Nucleotide Global Alignment
Description
- Query:
- TRCN0000477826
- Subject:
- XM_006530202.3
- Aligned Length:
- 3265
- Identities:
- 1491
- Gaps:
- 1595
Alignment
Query 1 ATGGACGACCTCGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTCCAAACGGCCTGTGTTCTT 74
||||||||||||||.|||||||||||.||||||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 1 ATGGACGACCTCGATGCCCTGCTGGCAGACTTGGAATCTACCACCTCCCACATCTCCAAACGGCCAGTGTTCTT 74
Query 75 GTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACCCCCCGTCC 148
|||.||||||.||||||||||.|||||||||||||||||||||||||||||||||||.||||||||.||.||||
Sbjct 75 GTCAGAGGAGCCCCCCTACTCCTACCCAACTGGAAACCACACATACCAGGAGATTGCGGTGCCACCTCCGGTCC 148
Query 149 CCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAGTGGCAGCCCAGCGGCTCC 222
|.|||||.||||||||||||||||||||||||||..||||.|||||.|||||.|||||||||||.||.||.|||
Sbjct 149 CACCACCACCGTCCAGCGAGGCCCTCAATGGCACGGTCCTGGACCCTTTAGATCAGTGGCAGCCTAGTGGTTCC 222
Query 223 CGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAA 296
.|||.|...|||||||||||||.||||.||...||.||||||.||||||||||.||||.||||||||.||||||
Sbjct 223 AGATACGCTCACCAGCAGCCTCCGTCCCCACTGCCCGTGTACAGCTCCAGTGCTAAAAATTCCAGTGCCTCCAA 296
Query 297 CCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGC 370
|.|.||||||.|.||.|||||.|..||.|||||||..||.|||||.||||||||||||||||||||||||||||
Sbjct 297 CACCCAGGACGGCGTGGGCTCCCTTTGTTCCCGAGCAGGCGAGGAAGAGCACGTCTACAGCTTCCCCAACAAGC 370
Query 371 AGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTG 444
||||.||.||.|||||.|||||.|||||.||||||.|.|||||||||||||||||.||||||||.|||||.|||
Sbjct 371 AGAAGTCGGCAGAGCCCTCACCTACCGTCATGAGCTCCTCCCTGGGCAGCAACCTCTCTGAACTTGACCGGCTG 444
Query 445 CTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTGCAGATGAGGCCAACTCAAGCCCCCCGCT 518
.|.|||||.||||||||.||.|||||.|.||||||.|||||||||||||||||.|||.|.||.|||||||| ||
Sbjct 445 TTACTGGAGCTGAACGCAGTGCAGCACAGCCCGCCTGGCTTCCCTGCAGATGAAGCCGAATCGAGCCCCCC-CT 517
Query 519 T-CCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTG 591
| |||||.||||||||||||||.|||||..|||||||.|.|||||..||||||||.||||||||.|||||||||
Sbjct 518 TGCCTGGAGCCCTGAGCCCCCTTTATGGCATCCCAGAAAATAACACTCCCTTGGGGGGCAAAGCGGGGCCCCTG 591
Query 592 ACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGA 665
..||||||||||||.|||||.|||||.||||||||.||||||||.|||||||||||.||||||||.||||||||
Sbjct 592 GTGAAAGAGAAGCCAAAGCGAAATGGAGGCCGGGGGCTGGAGGATGTGCGGCCCAGCGTGGAGAGCCTCTTGGA 665
Query 666 TGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGC 739
||||||||||||.||||||||||||||.|||||.||||||||||||||||||||.|||||||||||.|||||||
Sbjct 666 TGAACTGGAGAGTTCCGTGCCCAGCCCTGTCCCGGCCATCACTGTGAACCAGGGAGAGATGAGCAGTCCGCAGC 739
Query 740 GCGTCACCTCCACCCAACAGCAGACACGCATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACGAGCTGATGGCT 813
|.||||||||||.|||.||||||||.||.||||||||||||||||||||||||||||||||||||||.|||||.
Sbjct 740 GAGTCACCTCCAGCCAGCAGCAGACCCGGATCTCGGCCTCCTCTGCCACCAGGGAGCTGGACGAGCTCATGGCG 813
Query 814 TCGCTGTCGGATTTCAA--------------------------------------------------------- 830
||.|||||.||||||||
Sbjct 814 TCACTGTCAGATTTCAAGACTAGCACTTCTGCTGTGCTGCTGAGCTCCCAGGGGCTGCTGCCCGGCTCTTCTCC 887
Query 831 -------------------------------------------------------------------------- 830
Sbjct 888 ACCCCCGCCCCTCACCCTCCTTCATCCTCCTCTTCCTCCCACTAACTCCTCCCCTGGAGACCACACCCCAGAGG 961
Query 831 -------------------------------------------------------------------------- 830
Sbjct 962 CCCTCTACACAGAAGGAAGTAGTCAGGTCCTTTTACCTTCTGTGGCTCCCAGATGGCTTGGTTTGGGTAGTCCT 1035
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1036 GAGGAGACGTCTGACACTCAAAATTCAAGGTATCCTTCTGTGGCGGCTTCTCAACAGTCACGTGGTGCGAAGAG 1109
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1110 CCAGGCTCAAGTTAGGTGTGGCCTGATGGGTGCTGTGGGTCCCCCCTCTAGGACTCCCCCATGCCACACTCCAT 1183
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1184 ACCCTGCAAGGAGCATAGGGTCCCCGGGGCCACTGGCCAACCATGTGTTTTCAGAGGAGACTGTGGCTCCCATT 1257
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1258 TGGGGACAGCCACAGGCTCTGACAGCATCCAGGCCTGAGAGTCCCCATGGAGTGACTTACAGCTTTCAGGAAGG 1331
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1332 GCTTGAGCCACCCGCCGTGGCATTAGATCGGCAAGATATCCTTCCTGACACCTGGGCTCTCACCAAGGAGTGTG 1405
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1406 CCCTGCAGGAGAGGGTACAGTCAGAACCAGAGGGCCTGGGAAGCACTTGTCCTGCCGCAGGGGACAAGGAGCCG 1479
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1480 CTCCGTGGGAAGACTCCCCAGAAGGGAAGCCTTGGGGGACCCACTGAGGCACTCGGGAGCCCAGGGAACCCAGA 1553
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1554 AGGTACCACTGAAGCCACTCTGGAGGCCAGGAAGGAGCAGCCGGAGCCTTCTTATGCCATGGCCGTGGGGACAC 1627
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1628 CCAGCGTCTCGGAGAGGATTTCCACCTCCGGCCAGATCCGCTCTGTGATCAGGAGGAGCCGGGAGACGGGCCAC 1701
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1702 GTGCACCCCATGTCCCGGGAGCTTTCCCCTCGCCGCAGGCTGGACCCTGCCAGCCTGAGCAGGAACCCATCCCA 1775
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1776 GGAGCAGCTCATTGCTGAGCTGCAGGGCCGGCTGGGCATCCAGCTGGCGGCCGAGGAGGTGGCAGGGACCCCCG 1849
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1850 AGCAGGACTGGCTGACGGAAGGCGTTGTTATCACCGTGCAGCCACGTGGGAGGCAGGCCGGGGGGCAGTTGGTA 1923
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1924 GAGAAGGTTGTCTACCCTCCTGACTCTCCCGTTCCCCTGAGAAGAACCATCTCTGTTGTGGCTCCTTCTCCCCC 1997
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1998 TGCCCCTTTGCTCCAGGATCACCCTGACCCTTCGACTGGCAGCTCTCCTCTCCCACCCAGCCTGCCCACTCCCT 2071
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2072 CCTGGCCAGGGCCCTTGGCTGCTGCTTCTGCTTCATCTTCTGGGGTCCAGACTGAAGGGGGGAAGTCCCCAGAG 2145
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2146 GAGGGTGGGCGTGGCCCTCCTGGTCTCACCTCTGTGCCCCACACCGTGAGGTCTGTGGGCTGCCAGACCAATGA 2219
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2220 GGACCCACTCTTCTGCCCGATGCAGGCCGGCCTCCAGGCACCTTGCCCTGCCCGTGCCCTGTCTCGTCCCGAGC 2293
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2294 CACCTCCCAACTCTGAGGATGCTGCAGAGATGCAGGGCCTGGAACAGAGAGTGGATGGAGAGCGGCCGTGGGCA 2367
Query 831 --------------------------------------------------------GTTCATGGCCCAGGGGAA 848
||||||||||||||||||
Sbjct 2368 GCCAGCTGGCCCCCCAGCAGCAGGCAGAGCAGCCCCGAAGGGCAGGACGAGGGAGGGTTCATGGCCCAGGGGAA 2441
Query 849 GACAGGGAGCAGCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGC 922
.||.|||||||||||||||||||||||.|.|.|.|||||||||||||||||||||||||||.|||||||.||||
Sbjct 2442 AACTGGGAGCAGCTCACCCCCTGGGGGACTCTCCAAGCCCGGGAGCCAGCTGGACAGCATGTTGGGGAGTCTGC 2515
Query 923 AGTCTGACCTGAACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCC 996
||||.||||||||||||||.|||||||||||.||.||||||||.|||||.||.|||||||||||||||||||||
Sbjct 2516 AGTCCGACCTGAACAAGCTAGGGGTCGCCACCGTTGCCAAAGGGGTCTGTGGAGCCTGCAAGAAGCCCATCGCC 2589
Query 997 GGGCAGGTTGTGACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGAT 1070
||||||||.||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 2590 GGGCAGGTCGTGACCGCCATGGGGAAGACATGGCACCCCGAGCACTTTGTGTGCACCCACTGCCAGGAGGAGAT 2663
Query 1071 CGGATCCCGGAACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGC 1144
.||||||||.|||||.||.||||||||.|||||||||||||||||.|||||||||||||.||||||||||||.|
Sbjct 2664 TGGATCCCGAAACTTTTTTGAGCGGGACGGACAGCCCTACTGTGAGAAGGACTACCACAGCCTCTTCTCCCCAC 2737
Query 1145 GCTGCTACTACTGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACAC 1218
|||||||||||||||||||.||||||||||||||||||||||||||.||.|||||.||.||||||||.||||||
Sbjct 2738 GCTGCTACTACTGCAACGGACCCATCCTGGATAAAGTGGTGACAGCGCTGGACCGCACATGGCACCCGGAACAC 2811
Query 1219 TTCTTCTGTGCACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCG 1292
|||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||.||||||||
Sbjct 2812 TTCTTCTGTGCCCAGTGTGGAGCCTTCTTTGGTCCAGAAGGCTTCCACGAGAAGGACGGCAAAGCGTACTGTCG 2885
Query 1293 CAAGGACTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAG 1366
.||.||.||||||||||||||.||.||||||||.||||||||||||||.|||||||||||||||||.||.||||
Sbjct 2886 TAAAGATTACTTCGACATGTTTGCTCCCAAGTGCGGCGGCTGCGCCCGTGCCATCCTGGAGAACTACATTTCAG 2959
Query 1367 CCCTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTC 1440
||||||||||.||.|||||.||.||.||||||||||||.||||.||||||||.||.|||||.||||||||||||
Sbjct 2960 CCCTCAACACCCTCTGGCACCCCGAATGCTTTGTGTGCAGGGAGTGCTTCACACCCTTCGTCAACGGCAGCTTC 3033
Query 1441 TTCGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCA 1514
||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||
Sbjct 3034 TTTGAGCACGACGGGCAGCCGTACTGTGAGGTCCACTACCACGAGCGGCGCGGCTCGCTGTGCTCCGGCTGCCA 3107
Query 1515 GAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCT 1588
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||.|||||.|
Sbjct 3108 GAAGCCCATCACGGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCATTTCGTGTGCGCCTTTT 3181
Query 1589 GCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAGG 1662
||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||.||||.|||||||.|.|.|
Sbjct 3182 GCCTGAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAACCCTACTGCCAGAGCTGCTTCGTGAAG 3255
Query 1663 CTCTTCTGC 1671
|||||||||
Sbjct 3256 CTCTTCTGC 3264
