Nucleotide Global Alignment
Description
- Query:
- TRCN0000477873
- Subject:
- XM_005248135.3
- Aligned Length:
- 3111
- Identities:
- 1644
- Gaps:
- 1467
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGATTTCGGGTTTGGGGTGCTGCAGACCGCCCCGCTCCGAAGTAGCAGTCCTGGGCCCCTGTTCTGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGCGTATGGTCCTTACGCCGTGGGGTCCGTCAACCCGCTGCCCTCCGCCACGCCCTTCGGCCCACTGTCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACCACCGTTGCCTGTCACCGGCTTCTTAGAGGCCGCCTCCCCCTTCTCCGTCCCCCTCGGCGGCGGCGCGGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCGGCCGCCGCCGCTTCCTCTTCCTCCCCGTTCCTGGCGCATCAGCAGACCATGCAGGATGAGCTGCTTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAAACTCCCCGACCACCACCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCACCCCTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGCAGGACTTCAGTAAGCGGCAGCAGCAGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGAGCAGCCAGAAGAGGAAAGAGTTCAGCCCTCCCCACCTTCCCCACCCTCCGGACTCGAAGCCGCCGCCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCCTCCGCCGCTCCACTGCCCCGGTCGGTTCAGCCCGCCGCCGCCGCCAGCCGGCCCGCTCCTCCAGCCGGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCTCGCTCAGCGCCAGCAGCAACAGCCGCCGCAGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACTTCGCCCCGCGGCAGCGTCCGGCAGACCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCGGCGCCGCCACGGAGGCGCGGGCAGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCAATGCGGGCTTGGCCTCCTCGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTCCCCCAACCACCCTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTCAACAGTCCCAGTAACCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTTCCACACCCGGGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGTCGCCGCCGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAGCCGCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGC 1258
Query 1 -----------------------------------------------------ATGCCGCCGCCCAGCCCCGAC 21
|||||||||||||||||||||
Sbjct 1259 CCGGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGCCGCCCAGCCCCGAC 1332
Query 22 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCCCGTGTC 1406
Query 96 GCCGCACGGCTGCACTGGGCTCAGCGTT---------------------------------------------- 123
||||||||||||||||||||||||||||
Sbjct 1407 GCCGCACGGCTGCACTGGGCTCAGCGTTCCGACGAGCGGCGGCGGCGGCGGCGGCTTCGGCGGCCCCTTCTCGG 1480
Query 124 --------------------CCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CTACCGCTGTGCCCCCTCCGCCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGCCGCCCGCGGCGCCG 1554
Query 178 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCAGGCGGCGGCCGCCGCCTT 1628
Query 252 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCTCCCTGGAGCAACCATCAGAGCA 1702
Query 326 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGA 1776
Query 400 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATT 1850
Query 474 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTA 1924
Query 548 ATACACTCTTACCCTTACAGGTAAGAAT---------------------------------------------- 575
||||||||||||||||||||||||||||
Sbjct 1925 ATACACTCTTACCCTTACAGGTAAGAATGGTGAGATCTAGTTTGCAGTTGCCAGCTTGGGGCTCAGATTCACTC 1998
Query 576 --------------------------------------------GGATCGAAGTAGAATGTATGACAGTTTGAA 605
||||||||||||||||||||||||||||||
Sbjct 1999 CAAGATAGTTGGTGCACTGCAGCCGGAACATCCAGAATAGACCAGGATCGAAGTAGAATGTATGACAGTTTGAA 2072
Query 606 TATGCACTCTTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCT 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TATGCACTCTTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCT 2146
Query 680 ATCCACATCCAGGAACTGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCC 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ATCCACATCCAGGAACTGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCC 2220
Query 754 CTCTTTCCAATAGATGATGGCTTGCTTGATGATGGTCACAGTGATCAAGTTGGAGTTTTAAATTCACCCACCTG 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CTCTTTCCAATAGATGATGGCTTGCTTGATGATGGTCACAGTGATCAAGTTGGAGTTTTAAATTCACCCACCTG 2294
Query 828 TTATTCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAG 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TTATTCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAG 2368
Query 902 ATATTGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCA 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATATTGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCA 2442
Query 976 GAAAGCAAGTCCTATTTTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACT 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAAAGCAAGTCCTATTTTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACT 2516
Query 1050 CATTGATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAG 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CATTGATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAG 2590
Query 1124 TTCAAATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 TTCAAATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAA 2664
Query 1198 ACAATTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGG 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ACAATTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGG 2738
Query 1272 TGGAGTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCT 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TGGAGTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCT 2812
Query 1346 CCAATCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGT 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CCAATCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGT 2886
Query 1420 GTGGAGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATT 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GTGGAGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATT 2960
Query 1494 TGCTCCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTC 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TGCTCCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTC 3034
Query 1568 GTGCTGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGG 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GTGCTGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGG 3108
Query 1642 AAC 1644
|||
Sbjct 3109 AAC 3111
