Nucleotide Global Alignment

Description

Query:
TRCN0000477911
Subject:
XM_011542871.1
Aligned Length:
3078
Identities:
1850
Gaps:
1227

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTTCCTCTTGGAAACTAATGCTGTTTCTGTCAGTCACCATGTGTCTTTCAGAAAGTGTGGACTATGGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTTTTTGTGCAAGAACCAGATGATATTATTTTTCCAACTGATTCTGATGAAAAGAAGGTAGCATTGAATTGTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGTTCGTGGCAATCCAGTTCCCAGTTACAGATGGCTTCGAAATGGAACAGAAATAGATCTGGAAAGTGATTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGCTACAGTTTGATAGATGGCACCTTCATTATAAGCAATCCAAGTGAAGCAAAGGATTCTGGTCATTATCAGTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTAGCAACCAACACTGTGGGGAGTATTCTTAGTAGAGAAGCTACACTGCAGTTTGCCTATCTGGGAAATTTTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGGCCGGACAAGAAGTGCAGTCTCTGTGAGGGAAGGCCAGGGTGTCGTTCTGATGTGCTCTCCTCCGCCACAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCACCAGAGATCATCTATAGCTGGGTATTTAATGAGTTCCCTTCCTTTGTGGCGGAAGACAGCCGGCGGTTCAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTCCCAGGAGACAGGCAACCTTTATATTTCTAAAGTCCAAACATCAGATGTTGGCAGCTATATTTGTCTGGTGA  592

Query    1  --------------------------------------------------------------------ATGGGA  6
                                                                                ||||||
Sbjct  593  AAAACACAGTGACGAATGCTAGAGTCCTTAGTCCTCCAACGCCACTCACTCTGCGTAATGATGGTGTGATGGGA  666

Query    7  GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAATATGAGCCGAAAATTGAGGTCCATTTTCCTTTCACGGTTACAGCTGCTAAAGGAACAACTGTTAAGATGGA  740

Query   81  ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGCTTTGCACTTGGCAACCCCGTTCCAACAATCACATGGATGAAGGTTAATGGTTATATTCCTAGTAAGGCAC  814

Query  155  GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTCTGCGGAAATCTCAGGCGGTGCTGGAAATACCGAATGTACAGCTGGATGATGCAGGCATTTATGAGTGCAGA  888

Query  229  GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCTGAAAACTCACGTGGAAAAAATTCCTTTCGTGGACAATTACAAGTATACACCTACCCACACTGGGTAGAAAA  962

Query  303  ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACTGAATGATACTCAGTTAGACAGTGGGAGCCCTCTCCGATGGGAATGTAAGGCTACTGGAAAACCCAGACCCA  1036

Query  377  CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CGTATCGTTGGCTGAAGAATGGAGTACCCCTCTCACCTCAGAGTAGGGTTGAGATGGTTAATGGAGTATTGATG  1110

Query  451  ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATCCACAATGTGAATCAATCAGATGCTGGAATGTATCAGTGTTTGGCTGAAAATAAGTATGGAGCCATTTACGC  1184

Query  525  TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TAGTGCTGAGCTGAAGATTCTAGCTTCAGCTCCCACTTTTGCACTGAATCAACTGAAGAAAACAATAATTGTTA  1258

Query  599  CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCAAAGACCAAGAAGTTGTCATAGAGTGCAAACCCCAAGGCTCTCCAAAACCAACCATCTCTTGGAAGAAAGGA  1332

Query  673  GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA  746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GACAGAGCAGTTAGAGAAAACAAAAGAATAGCTATTCTTCCAGACGGGAGTCTACGGATCCTAAATGCTTCCAA  1406

Query  747  ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG  820
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ATCAGACGAGGGAAAGTACGTTTGCCGAGGGGAAAACGTCTTTGGTTCTGCTGAAATTATAGCTTCGCTATCTG  1480

Query  821  TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TAAAAGAACCTACAAGGATAGAACTTACTCCTAAAAGAACAGAATTGACAGTGGGAGAAAGCATTGTCCTTAAT  1554

Query  895  TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGCAAAGCAATTCACGATGCTAGTTTGGATGTCACTTTCTACTGGACTCTGAAAGGACAGCCTATTGATTTCGA  1628

Query  969  GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGATTTAATGATCAGGAACATCCTTC  1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGAAGAGGGTGGACATTTTGAAAGCATCAGGGCCCAAGCATCCTCTGCAGATTTAATGATCAGGAACATCCTTC  1702

Query 1043  TGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTT  1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TGATGCATGCTGGGAGATATGGCTGCAGGGTACAGACCACAGCAGACAGTGTGTCAGATGAGGCAGAACTTCTT  1776

Query 1117  GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGTACGGCCACACTGTCCTG  1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  GTTAGGGGACCCCCAGGCCCACCTGGGATAGTAATTGTTGAGGAAATAACCGAAAGTACGGCCACACTGTCCTG  1850

Query 1191  GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCT  1264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GAGCCCAGCAGCTGACAACCACAGCCCAATCTCCTCCTACAACCTTCAAGCTCGCAGCCCATTTTCCCTGGGCT  1924

Query 1265  GGCAAACAGTAAAGACAGTCCCAGAAATCATAACAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAAATCCC  1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GGCAAACAGTAAAGACAGTCCCAGAAATCATAACAGGGGACATGGAGTCAGCCATGGCTGTGGACCTAAATCCC  1998

Query 1339  TGGGTGGAATATGAATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGAAT  1412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TGGGTGGAATATGAATTTCGAGTGGTAGCCACCAACCCTATTGGGACAGGAGATCCAAGCACCCCATCTCGAAT  2072

Query 1413  GATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGT  1486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GATCCGCACAAATGAAGCAGTTCCGAAGACAGCACCCACCAATGTAAGCGGAAGAAGTGGAAGAAGGCATGAGT  2146

Query 1487  TAGTCATTGCCTGGGAGCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTATATTGTGGCTTTCAGA  1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TAGTCATTGCCTGGGAGCCAGTATCTGAAGAGTTTCAGAATGGGGAAGGCTTCGGCTATATTGTGGCTTTCAGA  2220

Query 1561  CCCAATGGAACACGTGGCTGGAAGGAAAAAATGGTGACATCCTCTGAAGCTTCCAAATTCATTTATCGAGATGA  1634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CCCAATGGAACACGTGGCTGGAAGGAAAAAATGGTGACATCCTCTGAAGCTTCCAAATTCATTTATCGAGATGA  2294

Query 1635  AAGTGTCCCTCCTCTTACTCCCTTTGAAGTGAAAGTTGGCGTTTATAACAATAAAGGAGATGGGCCTTTTAGTC  1708
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AAGTGTCCCTCCTCTTACTCCCTTTGAAGTGAAAGTTGGCGTTTATAACAATAAAGGAGATGGGCCTTTTAGTC  2368

Query 1709  AAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTCT  1782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  AAATTGTGGTCATCTGTTCAGCTGAAGGAGAACCCAGTGCTGCTCCCACAGATGTCAAGGCGACAAGTGTGTCT  2442

Query 1783  GTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGTCTAGGAAGACCACAGGGATTTGAGGTA-----  1851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.     
Sbjct 2443  GTGTCAGAGATTCTTGTTGCATGGAAACACATTAAAGAGAGTCTAGGAAGACCACAGGGATTTGAGGTTGGTTA  2516

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2517  CTGGAAAGACATGGAACAGGAAGATACAGCAGAAACAGTCAAAACTAGAGGGAATGAGTCTTTCGTCATCCTAA  2590

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2591  CAGGATTAGAAGGAAATACGTTATATCACTTCACAGTGAGGGCTTACAATGGAGCTGGATATGGGCCACCTAGC  2664

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2665  AGTGAAGTGAGTGCAACCACCAAGAAATCCCCTCCTAGTCAAGCACCTAGCAACCTCAGGTGGGAGCAGCAAGG  2738

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2739  CTCTCAGGTTTCTCTGGGCTGGGAACCCGTCATACCATTAGCCAACGAATCTGAAGTTGTGGGTTACAAGGTTT  2812

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2813  TTTATAGGCAAGAGGGTCACAGCAACAGCCAAGTTATTGAAACACAGAAACTTCAAGCAGTAGTACCACTCCCA  2886

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2887  GATGCTGGAGTCTATATTATTGAAGTTCGAGCATATAGTGAAGGAGGAGATGGAACAGCTAGTTCTCAAATTAG  2960

Query 1852  --------------------------------------------------------------------------  1851
                                                                                      
Sbjct 2961  GGTACCATCATATTCAGGTGGAAAAATCACAAGTGCACAGTCGACCCTTCACTCTCTCTCCACATCTTCGTCAT  3034

Query 1852  --------------------------------------------  1851
                                                        
Sbjct 3035  CAGTCACCTTGCTCTTGGCATTGATGATTCCTTCAACTTCCTGG  3078

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