Nucleotide Global Alignment
Description
- Query:
- TRCN0000477990
- Subject:
- NR_033818.2
- Aligned Length:
- 4026
- Identities:
- 1205
- Gaps:
- 2798
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGACGTCAGAGCAGGAAGTGTTTGAGGAAGTCGCGCCGCGCTGCCCGCGTTAAGATTCCCGCATTTTAATGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCAGGGGGGTGTCATAGCCCCGGGTTTGGCCGCCCCAGCCCCGCCTTCCCCGCCCCGGGGAGCCCGCCCCCTG 148
Query 1 --------------------------------------ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT 36
||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCGCGTCCCTGCCGACAGAGTTAGCACGACATCAGTATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT 222
Query 37 GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC 296
Query 111 AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA 370
Query 185 TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG 444
Query 259 GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT 518
Query 333 TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTG------------------ 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGGTAAATCCCAGTCCCGGA 592
Query 389 --------------------------------------CCTCTGCGCTTAGATACCTTCATGAAAACAGAATCA 424
||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTCAGGCCGTGTCCTTCAGGGAGAGTGTGGTGCCCCTCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCA 666
Query 425 TCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGAC 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGAC 740
Query 499 CTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCC 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCC 814
Query 573 AGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCA 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCA 888
Query 647 TCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAG 962
Query 721 GTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCT 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCT 1036
Query 795 TAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCA 1110
Query 869 CGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATC 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATC 1184
Query 943 TTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAG 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAG 1258
Query 1017 AATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCG 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCG 1332
Query 1091 ATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGTACACAC----------CA 1150
||||||||||||||||||||||||||||||||||| .|||| ||| ||||| .|
Sbjct 1333 ATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAG----GGC------CACACATTGGACATGGA 1396
Query 1151 TCCTGTTTACCTTGGCTGTGCCTCCTGGGAAACTCAAC----ACACTTTCAGATTT-----------CAATTCT 1209
||.||||| ||..||.||.|..| .|.|||.|||.| |.|| ||||||.| |||
Sbjct 1397 TCTTGTTT---TTCTCTTTGACAAC-AGTAAAATCACCTATGAGAC--TCAGATCTCCCCACGGCCCCAA---- 1460
Query 1210 GCTT-----TGTCA--TGTAGTCTGTTAATCACACAGTGC------GGATACCTGGCTGGTTTT---------- 1260
|.| ||||| ||||..|| ||| ||.|| ||| |.||.|| .||.|
Sbjct 1461 -CCTGAAAGTGTCAGCTGTATCCT-----TCA---AGAGCCCAAGAGGA-ATCTCGC--CTTCTTCCAGCTGAG 1522
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1523 GAAGGTGTGGGGCCAGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGC 1596
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1597 GAGCCGCCATGATGAATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCT 1670
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1671 CAGCAGCTCAAGGCCAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAAC 1744
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1745 CGAGTTTGGGATCACATCAGATAAACTGCTGCTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGC 1818
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1819 GGGAGAACGAAGTGAAACTCCTGGTAGAACGGATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGC 1892
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1893 CCCATGGGCCGGAAGCAGGGGGGAACGCTGGACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAG 1966
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1967 GGAAAAACCTCGAGACCAGCGAACTGAGGGTGACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGA 2040
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2041 GCTTCGAGAAGAAAGTGCGAGTGATCTATACGCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAA 2114
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2115 CTGTTGCCCAAGGTGGAAGAGGTGGTGAGCTTAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAA 2188
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2189 GCGGCAGAAGGAGCTCTGGAATCTCCTGAAGATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGG 2262
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2263 ATAGCATGAATGCCTCTCGACTTAGCCAGCCTGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTA 2336
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2337 CCTGAGCCAGCCAAGAAGAGTGAAGAACTGGTGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCAT 2410
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2411 ACAGGACACTGTGAGGGAACAAGACCAGAGTTTCACGGCCCTAGACTGGAGCTGGTTACAGACGGAAGAAGAAG 2484
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2485 AGCACAGCTGCCTGGAGCAGGCCTCATGATGTGGGGGGACTCGACCCCCTGACATGGGGCAGCCCATAGCAGGC 2558
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2559 CTTGTGCAGTGGGGGGACTCGACCCCCTGACATGGGGCTGCCTGGAGCAGGCCGCGTGACGTGGGGCTGCCTGG 2632
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2633 CCGCGGCTCTCACATGGTGGTTCCTGCTGCACTGATGGCCCAGGGGTCTCTGGTATCCAGATGGAGCTCTCGCT 2706
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2707 TCCTCAGCAGCTGTGACTTTCACCCAGGACCCAGGACGCAGCCCTCCGTGGGCACTGCCGGCGCCTTGTCTGCA 2780
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2781 CACTGGAGGTCCTCCATTACAGAGGCCCAGCGCACATCGCTGGCCCCACAAACGTTCAGGGGTACAGCCATGGC 2854
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2855 AGCTCCTTCCTCTGCCGTGAGAAAAGTGCTTGGAGTACGGTTTGCCACACACGTGACTGGACAGTGTCCAATTC 2928
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2929 AAATCTTTCAGGGCAGAGTCCGAGCAGCGCTTGGTGACAGCCTGTCCTCTCCTGCTCTCCAAAGGCCCTGCTCC 3002
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3003 CTGTCCTCTCTCACTTTACAGCTTGTGTTTCTTCTGGATTCAGCTTCTCCTAAACAGACAGTTTAATTATAGTT 3076
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3077 GCGGCCTGGCCCCATCCTCACTTCCTCTTTTTATTTCACTGCTGCTAAAATTGTGTTTTTACCTACTACTTTGG 3150
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3151 TGGTTGTCCTCTTTTCGGCAAAGTTGGAGCGAGTGCCAAGCTCTCCATCTGTGGTCCTTTCTGCCAAGAGCGAC 3224
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3225 TCATAGTAACCAGGATGGGAGAGCAGCTGCCTTATTCTGAATCCCAAAAATTACTTGGGGGTGATTGTCACAGA 3298
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3299 GGAGGGACAGAAAGGGTATCTGCTGACCACCAGCCTGCCTACCCATGCCCATGTCTCCATTCCTGCTCAAGCGT 3372
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3373 GTGTGCTGGGCCGGGGAGTCCCTGTCTCTCACAGCATCTAGCAGTATTATTAAATGGATTCATTTTAAAAATAG 3446
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3447 CTCCTATATTTTGTAACATGTCTCAAACACTCATACTGGGTTCCACAATCCACTGTTAGAATACCTATGGTTAG 3520
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3521 GGCTTCTGAACTAAAATAATGGAAAATTTTAACAATTTGTATAGTGCCTGGATCATTACTAGTGCCATAACCCT 3594
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3595 GCTTCTTCAACATTTCACAGAACTTCTCTTTTATATAAAGGCAAGAGCACAAAATGAGTTCAGATGATCACAAA 3668
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3669 CAGGTGAGTTTTGTTGGAGAAGAAAGTTGGAGTAGGAGACTTTCACAAGTGGTTTCCATGGAGATAGAATGAAG 3742
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3743 CATTCTGTGGTCAAGTAAGTTTAGGGAGCTATTCATGTTTCACTTGCTTTGTGGAGATTCACACTATGCACTGG 3816
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3817 GAAAGTATCTGAAAAGTCTTATAATAAAGAAACAGGCTTAACTTTGTGTAAGAACACTGTTTATCAATGTCATT 3890
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3891 TGGCTATAGAAACATTTTCTCCTGCTGATTGTGTGTGTGAAACATGTATTAACATTCCAATGAACTAGCATTTA 3964
Query 1261 ------------------------------ 1260
Sbjct 3965 ATAAAGCACAATTTTGGAAACCCTGGTAAA 3994
