Nucleotide Global Alignment

Description

Query:
TRCN0000477930
Subject:
NM_001042727.2
Aligned Length:
1407
Identities:
1153
Gaps:
111

Alignment

Query    1  ATGGCCACCAATAAGGAGCGACTCTTTGCGGC-TGG-------TGCCCTGGG--------GCCTGGATCTGGCT  58
            |||        ||     |||||       || |||       ||.||.|||        |.|||.||..|||.
Sbjct    1  ATG--------TA-----CGACT-------GCATGGAATCGTTTGTCCCGGGTCCGCGACGGCTGTATGGGGCG  54

Query   59  AC----CCAGGGGCAGGTTTCCCCTTCGCCTTCCCAGGGGCACT--CAGGGGGTCTCC-GCCTTTCGAGATGC-  124
            .|    ||.|||||.||.||        .||.|.|||.|.||||  |||     |||| ||  |||     || 
Sbjct   55  GCCGGGCCCGGGGCCGGCTT--------ACTACGCAGAGCCACTGGCAG-----CTCCTGC--TTC-----GCC  108

Query  125  -----TGAGCCCTAGCTTCCGGGGCCTGGGC-CAGCCTGACC--TCCCCAAGGAGATGGCCTCTCTGTCGGTGG  190
                 ||||.|.|   ||     |||||||| ||||||| ||  ||..|||                |||||||
Sbjct  109  GGACTTGAGTCTT---TT-----GCCTGGGCACAGCCTG-CCAGTCTACAA----------------TCGGTGG  157

Query  191  AGACACAGAGCACCAGCTCAGAGGAGATGGTGCCCAGCTCGCCCTCGCCCCCTCCGCCTCCTCGGGTCTACAAG  264
            |||||||||||||||||||.|||||||||||.||||||||.|||||.|||||.||.||||||||||||||.|||
Sbjct  158  AGACACAGAGCACCAGCTCGGAGGAGATGGTACCCAGCTCTCCCTCACCCCCACCACCTCCTCGGGTCTATAAG  231

Query  265  CCATGCTTCGTGTGCAATGACAAGTCCTCTGGCTACCACTATGGGGTCAGCTCTTGTGAAGGCTGCAAGGGCTT  338
            ||||||||.||.||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  232  CCATGCTTTGTATGCAATGACAAGTCTTCTGGCTACCACTATGGGGTCAGCTCCTGTGAAGGCTGCAAGGGCTT  305

Query  339  CTTTCGCCGAAGCATCCAGAAGAACATGGTGTACACGTGTCACCGCGACAAAAACTGTATCATCAACAAGGTGA  412
            |||..|.||.|||||.|||||.|||||||||||.||.||||||||.||||||||||||||||||||||||||.|
Sbjct  306  CTTCAGACGCAGCATTCAGAAAAACATGGTGTATACATGTCACCGTGACAAAAACTGTATCATCAACAAGGTCA  379

Query  413  CCAGGAATCGCTGCCAGTACTGCCGGCTACAGAAGTGCTTCGAAGTGGGCATGTCCAAGGAAGCTGTGCGAAAT  486
            ||||.|||||.||||||||||||.|||||||.|||||.|||||||||||||||||||||||||||||..|.||.
Sbjct  380  CCAGAAATCGATGCCAGTACTGCAGGCTACAAAAGTGTTTCGAAGTGGGCATGTCCAAGGAAGCTGTAAGGAAC  453

Query  487  GACCGGAACAAGAAGAAGAAAGAGGTGAAGGAAGAAGGGTCACCTGACAGCTATGAGCTGAGCCCTCAGTTAGA  560
            ||.||.|||||||||||.||.|||||.||.||.||.||.||.||.|||||||||||.|||||.||.||||||||
Sbjct  454  GATCGAAACAAGAAGAAAAAGGAGGTAAAAGAGGAGGGCTCGCCCGACAGCTATGAACTGAGTCCACAGTTAGA  527

Query  561  AGAGCTCATCACCAAGGTCAGCAAAGCCCATCAGGAGACTTTCCCCTCGCTCTGCCAGCTGGGCAAGTATACCA  634
            .||.||||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||.||||
Sbjct  528  GGAACTCATCACCAAGGTCAGCAAAGCCCACCAGGAGACTTTTCCCTCACTCTGCCAGCTGGGCAAGTACACCA  601

Query  635  CGAACTCCAGTGCAGACCACCGCGTGCAGCTGGATCTGGGGCTGTGGGACAAGTTCAGTGAGCTGGCTACCAAG  708
            ||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||||.
Sbjct  602  CGAACTCCAGTGCAGATCACCGGGTGCAGCTGGACCTGGGGCTGTGGGACAAGTTCAGCGAGCTGGCCACCAAA  675

Query  709  TGCATCATCAAGATCGTGGAGTTTGCCAAGCGGTTGCCTGGCTTTACAGGGCTCAGCATTGCTGACCAGATCAC  782
            ||||||||||||||.|||||||||||.||||||.|||||||.||||||||||||||||||||.|||||||||||
Sbjct  676  TGCATCATCAAGATTGTGGAGTTTGCGAAGCGGCTGCCTGGTTTTACAGGGCTCAGCATTGCCGACCAGATCAC  749

Query  783  TCTGCTCAAAGCTGCCTGCCTAGATATCCTGATGCTGCGTATCTGCACAAGGTACACCCCAGAGCAGGACACCA  856
            .||||||||.|||||.||.||.||.|||||.||||||||.|||||.||||||||.|||||||||||||||||.|
Sbjct  750  GCTGCTCAAGGCTGCTTGTCTGGACATCCTAATGCTGCGGATCTGTACAAGGTATACCCCAGAGCAGGACACTA  823

Query  857  TGACCTTCTCCGACGGGCTGACCCTGAACCGGACCCAGATGCACAATGCCGGCTTCGGGCCCCTCACAGACCTT  930
            ||||.|||||.||.|||||||||||||||||.|||||||||||||||||.|||||.||||||||.||||||||.
Sbjct  824  TGACATTCTCGGATGGGCTGACCCTGAACCGAACCCAGATGCACAATGCTGGCTTTGGGCCCCTTACAGACCTC  897

Query  931  GTCTTTGCCTTTGCTGGGCAGCTCCTGCCCCTGGAGATGGATGACACCGAGACAGGGCTGCTCAGCGCCATCTG  1004
            ||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.||.||.||.|||||
Sbjct  898  GTCTTTGCCTTTGCCGGGCAGCTGCTGCCCCTGGAGATGGATGACACCGAGACTGGGCTACTTAGTGCTATCTG  971

Query 1005  CCTCATCTGCGGAGACCGCATGGACCTGGAGGAGCCCGAAAAAGTGGACAAGCTGCAGGAGCCACTGCTGGAAG  1078
            |||||||||.||||||||.|||||||||||.||||||||.||.||||||||||||||||||||.||||||||||
Sbjct  972  CCTCATCTGTGGAGACCGAATGGACCTGGAAGAGCCCGAGAAGGTGGACAAGCTGCAGGAGCCCCTGCTGGAAG  1045

Query 1079  CCCTGAGGCTGTACGCCCGGCGCCGGCGGCCCAGCCAGCCCTACATGTTCCCAAGGATGCTAATGAAAATCACC  1152
            ||||||||||.||.||||||||.|||.|.||||||||.|||||||||||||||||||||||.||||||||||||
Sbjct 1046  CCCTGAGGCTCTATGCCCGGCGACGGAGACCCAGCCAACCCTACATGTTCCCAAGGATGCTGATGAAAATCACC  1119

Query 1153  GACCTCCGGGGCATCAGCACTAAGGGAGCTGAAAGGGCCATTACTCTGAAGATGGAGATTCCAGGCCCGATGCC  1226
            |||||||||||||||||||||||||||||.||||||||.||.||.|||||||||||||||||||||||||||||
Sbjct 1120  GACCTCCGGGGCATCAGCACTAAGGGAGCAGAAAGGGCTATAACCCTGAAGATGGAGATTCCAGGCCCGATGCC  1193

Query 1227  TCCCTTAATCCGAGAGATGCTGGAGAACCCTGAAATGTTTGAGGATGACTCCTCGCAGCCTGGTCCCCACCCCA  1300
            .|||.|.|||||||||||||||||||||||.||.|||||||||||.|||||||||.|||||||.||||||||||
Sbjct 1194  ACCCCTGATCCGAGAGATGCTGGAGAACCCGGAGATGTTTGAGGACGACTCCTCGAAGCCTGGCCCCCACCCCA  1267

Query 1301  ATGCCTCTAGCGAGGATGAGGTTCCTGGGGGCCAGGGCAAAGGGGGCCTGAAGTCCCCAGCC------------  1362
            |.||.||.||.|||||.||.|.|||.|||||||||||||||.|||||| .|||||||||.||            
Sbjct 1268  AGGCTTCCAGTGAGGACGAAGCTCCAGGGGGCCAGGGCAAAAGGGGCC-AAAGTCCCCAACCTGACCAGGGGCC  1340

Query 1363  -  1362
             
Sbjct 1341  C  1341

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