Nucleotide Global Alignment

Description

• Query: TRCN0000477744
• Subject: XM_017026989.1
• Aligned Length: 1539
• Identities: 1073
• Gaps: 402

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGATGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCGTCCCCAAC  74
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  ---AGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  219
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  220  ACCTCAGAGCTGGACGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  293
            |.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  294  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCACCAGGTCCTGCACG  367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  368  AGTGCAACTCACCGTACATCGTGGGCTTCTACGGGGCCTTCTACTGTGACAGGGAGATCAGCATCTGCATGGAG  441
            |.||||||||.|||||||||||||||||||||||||||||||||.|||||.|||||||||||||.||||||||.
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  442  CACATGGATGGCGGCTCCCTGGACCAGGGGCTGAAAGAGGCCAAGAGGATTCCCGAGGACATCCTGGGGAAAGT  515
            ||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  516  CAGCATTGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAAATGTGAAGCCCT  589
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  590  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  664  ATGGCCAACTCCTTCATGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACATTACTCGGTGCA  737
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACATTACTCGGTGCA  740

Query  738  GTCGGTCATCTGGAGCATGGACCTGTCCCTGGTGGAGCTGGCCATCGAAAGGTACCCCATCCCCCCGCCCGACG  811
            |||||.||||||||||||||.||||||||||||||||||||||.|||.||||||||||||||||||||||||||
Sbjct  741  GTCGGACATCTGGAGCATGGGCCTGTCCCTGGTGGAGCTGGCCGTCGGAAGGTACCCCATCCCCCCGCCCGACG  814

Query  812  CCAAGGAGCTGGAGGCCATCTTTGGCCAGCCCGTGGTCGACAGGGAAGAAGGAGAGCCTCACAGCATCTCCTCT  885
            ||||.||||||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||..||
Sbjct  815  CCAAAGAGCTGGAGGCCATCTTTGGCCGGCCCGTGGTCGACGGGGAAGAAGGAGAGCCTCACAGCATCTCGCCT  888

Query  886  TGGCCAGGGTCCCCCGGGCGCCCCAACAGCGGTTACGGGATGGACAGCCTGCCCGCCATGGCCATCTTCGAACT  959
            .||||..||.||||||||||||||..|||||||.||||||||||.||||.|||.||||||||||||||.|||||
Sbjct  889  CGGCCGAGGCCCCCCGGGCGCCCCGTCAGCGGTCACGGGATGGATAGCCGGCCTGCCATGGCCATCTTTGAACT  962

Query  960  GCTGGACTATATTGTGAAAGAGCCGCCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTTG  1033
            .|||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTGGACTATATTGTGAACGAGCCACCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTTG  1036

Query 1034  TCAATAAATG---------------------------------CCT--CATCAAAAACCCAAC---------GG  1063
            ||||||||||                                 |||  |..|||..|||||.|         ||
Sbjct 1037  TCAATAAATGGTTCTGGGAGGGTCGCCAGCCCCACTCCATTCTCCTGCCCCCAAGCACCCAGCAGCACCTGTGG  1110

Query 1064  AGCGG------------------GCGGACC-----TAA--AGATGCTCACAAACCAC-GCCTTCATCAAG--CG  1109
            .|.||                  ||.||||     .||  ||.|||..|||..||.| |||  || ||.|  ||
Sbjct 1111  CGTGGGCTTCACAGGCATGTGCCGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCC--CA-CAGGGCCG  1181

Query 1110  GTCC--------GAG-----------GTGAAA--GAAGCGGA----TTTTGCC-----TGC-------------  1140
            ||||        |||           |||.||  |.|.||.|    |..||||     |||             
Sbjct 1182  GTCCATGTGTGTGAGCTCGGGACGCCGTGGAACGGCACCGCACTCCTGGTGCCGGAGTTGCCCCGGGCCCTTGG  1255

Query 1141  --------------------------------------------------------------------------  1140
                                                                                      
Sbjct 1256  CGTGCGCTCCGGCGATGTTGCCCCGGGCCTGGGGTTTTATTAGACAGTTAGCTGGGGTTGCGTCCAGGCTTCTG  1329

Query 1141  --------------------------------------------------------------------------  1140
                                                                                      
Sbjct 1330  ACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTCCCGCTGGGGGGTGTCCTGCCCCTGGCACCAA  1403

Query 1141  --------------------------------------------------------------------------  1140
                                                                                      
Sbjct 1404  AGTGCAGAGGTGGATCCCTCGTCCTCTGCCAGGAGGCAGAACAGAGCAGCCACTCTGTGCCACTCTCTCTGGTC  1477

Query 1141  -----------------------------------------------------------  1140
                                                                       
Sbjct 1478  GGAGAGATCCAGGCCCCCTCCGACCACGGCCCACACGCGGGTGCCCCGGGGCCACCAGC  1536