Nucleotide Global Alignment
Description
- Query:
- TRCN0000477826
- Subject:
- XR_002957365.1
- Aligned Length:
- 3920
- Identities:
- 1342
- Gaps:
- 2575
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGGGTGTTTGGAGTCCAAGAGACCTGAGATCAGAGTCCAGCATTGTCACTTCATCCAGCCTTGGCAGTGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATGTGACTCTGCCTCTGAACCGCAGTTATACCATCTGTGCTGGTGGCGTTGTGAGGATGGCAGGTAACAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAGCTCCTGGCCCCAGTGGGCCTTCAAGGATGGCAGCTGCTCCTGCCCCCTACTGGGGTTGCACTCATTCGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCCTGCTCTGGGGAGTCCTATGGGGTTTCTTAGCTGGCCCTGCCCATGGTGGAGAAAGAGGGATCCACCCATT 296
Query 1 --------------------AT--GGAC---------------GACCTC-GACGCCCTGCTGGCGGACTTGGAG 36
|| |||| |||..| ||||||||||||||||||||||||
Sbjct 297 GCTGATTGGGCCCAGAGGAAATGAGGACACTGCGTGAAGCCAAGACAGCAGACGCCCTGCTGGCGGACTTGGAG 370
Query 37 TCTACCACCTCCCACATCTCCAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAA 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTACCACCTCCCACATCTCCAAACGGCCTGTGTTCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAA 444
Query 111 CCACACATACCAGGAGATTGCCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCACACATACCAGGAGATTGCCGTGCCACCCCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAA 518
Query 185 TCCTTGACCCCTTAGACCAGTGGCAGCCCAGCGGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCT 258
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCCTTGACCCCTTAGACCAGTGGCAGCCCAGCAGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCT 592
Query 259 GTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGTACGGCTCCAGTGCCAAAACTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGT 666
Query 333 GGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCA 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGTGAGGAGGAGCACGTCTACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCA 740
Query 407 CGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGTCCCTGGGCAGCAACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCA 814
Query 481 GGCTTCCCTGCAGATGAGGCCAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGA 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCTTCCCTGCAGATGAGGCCAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGA 888
Query 555 GACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCC 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACTAACAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCC 962
Query 629 TGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCC 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTGCC 1036
Query 703 ATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGC 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCATCTCGGC 1110
Query 777 CTCCTCTGCCACCAGGGAGCTGGACGAGCTGATGGCTTCGCTGTCGGATTTCAA-------------------- 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCCTCTGCCACCAGGGAGCTGGACGAGCTGATGGCTTCGCTGTCGGATTTCAAGACCAGCTCCTCCACTGTGG 1184
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1185 CTCTGAGTGCCCCGGGGCTGTCCAGCTCTGCTCCGTCCTCATACTGCTCCCTTCCTCCTTCTCCTCCTCCCATG 1258
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1259 CCATCTGTATTTCTGCCACCCACCACTATACCCTCCCCTCGAGGCCAGGGCCACACTCCGGAGTTCCCTTGTAC 1332
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1333 TGAGCAGAGTGGACGAGGCCTTCTACCTCCTGTAGCCCCCAGCTGGCTTGATTTGGCTGGTCTTGGGGTGATGC 1406
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1407 CTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGGCAGTGGGCACAGAGAGTCAGGGTCGA 1480
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1481 GATTGGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTGGGGCTCCCCGCTGCCACACTGTACCCTGTGCTGG 1554
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1555 GAGCACAGCTCTCCAAGAGCCTGGGGAGCCCCAGGGGCCACCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGG 1628
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1629 CTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTATTCGGGCCTGAGAGAATGCCCCCCTCTGGAGCTGCTCGA 1702
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1703 AGCTTCCAAGAAGTAACAGAGCCAGCTGTAGTGGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCT 1776
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1777 CACGGAGGAACATGGCCTACAGCAGGAGAGGCCAAGGCCAGAGCCAGGGAGGCTGGGAAGCAGCTCCCCTGCCT 1850
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1851 CAGTTACCACGGAGCAGCTAGGTGCAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAA 1924
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1925 ACCCCAAGGAGCCCAGAGGGCACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGC 1998
Query 831 -------------------------------------------------------------------------- 830
Sbjct 1999 CATGGCCATGGGCACACCCAGCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGATCTGTGATCAGGAGGA 2072
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2073 GCTGGGAGTCTGGCCACGCACACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGACCCTGCCACCTTG 2146
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2147 AGCAGGACCCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGGA 2220
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2221 GCCGGCGGAGGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCAGCCACGTG 2294
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2295 GGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGTTGTCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAGAACC 2368
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2369 ATCTCTGTCCTGGCTTCTCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGCTCTTCTCC 2442
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2443 CCTGCCCAGCCTGCTCGCCTCCTCCCCCCTGGGGCCCTCAGCTTATACCTGTGGTTCTTCTGGGGTCCAGAGTG 2516
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2517 CAGGGGAAGAGCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCCCATTCCTGCACCCCACACCATGAGGTCC 2590
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2591 GTGGGCTGCCAGACTGATGAGGACCCGCTCTTCCCCCCGATGCAGGCAGGCCTTAAAGGAGCCCCTCCCTTTCT 2664
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2665 GTCCCCTGTCCTAATGCCTGAGCCATCCCCCACTCTGCACACACACACGTGCACACACACATACACAGATACCC 2738
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2739 TCCATCCCTCCATCTACAAGCCCCAGCACAGTAACCACAGTCCTGCCGTAAACCTTGACCCCGGTCTTCCCCCA 2812
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2813 CTCAGAAGGTCCGCTGCCCTCTTGCTTTTCTGTGGGTCCACCCATGTCTGCTCCTTCCTCGACTGGTCCTCAGT 2886
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2887 ACTGCCCCGGGCTCCCATCGAGGAAAGAAGCCACTCCAGAAGGGAGACCAGAAACCTGTCTCCTCCCTTCCAGC 2960
Query 831 -------------------------------------------------------------------------- 830
Sbjct 2961 CCCCAGGCCCAGCGCCCGATCCAGGGCCTGGAGCAAAGAGCGGATGGGGAGCGGTGCTGGGCGGCCGGCTGGCC 3034
Query 831 ---------------------------------------------GTTCATGGCCCAGGGGAAGACAGGGAGCA 859
|||||||||||||||||||||||||||||
Sbjct 3035 TCGGGACGGCGGGCGGAGCAGCCCCGGAGGGCAGGACGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAGCA 3108
Query 860 GCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTG 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GCTCACCCCCTGGGGGGCCCCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTG 3182
Query 934 AACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGT 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AACAAGCTGGGGGTCGCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGT 3256
Query 1008 GACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GACCGCCATGGGGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGA 3330
Query 1082 ACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTAC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 ACTTCTTCGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTAC 3404
Query 1156 TGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTTCTGTGC 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TGCAACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTTCTGTGC 3478
Query 1230 ACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGACTACT 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 ACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGACTACT 3552
Query 1304 TCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCCCTCAACACG 1377
||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCA-------------------------------- 3594
Query 1378 CTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCTTCTTCGAGCACGA 1451
Sbjct 3595 -------------------------------------------------------------------------- 3594
Query 1452 CGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGGCTGCCAGAAGCCCATCA 1525
Sbjct 3595 -------------------------------------------------------------------------- 3594
Query 1526 CCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTCTGTGCCTTCTGCCTCAAGCAG 1599
Sbjct 3595 -------------------------------------------------------------------------- 3594
Query 1600 CTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGAACTGCTTCCTCAGGCTCTTCTGC 1671
Sbjct 3595 ------------------------------------------------------------------------ 3594
