Nucleotide Global Alignment
Description
- Query:
- TRCN0000477547
- Subject:
- XR_001738642.1
- Aligned Length:
- 4025
- Identities:
- 2403
- Gaps:
- 1622
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCCAACTCGGGACTGCCTCAACGCCCGGCGCTGTCTCCTCTGCTACTCTGTTTCGGTGTTTTAGCAGAGGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATAGTGAGGGCGGCACAGTGCCCACGGCATGCCGCTGGACTAAGCGCTAAGCGGGCTTGGGATGATGCGCACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGGGGTCTGAGCCAGCCAAGGGGCCGGGCGCCGCCTGGGGGCGCTGCGGCTGCTGCGGGACGCACCAGGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCGCCCGCAGGCTCCGCCCGAGGAGCAGCCCAGCCACCCCAGGGCCCGGAGGACCAACCGCTTCGACCCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCGGGCGGCGGCAGTGTTGGCCGGCGAGGCGAGGAGGGCCGGGCCGCCACGGTGGGGCGAAAAGCCCTGAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCCTCTCAGTTCCTTCCGGTGCGCCTCCCGCTCGCCCTTGCGGAGGCCCTGAGGGCGGATTCAAGGCCCCGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAAGCCATCTGAGGCGGCGACGACTGTTCTCAGCCCCACGGGAACGCCGCGGACGCAGCGTCCCTCTCCCGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGAAAACAGCCATTCTAGAAAGCTTCAAAAAGGACACACTAGATTTAATTAGAAATGTTAAGATTGCCCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGGATTACCTAGATTTGAGCAAGTTCAGGATGAAGACACCTACCTGGAAAATTTAGCAATACAAAGAAATGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCTGCTTTTTTTGAAAAATATGATCGGAGTGAAATACAAGAGTTACTAACTACTGCACTAGTTAGCTGGTTGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGCCAAAGAGGATGTGCGCTCTCAAGTAGACCTCCCATGTGGAATTATGAGTCAAATGAATAACGTAGGCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCACTGCAATCCTACTGACTCCCGTGGACCCTACTGCCCTCTTAGACTATAGAGAGGTCCATCAAATGATAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAGTTGGCTATTGGAATTTATTGCCTAAATCAAATCCCTTCCATCAGTTTAGAAGCTAATTATGATCAGAGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCTTGTCAATTACCTCCAGCTTATTATGATACCAGAATTGGGCAAATTCTGATCAATATTGACTACATGCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAGCACTATGGCATGGAATATATATGCCCAAAGAAAAACGAGCTAGATTCTCTGAATTGTGGCGTGCCATCAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGACATTGATCCTGATGGAAAACCTCAAACAAATAAAGACATTTTTTCAGAGTTTAGTTCAGCAGGTTTGACTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATATTACAAAGGATCCAGACTTTAATGAAATCTATGATGAAGACGTGAATGAAGATCCAACATATGATCCCAAC 1258
Query 1 ------------------------ATGAAATATGCTGAAAATATTATGCTAAAGTTAACATTCAGTACCACACA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGCCCTGAAGAAACAGCTGTATTTATGAAATATGCTGAAAATATTATGCTAAAGTTAACATTCAGTACCACACA 1332
Query 51 AATTCAACAGTATGAAAATGTCTTTATATTTGAAACAGGCTATTGGCTTACTAATGCTATAAAATATAATCAGG 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AATTCAACAGTATGAAAATGTCTTTATATTTGAAACAGGCTATTGGCTTACTAATGCTATAAAATATAATCAGG 1406
Query 125 ATTATCTTGATATCTGTACCTACCAGAGACTACAGCAAAGATTATATCTTCAAAAAAAGATTATTCAAAAACAC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATTATCTTGATATCTGTACCTACCAGAGACTACAGCAAAGATTATATCTTCAAAAAAAGATTATTCAAAAACAC 1480
Query 199 TTTGAGAAGAAAAAAGATATCAGAAGAGGGATAGGATACCTAAAGTTAATATGTTTTCTGATTCCATTTCTACT 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TTTGAGAAGAAAAAAGATATCAGAAGAGGGATAGGATACCTAAAGTTAATATGTTTTCTGATTCCATTTCTACT 1554
Query 273 GAGTTTAAAGAAGAAAATGAAAGTTCCATATTTAAGTAGTCTGCTTCAGCCTTTTTCAGATGACAAGGTCAAGA 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGTTTAAAGAAGAAAATGAAAGTTCCATATTTAAGTAGTCTGCTTCAGCCTTTTTCAGATGACAAGGTCAAGA 1628
Query 347 CAGAGCGAGAATTGCCTCCATTTATTTATGGAAGAGATTTTAAATGCCAGAATTTTCACTACAAAGAGAATCAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAGAGCGAGAATTGCCTCCATTTATTTATGGAAGAGATTTTAAATGCCAGAATTTTCACTACAAAGAGAATCAA 1702
Query 421 TATTTTCATGTTCATGGAGGAATTGAATTTGATATCAGCACCCCTTCAATTGAGAATGCCTTGGAAGATTTTCA 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TATTTTCATGTTCATGGAGGAATTGAATTTGATATCAGCACCCCTTCAATTGAGAATGCCTTGGAAGATTTTCA 1776
Query 495 GAAAAATTTAGAAAAAATACGAGATTGTGCTGCTAATACATTTATAGAAGATTCAGGATATAAAGAATATTACT 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAAAAATTTAGAAAAAATACGAGATTGTGCTGCTAATACATTTATAGAAGATTCAGGATATAAAGAATATTACT 1850
Query 569 CAATACCAGTCATGGAATTTCATGGAAAAAGCTACTATGTGATCTATTTTGAACTAGAAACTTTCTATCAGCAA 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAATACCAGTCATGGAATTTCATGGAAAAAGCTACTATGTGATCTATTTTGAACTAGAAACTTTCTATCAGCAA 1924
Query 643 CTATATAAGACACAGTGGTGGGGAGCCATAAATGAAATAGTGAACAATCTGAGACTGAAAAGACTTCCACTGAC 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTATATAAGACACAGTGGTGGGGAGCCATAAATGAAATAGTGAACAATCTGAGACTGAAAAGACTTCCACTGAC 1998
Query 717 AGATGCTCAATTACATGAACAATTTAAGAAAAAGCTTGGTTTCAAAAGAGCTATGAAATGCAAGAGTATTCCAT 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGATGCTCAATTACATGAACAATTTAAGAAAAAGCTTGGTTTCAAAAGAGCTATGAAATGCAAGAGTATTCCAT 2072
Query 791 TTGGTATGAAGTCCGCTGTTGAAAGAGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAAAACCTCAAGCTCA 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TTGGTATGAAGTCCGCTGTTGAAAGAGGGTTGTCTGCAGTTTTCCACACATTTAGCCGTAAAACCTCAAGCTCA 2146
Query 865 ACAATCAATGTTTCAGATGAAGCAGGTTATACTATTTTTCATCATGCTGCCCTGCACAACAGAGTTTCTATTAT 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACAATCAATGTTTCAGATGAAGCAGGTTATACTATTTTTCATCATGCTGCCCTGCACAACAGAGTTTCTATTAT 2220
Query 939 ATGTCAACTGTGCAATGCTAACTTCAAGGTCAACCAGAGGCGCTTTGTTACGTTCAGCCAAGGTCCAACACCTC 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATGTCAACTGTGCAATGCTAACTTCAAGGTCAACCAGAGGCGCTTTGTTACGTTCAGCCAAGGTCCAACACCTC 2294
Query 1013 TACACCTTGCTGCACAGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGTGTTCCAAAGCTGATTACACGCTT 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TACACCTTGCTGCACAGGCTTGCTCATTAGAAACAACAGTTTGTCTACTGTGTTCCAAAGCTGATTACACGCTT 2368
Query 1087 TCTGAAAAAAGAGGCTGGATGCCGATTCACTTTGCCGCTTTCTATGACAACGTTTGCATCATTATTGCTCTCTG 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCTGAAAAAAGAGGCTGGATGCCGATTCACTTTGCCGCTTTCTATGACAACGTTTGCATCATTATTGCTCTCTG 2442
Query 1161 TAGGAAGGATCCTAGTTTGCTAGAAGCTGAGGCAACAGCTGAGAATCAGTGCACTCCACTGTTACTTGCTGCCA 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TAGGAAGGATCCTAGTTTGCTAGAAGCTGAGGCAACAGCTGAGAATCAGTGCACTCCACTGTTACTTGCTGCCA 2516
Query 1235 CTTCAGGAGCACTGGACACTATTCAATACCTGTTTTCTATCGGTGCTAACTGGAGAAAAACAGATATTAAAGGA 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CTTCAGGAGCACTGGACACTATTCAATACCTGTTTTCTATCGGTGCTAACTGGAGAAAAACAGATATTAAAGGA 2590
Query 1309 AATAATATAATCCATTTATCAGTGTTAACCTTTCATACAGAGGTTCTCAAATATATAATAAAATTAAATATTCC 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AATAATATAATCCATTTATCAGTGTTAACCTTTCATACAGAGGTTCTCAAATATATAATAAAATTAAATATTCC 2664
Query 1383 TGAACTCCCAGTGTGGAAAACTTTGGTAGAAATGTTACAGTGTGAAAGCTATAAACGAAGGATGATGGCCGTCA 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TGAACTCCCAGTGTGGAAAACTTTGGTAGAAATGTTACAGTGTGAAAGCTATAAACGAAGGATGATGGCCGTCA 2738
Query 1457 TGTCCTTGGAAGTAATTTGCTTAGCAAATGATCAATACTGGAGATGTATTTTGGATGCAGGCACCATTCCTGCC 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TGTCCTTGGAAGTAATTTGCTTAGCAAATGATCAATACTGGAGATGTATTTTGGATGCAGGCACCATTCCTGCC 2812
Query 1531 TTAATCAATCTATTAAAAAGTTCCAAAATAAAACTGCAGTGCAAAACTGTTGGGTTATTGAGTAATATCTCAAC 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TTAATCAATCTATTAAAAAGTTCCAAAATAAAACTGCAGTGCAAAACTGTTGGGTTATTGAGTAATATCTCAAC 2886
Query 1605 CCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCTAATCAACCTACTGGTTTGTGATG 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CCACAAAAGTGCAGTGCATGCTTTGGTAGAAGCGGGAGGCATTCCATCTCTAATCAACCTACTGGTTTGTGATG 2960
Query 1679 AGCCTGAAGTACACTCTCGCTGTGCTGTCATTCTATATGATATTGCTCAATGTGAAAACAAGGATGTTATTGCC 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 AGCCTGAAGTACACTCTCGCTGTGCTGTCATTCTATATGATATTGCTCAATGTGAAAACAAGGATGTTATTGCC 3034
Query 1753 AAATATAATGGAATCCCAAGCCTGATAAATCTATTGAACTTAAACATAGAAAATGTGCTAGTAAATGTAATGAA 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AAATATAATGGAATCCCAAGCCTGATAAATCTATTGAACTTAAACATAGAAAATGTGCTAGTAAATGTAATGAA 3108
Query 1827 CTGTATACGGGTATTGTGTATAGGAAATGAAAACAATCAAAGAGCTGTGAGAGAACATAAAGGCCTCCCATATC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CTGTATACGGGTATTGTGTATAGGAAATGAAAACAATCAAAGAGCTGTGAGAGAACATAAAGGCCTCCCATATC 3182
Query 1901 TTATCAGATTTCTGAGTTCTGATTCAGGTTTATTTAACTTGTTCTTAAATTCATTTGAAGATGTGTTGAAGGCT 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 TTATCAGATTTCTGAGTTCTGATTCAGGTTTATTTAACTTGTTCTTAAATTCATTTGAAGATGTGTTGAAGGCT 3256
Query 1975 GTATCTTCTGCTGCAATTGCTGAGGTTGGGCGTGACAATAAGGAAATTCAGGATGCTATAGCTATGGAGGGAGC 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GTATCTTCTGCTGCAATTGCTGAGGTTGGGCGTGACAATAAGGAAATTCAGGATGCTATAGCTATGGAGGGAGC 3330
Query 2049 GATTCCTCCTCTGGTGGCTCTTTTTAAAGGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATGGCTGTGGAAT 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GATTCCTCCTCTGGTGGCTCTTTTTAAAGGGAAACAAATTAGTGTCCAAATGAAAGGTGCAATGGCTGTGGAAT 3404
Query 2123 CACTGGCAAGTCACAACGCTCTTATACAGAAAGCATTTCTGGAAAAATCGTTAACTAAATATCTTTTAAAACTC 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CACTGGCAAGTCACAACGCTCTTATACAGAAAGCATTTCTGGAAAAATCGTTAACTAAATATCTTTTAAAACTC 3478
Query 2197 CTAAAGGCATTTCAAATAGATGTTAAGGAACAAGGAGCTGTTGCACTTTGGGCCTTGGCAGGACAAACACTAAA 2270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CTAAAGGCATTTCAAATAGATGTTAAGGAACAAGGAGCTGTTGCACTTTGGGCCTTGGCAGGACAAACACTAAA 3552
Query 2271 ACAACAAAAATATATGGCAGAACAAATTGGATACAGCTTTATAATAAATATGCTTTTGTCACCATCAGCTAAAA 2344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 ACAACAAAAATATATGGCAGAACAAATTGGATACAGCTTTATAATAAATATGCTTTTGTCACCATCAGCTAAAA 3626
Query 2345 TGCAGTATGTTGGATATTTGCTTAAGAGCAGGCTATGCATTAACACTTTTTGCCTTCAA--------------- 2403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TGCAGTATGTTGGATATTTGCTTAAGAGCAGGCTATGCATTAACACTTTTTGCCTTCAATAATCGCTTTCAACA 3700
Query 2404 -------------------------------------------------------------------------- 2403
Sbjct 3701 ATACTTAATATTGGAAAGTGGAATAATGACCATATCTATTTTTGAACGTTTTCTTGAATCAACAGTTGAAACTG 3774
Query 2404 -------------------------------------------------------------------------- 2403
Sbjct 3775 AGAAGGCAATGGCAGCATTTCAGATTGTTGTACTGGCTAAAGTCATTAGAGATATGGACCATATTACTTTGTCT 3848
Query 2404 -------------------------------------------------------------------------- 2403
Sbjct 3849 GCAAGAGGTGTTACTATTTTAGTTGATAGTCTGTATTCAGTTCAGACTTCTACTATTGTCTTGACAGGGAATTT 3922
Query 2404 -------------------------------------------------------------------------- 2403
Sbjct 3923 AATAGCAAGCCTGGCTCATTCTAGAGCTGGTATCCCAGAAGCATTTACCACATTAGGAACAATCCAACGGCTCT 3996
Query 2404 ----------------------------- 2403
Sbjct 3997 GCTATCATTTGTACTCGGGAATAGAAGAG 4025
