACAAATGCACAATTTAAACCAAAAATTGTTGAAAAACAAGCATGTTATTTTAAATATAGACTATTTA 2437
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2438 AGCATACATAAAACAAAATTATAAACAAAGAATAATTTAACAAATACTAACAATCTATTAACTTTGTTTCAATA 2511
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2512 GGCAACAGATAATTTTAGATTTCTAAAGACTTTTTGTTTTTCTCTAAAATGCTGTAAGGAGGAAGGGTAATAAT 2585
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2586 GTACATGTCTTTTCATCAAGATCCTGGGCAGTACCTGAAGTATAGAAAAGTCTGACTGGTAACAGACTTTGGCA 2659
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2660 GTACCTTCTGTGACCTGAGCTTCTTGGTGGACCTGCTCTGCACTCTTCTCAGTAGTAGTATCTGAGAGAAGATG 2733
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2734 CTCTATGCAGTCACTGACTCTGGAATGAATCCATGCTACAGTATCTGTTCATCGAATTCCAGGCTCTTCCCGCC 2807
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2808 TCGGGGAGATAGGAGACTACTTACATCATCTCCTCATTCAAAGTTAGCTTCTTCCATCTGAGGTTTTAGCTTTC 2881
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2882 TAAACATGGATCTTGTTTTCATTTGATTGTTTGGAGGATCCTAATTGCACAGAACAACCAACCTTCCTCAGAAG 2955
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2956 AGTTGTCTTTAAAAACAGCCTGGGGCTATGAGAGGACACAGTCCTGTTAGCAGTAGGTACTGGGCACCCAGACC 3029
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3030 CTTCTCGAAGGGGTTCTAAGTACTGTTCTTCTCTAAGCATTTTCAGTACTGAAGGTCTCAAATTGGGGGTCAAA 3103
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3104 GGGACACTAAGATGAATTGCTCTGAGTAAAGAGGTTATTGGGAAATTTATGAATGCTGAGGACAGGGAGACAGT 3177
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3178 TGGGAACAGCATGACAGAGCCTCTGAGGAAACCCGAGACAGTCTGCAACACCAGAGACAGACACCATGGTGGGT 3251
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3252 GTTCTGAAGAAAGGAAACCATAATCCTAGCAGTAGACTGAGAATGAGAGTTTCTTCTTACGGGGCTCCCTTTGG 3325
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3326 GGGAGGGGAGCCATCAGAGTATAAGTCTCCAGCTAGGTTCTGATTCATACTGGGGGGGGGGGTCACCTCCCCCA 3399
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3400 CTGCTGCCCCTGCCACCACAATTTGATGTAAACTCATTCCCCAGGTGACAGATCCTGGAACCTGCCAGCTCTTA 3473
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3474 GCTAGGGACTCACCCTGTCTCTTTTGGACACCTGTAGGAGTTTGTGAAAAAGGAACAGCTGCTTCGAGGAGGAT 3547
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3548 TCTACACTCCTTAATTGGATTGCCACCCTGAGTCCCTGTCATAGCAGTAATTTGGTGTCATTTTAGCACATACA 3621
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3622 TGAAAAATTACATCCTAAGTCGAGTTTGTAGGAGGCTAAGTGGAAGCGTGCTTGACTAGCATGCACGAAAACCT 3695
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3696 GGGGTTTTTTATCTTTAGGACTACTACATACATAAATATATCATTTAATGGGTAGGGTATACCTCAATGGTAAA 3769
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3770 GAAATTTCACATGCAGAAAGCCCCAGTTCAATCTAGTCTGGTATGGAAAAAAAAGTTTGTTCACAGCTAACGGT 3843
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3844 TAATTTTTTTGTGTTTTCCTCTTATTTCTAGATACCTTTAATTCATATTATGAGACAATCACTTCTGCAAGCAT 3917
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3918 CACCTACTCAATGCTGAGTTCACTTTACTGAATCACATCCAGTCCACTACACCTGTGGACCAAGCACTGGCTCA 3991
Query 976 -------------------------------------------------------------------------- 975
Sbjct 3992 AACAGTGCATCAAACCAAAGTTCCCACTGTTGTCTCCCTGCCTGTTTTTTTTTTCCCAGAGTTTTAGCATATTT 4065
Query 976 -------------------------------------------------------------------------- 975
Sbjct 4066 CACACATCTAGGCCATGACCATCCACAGATCAAATCCCTCACTGCTGTCATGGTTAAGGTTAGATGTGACAATC 4139
Query 976 -------------------------------------------------------------------------- 975
Sbjct 4140 AATGGTCAGTTCTGATGAAAGTCAAGACTAATTGCTTTGATGTAAAAGTTCTAATACTGAAGGAAACTTCTAAT 4213
Query 976 -------------------------------------- 975
Sbjct 4214 GAAAACCGTGGTACTTATAATAAAGGTGATCAAGTTTA 4251
