Nucleotide Global Alignment
Description
- Query:
- TRCN0000477615
- Subject:
- NR_135495.2
- Aligned Length:
- 2826
- Identities:
- 1547
- Gaps:
- 1040
Alignment
Query 1 -------------------------------ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTC 43
|||||.|||..||||||.|.||||.||||.||.||||||||||
Sbjct 1 GCAGAGCGCGGGGTCACCGGGAGGAGACGCCATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTC 74
Query 44 TGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATC 117
||||||||.||||||.|.||||||||||||.|.|||||||.|||||||||||||||||.|||||||||||||||
Sbjct 75 TGGGCCCCAGGACCCGCATGCAGGCAGGGCCCTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATC 148
Query 118 ACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAA 189
|.|..||||||.||.||||||.||.|||||||||||.|||.||||.||||||||||||..|| |||.||||..
Sbjct 149 AGCTGGGGGAGCCCCGTGACCATCTGGTGTCAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGG 222
Query 190 AAGAAAACAGCACCCTGGATTACACGGAT--CCCACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATC 260
||| ..|||..|||||| .|||...|| |||||.|||.|....|||.|| |||||| |||.||||||||||
Sbjct 223 AAG--CCCAGAGCCCTGG--GACAGAAATAACCCACTGGAACCCAAGAACAA-GGCCAGATTCTCCATCCCATC 291
Query 261 CATCACCTGGGAACATGCAGGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTG 334
|||.||...|.|.|||||||||.|.||.|||||..|||||...|| |.||||||||.|.||||||..|||.|
Sbjct 292 CATGACACAGCACCATGCAGGGAGATACCGCTGCCACTATTACAG---CTCTGCAGGCTGGTCAGAGCCCAGCG 362
Query 335 ACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAAC 408
|||||||||||||||||.||||||||..|||||.||||||||||||||||||||.|||||||||.||||||..|
Sbjct 363 ACCCCCTGGAGCTGGTGATGACAGGATTCTACAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCC 436
Query 409 TCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGG--------CATTTGATGGCTTCATTCTG-TGTAA 473
|||||.||||||.|.|||||||..||||.|||||||..|| ||||| || ||||| || ||
Sbjct 437 TCAGGGGGGAATATGACCCTCCGATGTGGCTCACAGAAGGGATATCACCATTT--TG------TTCTGATG-AA 501
Query 474 GGAAGGAGAAGATGAACACCC----ACAATGCCTGAACTC---CCAGCCCCATGCCCGTGGGTCGTCCCGCGCC 540
||||||||||.|..|.|.||| || ||||.|||| .||||.||| |.|||||..||.||..|||
Sbjct 502 GGAAGGAGAACACCAGCTCCCCCGGAC----CCTGGACTCACAGCAGCTCCA---CAGTGGGGGGTTCCAGGCC 568
Query 541 ATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCC 614
.|.|||.|.|||||||||||||.|||.||.|.|||||||
Sbjct 569 CTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGGTGG----------------------------------- 607
Query 615 CTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAG 688
|||.||.||||.||||||.||.||| |.|
Sbjct 608 ---------------------------------------------AGGCGTGTCTAGGAAGCCCTCCCTC-CTG 635
Query 689 ----TGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAA 758
||||| ||.|||.||.|||||||||.|.|||.||||||.||.||||||||||||||||..||||||.|
Sbjct 636 ACCCTGCAG---GGCCCTGTCCTGGCCCCTGGGCAGAGCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGA 706
Query 759 CAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCA-CAGCCCCAGGCTGGGCTC 831
|||||||||||||||||||||.|||||||||||||||||.||||.|.||||| || ||||||||||||||||||
Sbjct 707 CAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTCCTCCAGCGCCCTGGC-CAGCAGCCCCAGGCTGGGCTC 779
Query 832 TCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTACGGTGCACACAA 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 780 TCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGGTGCTATGGTGCACACAA 853
Query 906 CCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACAGTTCTATGACAGAGTCT 979
|||||||||||||||||||||||||||.|||||||||||||||||||||.||||||||.|||||||||..||||
Sbjct 854 CCTCTCCTCCGAGTGGTCGGCCCCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATCTATGACACCGTCT 927
Query 980 CCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGG 1053
||||.||.|..||||||||||||||.||||||||||||||||||.|||||||||||||||||||||.|||.|..
Sbjct 928 CCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTCAGGAGAGAACATGACCCTGCTGTGTCAGTCACGGGGGTAT 1001
Query 1054 ATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCA 1127
.|..|.|||||||||||||||||.||.||||||||..||..||||..||||||.|||||||.||||..|.||||
Sbjct 1002 TTTGACACTTTCCTTCTGACCAAAGAAGGGGCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAGCTCA 1075
Query 1128 AAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCAC 1201
.||.|||||||||||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1076 TAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCAC 1149
Query 1202 AGAGCTCCAAACCCTACCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGC 1275
..||||||||.|||.||||||||.||..|||||||||.||||||||.|||.||||||||||||..|||||.|||
Sbjct 1150 GCAGCTCCAACCCCCACCTGCTGTCTTTCCCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGC 1223
Query 1276 CCCAGCTCCCCGACAACAGGCCCCACCTCCACATCTGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGA 1349
.|||||..|||..|.|||||.||..||||||||.|
Sbjct 1224 TCCAGCCTCCCACCCACAGGGCCGCCCTCCACACC--------------------------------------- 1258
Query 1350 TCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCC 1423
||||||||||||..||||||.||||.||||.||..|||.|||||||.||.||||.||||||.|||
Sbjct 1259 ---------TGGTCTGGGAAGATACCTGGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCC 1323
Query 1424 TCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATC-GACCCAGAGAAAGGC 1496
||||||||.||| |||||.||||||| ||..|||||..||||||||.||||||| || ||||||||||.|
Sbjct 1324 TCCTCCTCTTCC---TCCTCCTCCTCCG---TCAGCGTCACAGCAAACACAGGACATCTGA-CCAGAGAAAGAC 1390
Query 1497 TGATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAG 1570
|||||||||.|.||||||||||||||.||.|.|||||||||..|||||.|||||||.|.|||||||||||||||
Sbjct 1391 TGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACAGAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAG 1464
Query 1571 CTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGAC 1644
||||.||.|.||||||||||||||||||||||||.||||||.||||||||.|||||||..||||||||.|||||
Sbjct 1465 CTGCTGACGTCCAGGAAGAAAACCTCTATGCTGCTGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGAC 1538
Query 1645 ACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGA 1718
|.||.||||||||||||||||||||||||||||||||||||||||..|||||||||||||||.|||||||||||
Sbjct 1539 AGTCAGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGA 1612
Query 1719 AATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGC 1792
|||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1613 AATGGCCTCTCCTCCCTCCTCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGC 1686
Query 1793 AGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTT 1866
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 AGATGGACACTGAGGCTGCTGCATCTGAAGCCTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTT 1760
Query 1867 AGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCT 1940
|||||||||||||||||||||||||||||||||||||||....|||||||||.|||||||||||||||||||||
Sbjct 1761 AGACGGAAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCT 1834
Query 1941 GGCCATCCAC---------------------------------------------------------------- 1950
||||||||||
Sbjct 1835 GGCCATCCACTAGCCCGGGGGGTACGCAGACCCCACACTCAGCAGAAGGAGACTCAGGACTGCTGAAGGCACGG 1908
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 1909 GAGCTGCCCCCAGTGGACACCAGTGAACCCCAGTCAGCCTGGACCCCTAACACAGACCATGAGGAGACGCTGGG 1982
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 1983 AACTTGTGGGACTCACCTGACTCAAAGATGACTAATATCGTCCCATTTTGGAAATAAAGCAACAGACTTCTCAA 2056
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2057 CAATCAATGAGTTAATAACAAAAAAACAAAAAACAAAAACAGACGTAAAGGCCGGGTGTGGTACTCAGGAGGCT 2130
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2131 GAGTGGGGAGGATTCCTTGAACACAAGAAGTTAAGGCTGCTGAGGCTGCAGTGAGCTATGACTGTGCCACTGCA 2204
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2205 CTCCAGCCTGTGTGACAGAGCGAGACCTTGTCTCTAAAAAAAAAAACAGTGAATGTTTTAAACTGAATGATAAT 2278
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2279 GTAAATATTATACATCGAACTTATGACATGGGAAAATTAAGAAGCATAAATAGGCCGGGCGCGGTGGCTCACGC 2352
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2353 CTATAATCTCAGCACTTTGGGAGGCTGATGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAAC 2426
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2427 ACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCGAGTGCCTATAGTCCCAGC 2500
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2501 TACTCAGGAGGCTGAGGCAGGAGAATGGCATGAGCCCGGGAGGCAGAGCTTGCAGTGAGCTGAGATCGCACCAC 2574
Query 1951 -------------------------------------------------------------------------- 1950
Sbjct 2575 TGCACTCCAGCCTGGGCGACAGAGTGAGATTCCGTCTCGAAAAAAAAAAAAAAAGAAAGAAAAAAAATAAAAAA 2648
Query 1951 -------------- 1950
Sbjct 2649 GAAGCATAACCAGG 2662
