Nucleotide Global Alignment

Description

• Query: TRCN0000477744
• Subject: XM_017026990.1
• Aligned Length: 1352
• Identities: 944
• Gaps: 307

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGATGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCGTCCCCAAC  74
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  ---AGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  219
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  220  ACCTCAGAGCTGGACGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  293
            |.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  294  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCACCAGGTCCTGCACG  367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  368  AGTGCAACTCACCGTACATCGTGGGCTTCTACGGGGCCTTCTACTGTGACAGGGAGATCAGCATCTGCATGGAG  441
            |.||||||||.|||||||||||||||||||||||||||||||||.|||||.|||||||||||||.||||||||.
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  442  CACATGGATGGCGGCTCCCTGGACCAGGGGCTGAAAGAGGCCAAGAGGATTCCCGAGGACATCCTGGGGAAAGT  515
            ||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  516  CAGCATTGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAAATGTGAAGCCCT  589
            ||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  590  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  664  ATGGCCAACTCCTTCATGGGCACGCGCTCCTACATGG------CTCCGGAGCGGTTGC---AGGG------CAC  722
            |||||||||||||||.|||||||||||||||||||||      ||||..|||   |||   |.||      |||
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCACCTCCTAAGC---TGCCCAACGGTGTGTTCAC  737

Query  723  ACATTACTCGGTGCAGTCGGTCA---------TCT-GGAGCATGGACCTGTCCCTGGTGGAGCTGGCCATCGAA  786
            .|...|||....|.|||..||||         ||| ||||..|.| ||.|.|||                    
Sbjct  738  CCCCGACTTCCAGGAGTTTGTCAATAAATGGTTCTGGGAGGGTCG-CCAGCCCC--------------------  790

Query  787  AGGTACCCCATCCCCCCGCCCGACGCCAAG----GAGCTGGAGGCCATCTTTGGC----------CAG------  840
                ||.||||.|.||.||||    |||||    .|||.|     ||.||.||||          |||      
Sbjct  791  ----ACTCCATTCTCCTGCCC----CCAAGCACCCAGCAG-----CACCTGTGGCGTGGGCTTCACAGGCATGT  851

Query  841  CCCGTGGTCGACAGGGAAGAA-----GGAGA-------GCCTCACAGCATCTCCTCTTGGCCAGGGTCC-----  897
            .|||..|.|.||.||||||.|     |||.|       ||| |||||           ||||  |||||     
Sbjct  852  GCCGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCC-CACAG-----------GGCC--GGTCCATGTG  911

Query  898  ------CCCGGG-CGCCCCAACAGCGGTTACGGGA---------TGGACAGCC-----TGCCC---GCCAT---  944
                  |.|||| ||||      |.|| .||||.|         |||  .|||     |||||   |||.|   
Sbjct  912  TGTGAGCTCGGGACGCC------GTGG-AACGGCACCGCACTCCTGG--TGCCGGAGTTGCCCCGGGCCCTTGG  976

Query  945  ----------GGCCATCTT-----CGAACTGCTGGACTATATTGTGAAAG--AGC------CGCCTCCTAAG--  993
                      |||.||.||     .|..|||  ||..|.|||| .||.||  |||      .||.|||  ||  
Sbjct  977  CGTGCGCTCCGGCGATGTTGCCCCGGGCCTG--GGGTTTTATT-AGACAGTTAGCTGGGGTTGCGTCC--AGGC  1045

Query  994  --CTGCCCAA-----CGGTGTGT-----------------TCACC--CCCGACTTCCAGGAGTTTGTCAATAAA  1041
              |||.||.|     |||.||.|                 |||||  ||||     |.||.|..||||     .
Sbjct 1046  TTCTGACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTCCCG-----CTGGGGGGTGTC-----C  1109

Query 1042  TGCC----TCATCAAA------------AACCC---------------------AACGGAGC------------  1066
            ||||    .||.||||            |.|||                     |||.||||            
Sbjct 1110  TGCCCCTGGCACCAAAGTGCAGAGGTGGATCCCTCGTCCTCTGCCAGGAGGCAGAACAGAGCAGCCACTCTGTG  1183

Query 1067  -----------GGGCGGACCTAAAGAT------GCTCACAAACCAC-GCCTTCATCAAGCGG--TCCGAGGTGA  1120
                       ||.|||    |.||||      .|.|.|..||||| |||  || ||.||||  .||..||.|.
Sbjct 1184  CCACTCTCTCTGGTCGG----AGAGATCCAGGCCCCCTCCGACCACGGCC--CA-CACGCGGGTGCCCCGGGGC  1250

Query 1121  AAGAAGCGGATTTTGCCTGC  1140
            .|..|||             
Sbjct 1251  CACCAGC-------------  1257