Nucleotide Global Alignment
Description
- Query:
- TRCN0000477990
- Subject:
- NR_033819.2
- Aligned Length:
- 3908
- Identities:
- 1205
- Gaps:
- 2680
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGACGTCAGAGCAGGAAGTGTTTGAGGAAGTCGCGCCGCGCTGCCCGCGTTAAGATTCCCGCATTTTAATGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCAGGGGGGTGTCATAGCCCCGGGTTTGGCCGCCCCAGCCCCGCCTTCCCCGCCCCGGGGAGCCCGCCCCCTG 148
Query 1 --------------------------------------ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT 36
||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCGCGTCCCTGCCGACAGAGTTAGCACGACATCAGTATGAGCTGGTCACCTTCCCTGACAACGCAGACATGT 222
Query 37 GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAAC 296
Query 111 AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGA 370
Query 185 TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTG 444
Query 259 GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTT 518
Query 333 TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACC 592
Query 407 TTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCATGAAAACAGAATCATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTA 666
Query 481 ATACACAAAATTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGAC 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATACACAAAATTATTGACCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGAC 740
Query 555 CCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCA 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCA 814
Query 629 CCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAA 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAA 888
Query 703 GTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTT 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTT 962
Query 777 ACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGC 1036
Query 851 ACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAAC 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAAC 1110
Query 925 TTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCT 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCT 1184
Query 999 GCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGG 1258
Query 1073 GCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAG----GTGAGCCCTGGCTTCGT 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||| .|||| |||
Sbjct 1259 GCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAG----GGC----- 1323
Query 1143 ACACAC----------CATCCTGTTTACCTTGGCTGTGCCTCCTGGGAAACTCAAC----ACACTTTCAGATTT 1202
||||| .|||.||||| ||..||.||.|..| .|.|||.|||.| |.|| ||||||.|
Sbjct 1324 -CACACATTGGACATGGATCTTGTTT---TTCTCTTTGACAAC-AGTAAAATCACCTATGAGAC--TCAGATCT 1390
Query 1203 -----------CAATTCTGCTT-----TGTCA--TGTAGTCTGTTAATCACACAGTGC------GGATACCTGG 1252
||| |.| ||||| ||||..|| ||| ||.|| ||| |.||.|
Sbjct 1391 CCCCACGGCCCCAA-----CCTGAAAGTGTCAGCTGTATCCT-----TCA---AGAGCCCAAGAGGA-ATCTCG 1450
Query 1253 CTGGTTTT------------------------------------------------------------------ 1260
| .||.|
Sbjct 1451 C--CTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTGCAACC 1522
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1523 GGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGAAGAAT 1596
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1597 TCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGA 1670
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1671 GAAGTACAGCGAGCAAACCGAGTTTGGGATCAGAGAACGAAGTGAAACTCCTGGTAGAACGGATGATGGCTCTG 1744
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1745 CAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGGGGGAACGCTGGACGACCTAGAGGA 1818
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1819 GCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGCGAACTGAGGGTGACAGTCAGGAAA 1892
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1893 TGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGAGTGATCTATACGCAGCTCAGTAAA 1966
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 1967 ACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGAGGTGGTGAGCTTAATGAATGAGGA 2040
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2041 TGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGAATCTCCTGAAGATTGCTTGTAGCA 2114
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2115 AGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGACTTAGCCAGCCTGGGCAGCTGATG 2188
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2189 TCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAGTGAAGAACTGGTGGCTGAAGCACA 2262
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2263 TAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAACAAGACCAGAGTTTCACGGCCCTAG 2336
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2337 ACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTGGAGCAGGCCTCATGATGTGGGGGGACTCGA 2410
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2411 CCCCCTGACATGGGGCAGCCCATAGCAGGCCTTGTGCAGTGGGGGGACTCGACCCCCTGACATGGGGCTGCCTG 2484
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2485 GAGCAGGCCGCGTGACGTGGGGCTGCCTGGCCGCGGCTCTCACATGGTGGTTCCTGCTGCACTGATGGCCCAGG 2558
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2559 GGTCTCTGGTATCCAGATGGAGCTCTCGCTTCCTCAGCAGCTGTGACTTTCACCCAGGACCCAGGACGCAGCCC 2632
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2633 TCCGTGGGCACTGCCGGCGCCTTGTCTGCACACTGGAGGTCCTCCATTACAGAGGCCCAGCGCACATCGCTGGC 2706
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2707 CCCACAAACGTTCAGGGGTACAGCCATGGCAGCTCCTTCCTCTGCCGTGAGAAAAGTGCTTGGAGTACGGTTTG 2780
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2781 CCACACACGTGACTGGACAGTGTCCAATTCAAATCTTTCAGGGCAGAGTCCGAGCAGCGCTTGGTGACAGCCTG 2854
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2855 TCCTCTCCTGCTCTCCAAAGGCCCTGCTCCCTGTCCTCTCTCACTTTACAGCTTGTGTTTCTTCTGGATTCAGC 2928
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 2929 TTCTCCTAAACAGACAGTTTAATTATAGTTGCGGCCTGGCCCCATCCTCACTTCCTCTTTTTATTTCACTGCTG 3002
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3003 CTAAAATTGTGTTTTTACCTACTACTTTGGTGGTTGTCCTCTTTTCGGCAAAGTTGGAGCGAGTGCCAAGCTCT 3076
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3077 CCATCTGTGGTCCTTTCTGCCAAGAGCGACTCATAGTAACCAGGATGGGAGAGCAGCTGCCTTATTCTGAATCC 3150
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3151 CAAAAATTACTTGGGGGTGATTGTCACAGAGGAGGGACAGAAAGGGTATCTGCTGACCACCAGCCTGCCTACCC 3224
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3225 ATGCCCATGTCTCCATTCCTGCTCAAGCGTGTGTGCTGGGCCGGGGAGTCCCTGTCTCTCACAGCATCTAGCAG 3298
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3299 TATTATTAAATGGATTCATTTTAAAAATAGCTCCTATATTTTGTAACATGTCTCAAACACTCATACTGGGTTCC 3372
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3373 ACAATCCACTGTTAGAATACCTATGGTTAGGGCTTCTGAACTAAAATAATGGAAAATTTTAACAATTTGTATAG 3446
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3447 TGCCTGGATCATTACTAGTGCCATAACCCTGCTTCTTCAACATTTCACAGAACTTCTCTTTTATATAAAGGCAA 3520
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3521 GAGCACAAAATGAGTTCAGATGATCACAAACAGGTGAGTTTTGTTGGAGAAGAAAGTTGGAGTAGGAGACTTTC 3594
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3595 ACAAGTGGTTTCCATGGAGATAGAATGAAGCATTCTGTGGTCAAGTAAGTTTAGGGAGCTATTCATGTTTCACT 3668
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3669 TGCTTTGTGGAGATTCACACTATGCACTGGGAAAGTATCTGAAAAGTCTTATAATAAAGAAACAGGCTTAACTT 3742
Query 1261 -------------------------------------------------------------------------- 1260
Sbjct 3743 TGTGTAAGAACACTGTTTATCAATGTCATTTGGCTATAGAAACATTTTCTCCTGCTGATTGTGTGTGTGAAACA 3816
Query 1261 ------------------------------------------------------------ 1260
Sbjct 3817 TGTATTAACATTCCAATGAACTAGCATTTAATAAAGCACAATTTTGGAAACCCTGGTAAA 3876
