Nucleotide Global Alignment
Description
- Query:
- TRCN0000477691
- Subject:
- NM_001164550.2
- Aligned Length:
- 2543
- Identities:
- 1209
- Gaps:
- 1303
Alignment
Query 1 ATGCCAGGCGGGGGTCCTCAGGGCGCCCCAGCCGCCGCCGGCGGCGGCGGCGTGAGCCACCGCGCAGGCAGCCG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCAGGCGGGGGTCCTCAGGGCGCCCCAGCCGCCGCCGGCGGCGGCGGCGTGAGCCACCGCGCAGGCAGCCG 74
Query 75 GGATTGCTTACCACCTGCAGCGTGCTTTCGGAGGCGGCGGCTGGCACGGAGGCCGGGCTACATGAGAAGCTCGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGATTGCTTACCACCTGCAGCGTGCTTTCGGAGGCGGCGGCTGGCACGGAGGCCGGGCTACATGAGAAGCTCGA 148
Query 149 CAGGGCCTGGGATCGGGTTCCTTTCCCCAGCAGTGGGCACACTGTTCCGGTTCCCAGGAGGGGTGTCTGGCGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAGGGCCTGGGATCGGGTTCCTTTCCCCAGCAGTGGGCACACTGTTCCGGTTCCCAGGAGGGGTGTCTGGCGAG 222
Query 223 GAGTCCCACCACTCGGAGTCCAGGGCCAGACAGTGTGGCCTTGACTCGAGAGGCCTCTTGGTCCGGAGCCCTGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGTCCCACCACTCGGAGTCCAGGGCCAGACAGTGTGGCCTTGACTCGAGAGGCCTCTTGGTCCGGAGCCCTGT 296
Query 297 TTCCAAGAGTGCAGCAGCCCCTACTGTGACCTCTGTGAGAGGAACCTCGGCGCACTTTGGGATTCAGCTCAGAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TTCCAAGAGTGCAGCAGCCCCTACTGTGACCTCTGTGAGAGGAACCTCGGCGCACTTTGGGATTCAGCTCAGAG 370
Query 371 GTGGCACCAGATTGCCTGACAGGCTTAGCTGGCCGTGTGGCCCTGGGAGTGCTGGGTGGCAGCAAGAGTTTGCA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTGGCACCAGATTGCCTGACAGGCTTAGCTGGCCGTGTGGCCCTGGGAGTGCTGGGTGGCAGCAAGAGTTTGCA 444
Query 445 GCCATGGATAGTTCTGAGACCCTGGACGCCAGCTGGGAGGCAGCCTGCAGCGATGGAGCAAGGCGTGTCCGGGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCATGGATAGTTCTGAGACCCTGGACGCCAGCTGGGAGGCAGCCTGCAGCGATGGAGCAAGGCGTGTCCGGGC 518
Query 519 AGCAGGCTCTCTGCCATCAGCAGAGTTGAGTAGCAACAGCTGCAGCCCTGGCTGTGGCCCTGAGGTCCCCCCAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGCAGGCTCTCTGCCATCAGCAGAGTTGAGTAGCAACAGCTGCAGCCCTGGCTGTGGCCCTGAGGTCCCCCCAA 592
Query 593 CCCCTCCTGGCTCTCACAGTGCCTTTACCTCAAGCTTTAGCTTTATTCGGCTCTCGCTTGGCTCTGCCGGGGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCCCTCCTGGCTCTCACAGTGCCTTTACCTCAAGCTTTAGCTTTATTCGGCTCTCGCTTGGCTCTGCCGGGGAA 666
Query 667 CGTGGAGAAGCAGAAGGCTGCCCACCATCCAGAGAGGCTGAGTCCCATTGCCAGAGCCCCCAGGAGATGGGAGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGTGGAGAAGCAGAAGGCTGCCCACCATCCAGAGAGGCTGAGTCCCATTGCCAGAGCCCCCAGGAGATGGGAGC 740
Query 741 CAAAGCTGCCAGCTTGGACGGGCCTCACGAGGACCCGCGATGTCTCTCTCAGCCCTTCAGTCTCTTGGCTACAC 814
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 741 CAAAGCTGCCAGCTTGGACGGGCCTCACGAGGACCCGCGATGTCTCTCTCGGCCCTTCAGTCTCTTGGCTACAC 814
Query 815 GGGTCTCTGCAGACTTGGCCCAGGCCGCAAGGAACAGCTCCAGGCCAGAGCGTGACATGCATTCTTTACCAGAC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGGTCTCTGCAGACTTGGCCCAGGCCGCAAGGAACAGCTCCAGGCCAGAGCGTGACATGCATTCTTTACCAGAC 888
Query 889 ATGGACCCTGGCTCCTCCAGTTCTCTGGATCCCTCACTGGCTGGCTGTGGTGGTGATGGGAGCAGCGGCTCAGG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATGGACCCTGGCTCCTCCAGTTCTCTGGATCCCTCACTGGCTGGCTGTGGTGGTGATGGGAGCAGCGGCTCAGG 962
Query 963 GGATGCCCACTCTTGGGACACCCTGCTCAGGAAATGGGAGCCAGTGCTGCGGGACTGCCTGCTGAGAAACCGGA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGATGCCCACTCTTGGGACACCCTGCTCAGGAAATGGGAGCCAGTGCTGCGGGACTGCCTGCTGAGAAACCGGA 1036
Query 1037 GGCAGATGGAGGTAATATCCTTAAGATTAAAACTTCAGAAACTTCAGGAAGATGCAGTTGAGAATGATGATTAT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCAGATGGAGGTAATATCCTTAAGATTAAAACTTCAGAAACTTCAGGAAGATGCAGTTGAGAATGATGATTAT 1110
Query 1111 GATAAAGCTGAGACGTTACAACAAAGATTA----------------GAAGACC-----TGGA------------ 1151
||||||| ||.||.||...||.|.||| |||.|.| ||||
Sbjct 1111 GATAAAG----GAAGTCACTGGAAGGGTTACATTTTCATTTGGGGTGAACAGCAACTGTGGATACGGATCATGA 1180
Query 1152 ------ACAAGAGAAAATCAGCCTGCACTTTC---AACTTCCTTCAAGGCAGCCAGCTCTTAGCAGTTTCCTGG 1216
||||..||||||..||.||| |.||| ||||| ||| ||||||.| |||||.|.
Sbjct 1181 AAATTGACAATGGAAAATGGGCATGC-CATTCTGGAACTT--TTC-------CCAGCTTT------TTTCCAGA 1238
Query 1217 GTCACCTGGCAGCACAAGTCCAGGCTGCCTTG----CGCCGTGG-GGCCACTCAGCAGGCCAGCGGAGATGACA 1285
|.||.||||.|.|| ..|||.||| |.||.||| .|||.| ||||
Sbjct 1239 GCCAGCTGGAACCA---------ATTGCTTTGGATCCACCATGGAAGCCTC-------------------GACA 1284
Query 1286 CCCACACCCCACTGAGAATGGAGCCGAGGCTGTTGGAACCCACTGCTCAGGACAGCTTGCACGTGTCCATCACG 1359
.||
Sbjct 1285 TCC----------------------------------------------------------------------- 1287
Query 1360 AGACGAGACTGGCTTCTTCAGGAAAAGCAGCAGCTACAGAAAGAAATCGAAGCTCTCCAAGCAAGGATGTTTGT 1433
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1434 GCTGGAAGCCAAAGATCAACAGCTGAGAAGGGAAATAGAGGAGCAAGAGCAGCAACTCCAGTGGCAGGGCTGCG 1507
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1508 ACCTGACCCCACTGGTGGGCCAGCTGTCCCTGGGTCAGCTGCAGGAGGTCAGCAAGGCCTTGCAGGACACCCTG 1581
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1582 GCCTCAGCCGGTCAGATTCCCTTCCATGCAGAGCCACCGGAAACCATAAGGAGCCTCCAGGAAAGAATAAAATC 1655
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1656 CCTCAACTTGTCACTTAAAGAAATCACTACTAAGGTGTGTATGAGTGAGAAATTCTGCAGCACCCTGAGGAAGA 1729
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1730 AAGTTAACGATATTGAAACCCAACTACCAGCCTTGCTTGAAGCCAAAATGCATGCCATATCAGGAAACCATTTC 1803
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1804 TGGACGGCTAAAGACCTCACCGAGGAGATTAGATCATTAACATCAGAGAGAGAAGGGCTGGAGGGACTCCTCAG 1877
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1878 CAAGCTGTTGGTGTTGAGTTCCAGGAATGTCAAAAAGCTGGGAAGTGTTAAAGAAGATTACAACAGACTGAGAA 1951
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 1952 GAGAAGTGGAGCACCAGGAGACTGCCTATGAAACAAGTGTGAAGGAAAATACTATGAAGTACATGGAAACACTT 2025
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2026 AAGAATAAACTGTGCAGCTGCAAGTGTCCACTGCTTGGGAAAGTGTGGGAAGCTGACTTGGAAGCTTGTCGATT 2099
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2100 GCTTATCCAGAGCCTACAGCTCCAGGAAGCCAGGGGAAGCCTGTCTGTAGAAGATGAGAGGCAGATGGATGACT 2173
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2174 TAGAGGGAGCTGCTCCTCCTATTCCCCCCAGGCTCCACTCCGAGGATAAAAGGAAGACCCCTTTGAAGGAATCT 2247
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2248 TACATCCTTTCTGCAGAACTTGGAGAAAAGTGTGAAGACATAGGCAAGAAGCTATTGTACTTGGAAGATCAACT 2321
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2322 TCACACAGCAATCCACAGTCATGATGAAGATCTCATTCAGTCTCTCAGGAGGGAGCTCCAGATGGTGAAGGAAA 2395
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2396 CTCTGCAGGCCATGATCCTGCAGCTCCAGCCAGCAAAGGAGGCGGGAGAAAGAGAAGCTGCAGCTTCCTGCATG 2469
Sbjct 1288 -------------------------------------------------------------------------- 1287
Query 2470 ACAGCTGGTGTCCACGAAGCACAAGCC 2496
Sbjct 1288 --------------------------- 1287
