Nucleotide Global Alignment
Description
- Query:
- TRCN0000477724
- Subject:
- XM_005255492.4
- Aligned Length:
- 1500
- Identities:
- 502
- Gaps:
- 939
Alignment
Query 1 ATGATGAGCCGCTGTCTCATTCTGCAAATGGTGAAGCTCTCTATTGTCCTGACCCCACA-GTTCCTGTCGCATG 73
| ||| .|||.||.|
Sbjct 1 ----------------------------------------------------------ATGTT-TTGTTGCTT- 14
Query 74 ACCAGAGCCAGCTCACCAAGGA--------GCTGCAGC--AGCATGTAAAGTCAGTGACATGCCCATGCGAGTA 137
|||| |||| ||| ||..|||||| |
Sbjct 15 ------------------AGGATATGAATGGCTG-AGCGGAGGCTGTAAA-----------------------A 46
Query 138 CCTGAGGAA---------GGTTATCAATAGTCTGGCTGTCTATCGTCATCGTGAGACTGACTTTGGTGTAGGAG 202
||| ||.| |||||||||||.||||||||.|.||||||||||||.|||||||||||||| |.||
Sbjct 47 CCT--GGCACTCTGCTTGGGTTATCAATACTCTGGCTGACCATCGTCATCGTGGGACTGACTTTGGTG--GAAG 116
Query 203 TTCGAGACCACCCTGGCCAACATGGCAAAACCCCATCTCCACAAAAATTGGATAATTTGATAATTATCATTATT 276
|.| ||.|.||.|||||||||.|
Sbjct 117 TCC----------------------------------------------------TTGGTTACTTATCATTACT 138
Query 277 GGGTTTCTGAGACGTTACACATTTAACATTCT-CTTCTGCACAAGTTGCCTTTGTGTGTCTTTCCTGAAGACTA 349
|.||||||||||.||||.|.||||..|| ||| |.||||||||||||.||||||||||||||||||||||||||
Sbjct 139 GTGTTTCTGAGAAGTTATAAATTTGCCA-TCTCCCTCTGCACAAGTTACCTTTGTGTGTCTTTCCTGAAGACTA 211
Query 350 TCTTCTGGTCTCGAAATGGACATGATGGATCCATGGATGTACAGCAGAGAGCCTGGAGGTCCAACCACAGTAGA 423
|||||..|||||.||||||||||||||||||||.|||||||||||||||||||.||||||||||||.|.|||||
Sbjct 212 TCTTCCCGTCTCAAAATGGACATGATGGATCCACGGATGTACAGCAGAGAGCCAGGAGGTCCAACCGCCGTAGA 285
Query 424 CAGAAAGGGCTGAGGTCCATTTGTATGCACACAAAGAAAAGAGTTTCTTCCTTTCGAGGAAATAAAATTGGCCT 497
|||.| |||||.||||||||.|||
Sbjct 286 CAGGA---------------------------------------------------AGGAATTAAAATTGTCCT 308
Query 498 GAAAGACGTCATTACTCTACGGAGGCATGTGGAAACAAAAGTTAGAGCTAAAATCCGTAAGAGGAAGGTGACAA 571
|.|||||.||.|||||.||.||||.||.||||||||.||||||.|||||||||||.||||||.|||||||||||
Sbjct 309 GGAAGACATCTTTACTTTATGGAGACAGGTGGAAACCAAAGTTCGAGCTAAAATCTGTAAGATGAAGGTGACAA 382
Query 572 CGAAAATCAACCGTCATGACAAAATCAATGGAAAGAGGAAGACCGCC--------------------------- 618
|.|||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CAAAAGTCAACCGTCATGACAAAATCAATGGAAAGAGGAAGACCGCCAAAGAACATCTGAGGAAACTAAGCATG 456
Query 619 -----------------AGAAAA--------------CAGA--------------------------------- 628
|||||| ||||
Sbjct 457 AAAGAACGTGAGCACGGAGAAAAGGAGAGGCAGGTGTCAGAGGCAGAGGAAAACGGGAAATTGGATATGAAAGA 530
Query 629 -----------------AAATGTTTCAACGTGCGCAAGAGTTGCGGCGGCGGGCAGAGGACTACCACAAATGCA 685
|||||||||||||||||||||.|||||||||||||||||||||||||.|||.|||||
Sbjct 531 AATACACACCTACATGGAAATGTTTCAACGTGCGCAAGCGTTGCGGCGGCGGGCAGAGGACTACTACAGATGCA 604
Query 686 AAATCCCCCCTTCTGCAAGAAAGCCTCTTTGCAACTGGGTCAGAATGGTGGCAGCGGAGCATCGTCATTCTT-C 758
|||||.||||||||||||||||||||||||||||| |||.||| ||| |
Sbjct 605 AAATCACCCCTTCTGCAAGAAAGCCTCTTTGCAAC-------------------CGGTGCA--------CTTAC 651
Query 759 AGGATTGCCCTACTGGCTCTACCTCACAGCTGAAACTTTAAAAA----ACAGGATGGGCCGCCA-GCCACCTCC 827
| ||| |||...|||||...|| ||||| |.||| ||| |||| |||
Sbjct 652 A--ATT-------TGGTATTACCTGGGAG-TGAAA----AGAAATATTACA---------GCCATGCC------ 696
Query 828 TCCAACTCAACAACATTCTATAACTGATAACTCCCTGAGCCTCAAGACACCTCCTGAGTGTCTGCTCACTCCCC 901
Sbjct 697 -------------------------------------------------------------------------- 696
Query 902 TTCCACCCTCAGTGGATGATAATATCAAGGAGTGTCCTCTTGCTCCTCTTCCACCCTCTCCTCTTCCACCCTCA 975
Sbjct 697 -------------------------------------------------------------------------- 696
Query 976 GTGGATGATAATCTGAAGGAATGTCTCTTTGTCCCGCTTCCACCCTCTCCTCTTCCACCCTCAGTGGATGATAA 1049
Sbjct 697 -------------------------------------------------------------------------- 696
Query 1050 TCTGAAGGAATGTCTCTTTGTCCCGCTTCCACCCTCTCCTCTTCCACCCTCAGTGGATGATAATCTCAAGACTC 1123
Sbjct 697 -------------------------------------------------------------------------- 696
Query 1124 CTCCCTTAGCTACTCAGGAGGCCGAGGTGGAAAAACCACCCAAACCCAAGAGGTGGAGGGTGGATGAGGTGGAA 1197
Sbjct 697 -------------------------------------------------------------------------- 696
Query 1198 CAATCACCGAAACCCAAGAGGCGGAGGGTGGATGAGGTGGAACAATCGCCCAAGCCCAAGAGGCAGAGGGAGGC 1271
Sbjct 697 -------------------------------------------------------------------------- 696
Query 1272 CGAGGCACAACAATTACCCAAACCCAAGAGGCGGAGGTTGAGTAAGCTGAGAACACGCCATTGCACTCAAGCCT 1345
Sbjct 697 -------------------------------------------------------------------------- 696
Query 1346 GGGCAATAAGAATAAATCCG 1365
Sbjct 697 -------------------- 696
