Nucleotide Global Alignment
Description
- Query:
- TRCN0000477460
- Subject:
- XR_380971.2
- Aligned Length:
- 2338
- Identities:
- 864
- Gaps:
- 1368
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGGAAGCCTGAGTGAGCCTGACAGGTGGGCTGAGCAGCGGCTGCCAGGGCAGCGCGTGCTGCTCAGGTTTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCCACCGAGGGCAGGGCAACGCCAGCCCTGGTGGCGACGCCTCGTGAGCGTGGGCAGCGGAGGAGGGAGCGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGTGAGCCCTACGCTAGGCAGCTGCGACAGGCGGCGGGCGTGCGGCTCTCAGCCAGCCTGAATCCCATTGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCGGGACGCGCTCCGAGCTGCTCCTCTCCCCCAGGGCGCAGAGGCTGCCCACTGGTCCGCGAGCTCGGTTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAATTCTTTGCCTGGCTAGCAAGGAGAGCAAGACTGGGCTCTGGCGACTCCCTAGAGCACGCTTCATGGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCAGGGAGGAGAAACCCAGGGATGACAGGCAGAAGGCAACACGGGCACTGACAGGACTCCAAGAAGGCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGCCACCAGCAGCCAGATGAACAGGCTGGGTCAAATGCTCTAGCTAGGTGCATGCGCCTGGTGGAGCGCGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTCGGACTGTGCTCTCCGCGGTCCGCCCTGCGCTGGTGCCCGGCCGGTACCAGGATGGGCACTGGAGCCCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCGCGCCCGCTACAGCCCGGCGTCCCTCCTGCGTCCTGAGCTCATGGACGGCGACTCCAGGCTGGCAGCGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGCCCCCGGGCTGTGAATGCGACTCGCTCATCGTCCGCGCTCCCCGCCCGCCCGCCCGCCGGGACGTGGTAGG 740
Query 1 --ATGCCCAGCTCCACTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCCTGGTCACCTGCTGCCTGATGGTG 72
|||||.||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 741 GGATGCCTAGCTCCTCTGCGATGGCAGTTGGCGCGCTCTCCAGTTCCCTCTTGGTCACCTGCTGCCTGATGGTG 814
Query 73 GCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAGGCACCAGAGCAGCCGGGCCAGGAGAAGCGTGA 146
|||||||||||||||||||||||||||||||||||||||||.||.||.|||||.||.||||||||||||||.||
Sbjct 815 GCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGA 888
Query 147 GCACGCCTCTCGGGACGGCCCGGGGCGGGTGAACGAGCTCGGGCGCCCGGCGAGGGACGAGGGCGGCAGCGGCC 220
||||||.|||||||||.|||||||||||||||.|||||||||||||.|..||||||||||||||.||||.|.||
Sbjct 889 GCACGCGTCTCGGGACAGCCCGGGGCGGGTGAGCGAGCTCGGGCGCGCCTCGAGGGACGAGGGCAGCAGTGCCC 962
Query 221 GGGACTGGAAGAGCAAGAGCGGCCGTGGGCTCGCCGGCCGTGAGCCGTGGAGCAAGCTGAAGCAGGCCTGGGTC 294
|||||||||||||||||.||.||||.|.||||.|.|||||.|||.||||||||||||.|||||||||||||| |
Sbjct 963 GGGACTGGAAGAGCAAGGGCAGCCGCGCGCTCTCGGGCCGGGAGGCGTGGAGCAAGCAGAAGCAGGCCTGGG-C 1035
Query 295 T-CCCAGGGCGGGGGCGCCAAGGCCGGGGATCT-GCAGGTCCGGCCCCGCGGGGACACCCCGCAGGCGGAAGCC 366
| |||||||||||.||||||||||||.||| || ||||||||||||.||||||||.|||||.||||.|||..||
Sbjct 1036 TGCCCAGGGCGGGAGCGCCAAGGCCGCGGA-CTGGCAGGTCCGGCCTCGCGGGGATACCCCACAGGGGGAGCCC 1108
Query 367 CTGGCCGCAGCCGCCCAGGACGCGATTGGCCCGGAACTCGCGCCCACGCCCGAGCCACCCGAGGAGTACGTGTA 440
|.|||| |||||||||||.||.||..|||.||||||||..|||||.||.||||..||.|||||.||||..||
Sbjct 1109 CCGGCC---GCCGCCCAGGAAGCTATCAGCCTGGAACTCGTTCCCACACCGGAGCTGCCTGAGGAATACGCCTA 1179
Query 441 CCCGGACTACCGTGGCAAGGGCTGCGTGGACGAGAGCGGCTTCGTGTACGCGATCGGGGAGAAGTTCGCGCCGG 514
||||||||||||.||.||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.||.|
Sbjct 1180 CCCGGACTACCGCGGGAAGGGCTGTGTGGACGAGAGTGGCTTCGTGTATGCGATCGGGGAGAAGTTCGCCCCAG 1253
Query 515 GCCCCTCGGCCTGCCCGTGCCTGTGCACCGAGGAGGGGCCGCTGTGCGCGCAGCCCGAGTGCCCGAGGCTGCAC 588
|.|||||.|||||||||||.|||||.||.|||||||||||.||.|||||.|||||.||||||||..||||.|||
Sbjct 1254 GTCCCTCAGCCTGCCCGTGTCTGTGTACGGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCAC 1327
Query 589 CCGCGCTGCATCCACGTCGACACGAGCCAGTGCTGCCCGCAGTGCAAGGAGAGGAAGAACTACTGCGAGTTCCG 662
||||||||||||||||||||||..|||||||||||.||||||||||||||||.|||||||||||||||||||||
Sbjct 1328 CCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAAGAACTACTGCGAGTTCCG 1401
Query 663 GGGCAAGACCTATCAGACTTTGGAGGAGTTCGTGGTGTCTCCATGCGAGAGGTGTCGCTGTGAAGCCAACGGTG 736
||||||||||||.|||||||||||||||||.||||||||||||||.||..||||.||||||||||||||.||||
Sbjct 1402 GGGCAAGACCTACCAGACTTTGGAGGAGTTTGTGGTGTCTCCATGTGAACGGTGCCGCTGTGAAGCCAATGGTG 1475
Query 737 AGGTGCTATGCACAGTGTCAGCGTGTCCCCAGACGGAGTGTGTGGACCCTGTGTACGAGCCTGATCAGTGCTGT 810
|.|||||.|||||||||||.|||||||||||||||||.|||||||||||.||.||.|||||||||||||||||.
Sbjct 1476 AAGTGCTGTGCACAGTGTCGGCGTGTCCCCAGACGGAATGTGTGGACCCCGTATATGAGCCTGATCAGTGCTGC 1549
Query 811 CCCATCTGCAAAAATGGTCCAAACTGCTTTGCAGAAACCGCGGTGATCCCTGCTGGCAGAGAAGTGAAGACTGA 884
||.|||||||||||.||||||||||||||||||||||||||.||.|||||.|||||.|||||.|||||||||||
Sbjct 1550 CCGATCTGCAAAAACGGTCCAAACTGCTTTGCAGAAACCGCTGTAATCCCAGCTGGTAGAGAGGTGAAGACTGA 1623
Query 885 CGAGTGCACCATATGCCACTGTACTTATGAGGAAGGCACATGGAGAATCGAGCGGCAGGCCATGTGCACGAGAC 958
|||||||||||||||.|||||.||||||||.||.|||||.||||||||.||.|||||.||||||||||||||||
Sbjct 1624 CGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGAC 1697
Query 959 ATGAATGCAGGCAAATG--------------------------------------------------------- 975
||||.|||||.||||||
Sbjct 1698 ATGAGTGCAGACAAATGTAGACTTCACAATACAGAAACTCTCATGTTTTTCTAGAATATTTTACTAATGTGACA 1771
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1772 TTCTAGATGACTCTGAGAAATATCAATCAAAAACAGAAGACTTTGGATAAGGAGTCAAGGAAAATGGTTGGTAC 1845
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1846 TTTTGTTTTTCTTGGTAACAAATACAGCAAGAGACAGAAATGGATGTATTTCAAAACATCAATAAGAACTTTGG 1919
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1920 GCATACTCCCTCTCTAAATAAATGTGCTATTTTCACAATACCTTTAATTCATATTATGAGACAATCACTTCTGC 1993
Query 976 -------------------------------------------------------------------------- 975
Sbjct 1994 AAGCATCACCTACTCAATGCTGAGTTCACTTTACTGAATCACATCCAGTCCACTACACCTGTGGACCAAGCACT 2067
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2068 GGCTCAAACAGTGCATCAAACCAAAGTTCCCACTGTTGTCTCCCTGCCTGTTTTTTTTTTCCCAGAGTTTTAGC 2141
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2142 ATATTTCACACATCTAGGCCATGACCATCCACAGATCAAATCCCTCACTGCTGTCATGGTTAAGGTTAGATGTG 2215
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2216 ACAATCAATGGTCAGTTCTGATGAAAGTCAAGACTAATTGCTTTGATGTAAAAGTTCTAATACTGAAGGAAACT 2289
Query 976 -------------------------------------------- 975
Sbjct 2290 TCTAATGAAAACCGTGGTACTTATAATAAAGGTGATCAAGTTTA 2333
