Nucleotide Global Alignment
Description
- Query:
- TRCN0000477616
- Subject:
- NM_146219.1
- Aligned Length:
- 1856
- Identities:
- 1425
- Gaps:
- 214
Alignment
Query 1 ATGATGGAGGGAAGCAGGCAGACGCGAGTGTCTCGGCCATACAAGATCAGCGAATCATCAAAGGTATACCGCTG 74
|||||||.|||||.|||||.|||.||.||.|||||||||||.|||||.||.||.||||||||.||||.|||
Sbjct 1 ---ATGGAGGCAAGCAAGCAGATGCGGGTATCCCGGCCATACAAAATCAGTGAGTCTTCAAAGGTGTACCACTG 71
Query 75 GGCCGACCACTCAAGCACGGTGCTGCAGCGGCTGAACGAGCAGCGTCTCCGCGGGCTCTTCTGCGACGTCGTCC 148
|.|.||||||||.|...||||||||||||||||||||||||||||.||.|.|||.||||||||||||||.||.|
Sbjct 72 GCCTGACCACTCTACTGCGGTGCTGCAGCGGCTGAACGAGCAGCGGCTGCACGGCCTCTTCTGCGACGTGGTGC 145
Query 149 TGGTGGCCGATGAGCAGCGTGTGCCAGCCCATCGCAACCTGCTGGCCGTGTGCAGCGACTACTTCAACTCCATG 222
||||||.|||.|||||||..|||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 146 TGGTGGTCGAAGAGCAGCAAGTGCCAGCCCACCGCAACCTTCTGGCTGTGTGCAGCGACTACTTCAACTCCATG 219
Query 223 TTCACCATCGGCATGCGGGAAGCTTTCCAGAAGGAGGTGGAGCTGATCGGCGCCTCCTACATTGGGCTCAAGGC 296
|||||..|.||||||||.|||||||||||||||||||||||||||.|.|||.||||||||.|.|||||||||||
Sbjct 220 TTCACACTGGGCATGCGCGAAGCTTTCCAGAAGGAGGTGGAGCTGGTGGGCACCTCCTACGTGGGGCTCAAGGC 293
Query 297 CGTGGTGGACTTCCTGTACGGCGGGGAGCTGGTGCTGGATGGCGGCAACATTGACTACGTCCTGGAGACGGCTC 370
||||||.||.|||||.|||.||.|.|||||||.||||||.|||.||||||||||||||.|||||||||||||.|
Sbjct 294 CGTGGTAGATTTCCTCTACAGCAGCGAGCTGGAGCTGGACGGCAGCAACATTGACTACATCCTGGAGACGGCGC 367
Query 371 ACCTGCTGCAGATCTGGACGGTGGTAGACTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAGGACAACTAC 444
|.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 368 ATCTGCTGCAGATCTGGACCGTGGTGGATTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAGGACAACTAT 441
Query 445 CTGTACCTGCAGGAGCTGGCCTCCATCTACAGCCTCAAGCGGCTTGATGCCTTCATCGATGGCTTCATCCTGAA 518
||.|||||.|||||||||||||||||||||||.||||||.||||.|||||||||||||||.|||||.|.||||.
Sbjct 442 CTCTACCTACAGGAGCTGGCCTCCATCTACAGTCTCAAGAGGCTCGATGCCTTCATCGATAGCTTCGTACTGAG 515
Query 519 CCACTTCGGCACGCTGTCCTTTACGCCCGACTTCCTGCAGAACGTCTCCATGCAGAAGCTGTGTGTCTACCTGA 592
|||||||.|||||||||||||.|||||.||||||||||||..|.|||||.||||||||||||||||||||||||
Sbjct 516 CCACTTCAGCACGCTGTCCTTCACGCCTGACTTCCTGCAGTCCATCTCCGTGCAGAAGCTGTGTGTCTACCTGA 589
Query 593 GCAGCAGCGAGGTGCAGCGGGAGTGTGAGCACGACCTCTTGCAGGCCGCCCTGCAGTGGCTGACGCAGCAGCCC 666
||||..||.||||.||||...|.||.||..|||||||..||||||..||.|||||||||||.|||||||||||.
Sbjct 590 GCAGTGGCCAGGTACAGCACAAATGGGAATACGACCTGCTGCAGGTGGCTCTGCAGTGGCTCACGCAGCAGCCG 663
Query 667 GAGCGCGAGGCCCACGCCCGCCAGGTGCTGGAGAACATCCACTTCCCGCTCATCCCCAAGAACGACCTGCTGCA 740
||||||||||..|||.||||||..||.|||||||||||||.||||||.|||.|||||.||.||..||||||.||
Sbjct 664 GAGCGCGAGGTGCACACCCGCCGCGTTCTGGAGAACATCCGCTTCCCCCTCTTCCCCGAGGACATCCTGCTACA 737
Query 741 CCGCGTCAAGCCGGCCGTGTGCTCGCTGCTGCCCAAGGAGGCCAACTGCGAGGGCTTCATCGAGGAGGCCGTGC 814
.||.||.||||.||||.|||||||.||||||||||..|||||||||.||||||||||..|.|||||||||.|||
Sbjct 738 GCGGGTGAAGCTGGCCATGTGCTCTCTGCTGCCCAGCGAGGCCAACGGCGAGGGCTTTGTGGAGGAGGCCATGC 811
Query 815 GCTACCACAACAACCTGGCGGCCCAGCCCGTCATGCAGACCAAGCGCACGGCGCTGCGCACCAACCAGGAGCGC 888
.|||||||||||.|||||.|||||||||.|||.|||||||.|||||.|||..|||||||.| |.|||||.||
Sbjct 812 ACTACCACAACAGCCTGGTGGCCCAGCCTGTCCTGCAGACGAAGCGAACGCTGCTGCGCTC---CGAGGAGTGC 882
Query 889 CTGCTGTTTGTGGGCGGCGAGGTCTCCGAGCGGTGTCTGGAGCTCAGTGACGACACCTGCTACCTGGACGCCAA 962
.||||.||.|||||.|||||||||||.|||||||||||||||||.||.||.||||||||||||||.|||.||||
Sbjct 883 TTGCTCTTCGTGGGGGGCGAGGTCTCTGAGCGGTGTCTGGAGCTGAGCGATGACACCTGCTACCTAGACACCAA 956
Query 963 GAGCGAGCAGTGGGTCAAAGAGACGCCGCTGCCCGCCCGGCGGAGCCACCACTGTGTCGCGGTGCTGGGGGGCT 1036
||..|||||||||||.||.|||||..|.|||||.|||||.||||||||||||||.|||||.|||||||||||||
Sbjct 957 GAATGAGCAGTGGGTGAAGGAGACATCCCTGCCGGCCCGCCGGAGCCACCACTGCGTCGCTGTGCTGGGGGGCT 1030
Query 1037 TCATCTTCATCGCCGGCGGCAGCTTCTCACGGGACAACGGAGGGGATGCGGCCTCCAATCTTCTTTAT------ 1104
||||||||||.|||||.|||||||||||..|.||||||||||||.||||.||||||||.|||||||||
Sbjct 1031 TCATCTTCATTGCCGGGGGCAGCTTCTCGAGAGACAACGGAGGGAATGCCGCCTCCAACCTTCTTTATAGGTAT 1104
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1105 GACCCCCGCCGTAAACAGTGGATCAAGGTGGCGTCCATGAACCAGCGCCGTGTGGATTTCTACCTAGCTTCCAT 1178
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1179 TGAAGACATGCTGGTGGCTGTCGGTGGCCGGAACGAGAATGGAGCGCTGTCTTCTGTAGAGACCTACAGCCCCA 1252
Query 1105 -----------------------------------AGGTTCACGTACGGCCACGCGGGCACCATCTACAAAGAC 1143
||||||||.||.|||||||||||||||||||||||||||
Sbjct 1253 AGACCAACTCCTGGACCTACGTGGCCGGCTTGCCAAGGTTCACCTATGGCCACGCGGGCACCATCTACAAAGAC 1326
Query 1144 TTCGTGTACATCTCGGGGGGCCACGACTACCAAATTGGCCCCTACCGCAAGAACCTGCTATGCTACGACCACCG 1217
||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.||.||.||||||||
Sbjct 1327 TTTGTCTACATCTCAGGGGGCCACGACTACCAGATTGGCCCGTACCGCAAGAACCTGCTGTGTTATGACCACCG 1400
Query 1218 GACAGACGTGTGGGAGGAGCGGCGGCCCATGACCACGGCGCGCGGCTGGCACAGCATGTGCAGCCTGGGTGACA 1291
|||||||||||||||||||.|||||||||||||.||.||.||.||||||||||||||||||||||||||.||||
Sbjct 1401 GACAGACGTGTGGGAGGAGAGGCGGCCCATGACAACAGCTCGGGGCTGGCACAGCATGTGCAGCCTGGGCGACA 1474
Query 1292 GCATCTACTCCATCGGGGGCAGCGATGACAACATCGAGTCCATGGAGCGCTTCGACGTGCTGGGCGTGGAGGCC 1365
||||||||||||||||||||||.||.|||.||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1475 GCATCTACTCCATCGGGGGCAGTGACGACCACATGGAGTCCATGGAGCGCTTCGATGTGCTGGGCGTGGAGGCC 1548
Query 1366 TACAGCCCGCAGTGCAACCAGTGGACCCGCGTGGCGCCGCTGCTGCACGCCAACAGCGAGTCGGGCGTGGCAGT 1439
||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.||
Sbjct 1549 TACAGCCCACAGTGCAACCAGTGGACTCGCGTGGCGCCGCTGCTGCAGGCCAACAGCGAGTCAGGCGTGGCCGT 1622
Query 1440 GTGGGAGGGCCGCATCTACATCCTGGGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGTGCAGGTGT 1513
||||.||||||||||||||||||||||.||.|||||||||||||.|||.||||||||||.|.|.||||||||||
Sbjct 1623 GTGGCAGGGCCGCATCTACATCCTGGGGGGGTACAGCTGGGAGAGCACAGCCTTCTCCAGGGCTGTGCAGGTGT 1696
Query 1514 ACGACCGCGAGGCCGACAAGTGGAGCAGGGGCGTC--GACCTGCCCAAGGCCATCGCTGGCGGGTCCGCCTGTG 1585
|.||..||||||||.|||.|||||||.||| ||| |||||.|||||.|||||.||.||.|.|||.|||||||
Sbjct 1697 ATGATAGCGAGGCCAACAGGTGGAGCCGGG--GTCCTGACCTCCCCAACGCCATTGCGGGTGTGTCGGCCTGTG 1768
Query 1586 TCTGCGCCCTGGAGCCACGGCCAGAGGACAAGAAGAAGA-----AAGG-CAAAGGCAAGAGGCACCAGGACCGG 1653
|.||.|||||..|.|||.|||..|||||.|||||||||| |||| ||||.| |||||||||.
Sbjct 1769 TGTGTGCCCTCAACCCAAGGCTGGAGGAAAAGAAGAAGAGGAACAAGGACAAATG---------CCAGGACCGA 1833
Query 1654 GGCCAG 1659
||.|||
Sbjct 1834 GGTCAG 1839