Nucleotide Global Alignment

Description

Query:
TRCN0000477630
Subject:
XM_017023022.1
Aligned Length:
1894
Identities:
728
Gaps:
1097

Alignment

Query    1  ATGCCGCCCCATGTGGTGCTCACCTTCCGGCGCCTGGGCTGCGCCTTGGCCTCCTGCCGGCTGGCGCCTGCGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACACAGAGGAAGTGGTCTTCTGCACACAGCCCCAGTGGCCCGCTCGGACAGGAGCGCCCCGGTGTTCACCCGTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCTGGCCTTTGGGGACAGAATCGCCCTGGTTGACCAGCACGGCCGCCACACGTACAGGGAGCTTTATTCCCGC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCTTCGCCTGTCCCAGGAGATCTGCAGGCTCTGCGGGTGTGTCGGCGGGGACCTCCGGGAGGAGAGGGTCTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTTCCTATGTGCTAACGACGCCTCCTACGTCGTGGCCCAGTGGGCCTCATGGATGAGCGGCGGTGTGGCAGTAC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCCTCTACAGGAAGCATCCCGCGGCCCAGCTGGAGTATGTCATCTGCGACTCCCAGAGCTCTGTGGTCCTTGTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGCCAGGAGTACCTGGAGCTCCTGAGCCCGGTGGTCAGGAAGCTGGGGGTCCCGCTGCTGCCGCTCACACCAGC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  CATCTACACTGGAGCAGTAGAGGAACCGGCAGAGGTCCCGGTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGATCATCTACACCAGTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCACGCACCAAAACATCAGGGCTGTG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GTGACCGGGCTGGTCCACAAGTGGGCATGGACCAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CCATGGTGTGGTCAACGCGCTGCTCTGTCCTCTCTGGGTGGGAGCCACCTGTGTGATGATGCCTGA--GTTCAG  812
                                                                      |||.||.|  .||.||
Sbjct    1  ----------------------------------------------------------ATGTCTAACTTTTTAG  16

Query  813  CCCTCAGCAGGTTTG-GGAAAAG------TTCTTAAGTTCTGAAACGCCGC---GGATCAATGTCTTTATGGCA  876
            |.||      |||.| .||||||      ||||..|  || |||..||| |   |||||..|||     ||..|
Sbjct   17  CACT------GTTCGTTGAAAAGACTCCCTTCTCCA--TC-GAACAGCC-CTTTGGATCTTTGT-----TGAAA  75

Query  877  GTGCCTACAATATACACCAAGCTGATGGAGTACTACGAC----AGGCATTTTACCCAGCCGCACGCCCAGGATT  946
            ||.|.|..|.|         .|||| ||.||    ||.|    .|||  |.|.|.|.|.|.|         |||
Sbjct   76  GTCCGTCGACT---------CCTGA-GGGGT----CGGCTCCTGGGC--TCTGCTCTGTCCC---------ATT  124

Query  947  TCTT---GCGTGCAGTTTGTGAAGAAAAAATTAGGCTGATGGTCTCAGGCTCAGCTGCCCTGCCCCTCCCAGTG  1017
            .|||   |.||||..|||                             ||||||  |.||.||||        ||
Sbjct  125  GCTTTCCGTGTGCCCTTT-----------------------------GGCTCA--TTCCATGCC--------TG  159

Query 1018  CTGGAGAAGTGGAAGAACATCACGGGCCACACCCTGCTGGAGCGGTATGGCATGACCGAGATCGG----CATGG  1087
            ||       |||      .||..|||    ||.||     || |||| .||.||   ||.||.||    || ||
Sbjct  160  CT-------TGG------TTCCTGGG----ACTCT-----AG-GGTA-AGCGTG---GACATGGGGGTTCA-GG  205

Query 1088  CTCTGTCCGGGCCC--CTGACCACTGCCATGC-----------------GCCTGCCAGGTTCCGTGGGGACCCC  1142
            |.|.|.|.|||.||  |||    .|||||.||                 ||||||.||||||||||||||||||
Sbjct  206  CCCAGGCAGGGACCAGCTG----GTGCCAGGCAGCGATACGGTGCTGGGGCCTGCAAGGTTCCGTGGGGACCCC  275

Query 1143  ACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCACGCAG  1216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  276  ACTGCCTGGAGTACAGGTGCGCATTGTCTCAGAAAACCCACAGAGGGAAGCCTGCTCCTACACCATCCACGCAG  349

Query 1217  AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGGGACCC  1290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  350  AGGGAGACGAGAGGGGGACCAAGGTGACCCCAGGGTTTGAAGAAAAGGAGGGGGAGCTGCTGGTGAGGGGACCC  423

Query 1291  TCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGAC  1364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  424  TCCGTGTTTCGAGAATACTGGAATAAACCAGAAGAAACTAAGAGTGCATTCACCCTGGATGGCTGGTTTAAGAC  497

Query 1365  AGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTG  1438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  498  AGGGGACACCGTGGTGTTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTG  571

Query 1439  GAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTG  1512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  572  GAGGCTACAAGGTCAGCGCCCTGGAGGTGGAGTGGCACCTGCTGGCCCACCCCAGCATCACAGATGTGGCTGTG  645

Query 1513  ATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTC  1586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  646  ATTGGAGTTCCGGATATGACATGGGGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTC  719

Query 1587  CCACAGGGAGCTCAAAGAGTGGGCCAG------------------------------------------AAATG  1618
            |||||||||||||||||||||||||||                                          ||||.
Sbjct  720  CCACAGGGAGCTCAAAGAGTGGGCCAGGTTGAAAGAACACCCAACCAAGAGGAGAGAAAACAGCATTCTAAATA  793

Query 1619  T---------------CCTGGCCCC--GTACGCGGTGCCCT-------------------CGGAGCTGG-TGCT  1655
            |               |||.|||.|  |.|.|||| ||.||                   |||||  || ||||
Sbjct  794  TCGGAAGGAAACGAAACCTCGCCTCAGGCATGCGG-GCTCTGACGGGCAGGATGGCGGCACGGAG--GGCTGCT  864

Query 1656  G------GTGGAG---------GAGATCCCGCGGAACCAGAT------------GGGCA-AGATTGACAAGA--  1699
            |      |||.||         .||||      |||.|||||            .|.|| |.||||.|||||  
Sbjct  865  GTATCCAGTGAAGTCAGCAGTTCAGAT------GAAACAGATAACTCCCTTAAAAGACACAAATTGCCAAGACT  932

Query 1700  -AGGC--------------GCTCATCAGGCACTTCCACCCCTCA  1728
             |.||              .||.|.|||    |||         
Sbjct  933  GACGCAAACACTGAAACAGACTGAACAG----TTC---------  963

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