Nucleotide Global Alignment
Description
- Query:
- TRCN0000478076
- Subject:
- XR_001783763.1
- Aligned Length:
- 3120
- Identities:
- 1499
- Gaps:
- 1454
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTGTGTGTGTGATGGCCAGTCGTAGAGGATATGAATCTCAGTTGCATACAGTTGATTTAAGATCCTTGTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCACCCCACTTCTCACCTTTCCTGAGGATGACCAAATTTCTCTTTTTTCTCTTCCTTTCTGTCTCCACCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCTTCCTCGTTTTTTCTTCAGCTTCCTTGGGGAATCCCTCTCCCTTTCCCGTTCGTAGGCTCGGGACTGTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TAGAACTACCTTTCCCGGCTTGCTGTGCGCCGGGAGTAGGTGAGGGGTGGCGTGCGTGCCTGCCTCCCGGGGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACACGACTGCTGGGAAGTGATGTCCGCTTCCTGCCCTCCCTGCGTGTCTGAGGGCGTAGAGGAAGCCCGTAAAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACTACAAGTCCCAGAAGGCGGTGCGTCCGGAGTCTGGAGTAGGCTGGGGCCGAGCCGCCGGGCTCGCGGAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGCGGCGGCTGCTGCTAAGGCTGAAGGAGCCGGGCCGGGCCCGCGGCAGAGGCCGTGGCTGGAACTGGGAAGG 518
Query 1 -------------------------ATGGCGACGTCGGGGGCGAACGGGCCTGGTTCGGCCACGGCCTCGGCTT 49
|||||||||||.||||||||||||||.|||||.|||||.|||||.||.|
Sbjct 519 TGGCGGGGACGGACGCGGGGGTAAGATGGCGACGTCAGGGGCGAACGGGCCGGGTTCCGCCACAGCCTCAGCGT 592
Query 50 CCAATCCGCGCAAATTTAGTGAGAAGATTGCGCTGCAGAAGCAGCGTCAGGCCGAGGAGACGGCGGCCTTCGAG 123
|||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAATCCACGCAAGTTTAGTGAGAAGATTGCGCTGCAGAAGCAGCGTCAGGCCGAGGAGACGGCGGCCTTCGAG 666
Query 124 GAGGTGATGATGGACATCGGCTCCACCCGGTTACAGGCCCAAAAACTGCGACTGGCATACACAAGGAGCTCTCA 197
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct 667 GAGGTGATGATGGACATCGGCTCCACACGGTTACAGGCCCAAAAACTGCGACTGGCTTATACAAGGAGCTCCCA 740
Query 198 TTATGGTGGGTCTCTGCCCAATGTTAACCAGATTGGCTCTGGCCTGGCCGAGTTCCAGAGCCCCCTCCACTCAC 271
|||||||||.||||||||||||||||||||||||||||.|||||||||.|||||||||||||||||.|||||||
Sbjct 741 TTATGGTGGTTCTCTGCCCAATGTTAACCAGATTGGCTGTGGCCTGGCTGAGTTCCAGAGCCCCCTTCACTCAC 814
Query 272 CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGCTGGTGGAACGGGTGCAGCGAGATCCTCGAAGAATGGTG 345
|||||||||||||||||||||||||||||||||||.|||||||||||||.||.||||||.|.||.|||||||||
Sbjct 815 CTTTGGATTCATCTCGGAGCACTCGGCACCATGGGTTGGTGGAACGGGTACAACGAGATGCCCGCAGAATGGTG 888
Query 346 TCCCCACTTCGCCGATACACCCGCCACATTGACAGCTCTCCCTATAGTCCTGCCTACTTATCTCCTCCCCCAGA 419
||||||||.|||||||||.||||||||||||||||.|||||.|||||.||||||||.|||||||||||||||||
Sbjct 889 TCCCCACTCCGCCGATACCCCCGCCACATTGACAGTTCTCCATATAGCCCTGCCTATTTATCTCCTCCCCCAGA 962
Query 420 GTCTAGCTGGCGAAGGACGATGGCCTGGGGCAATTTCCCTGCAGAGAAGGGGCAGTTGTTTCGACTACCATCTG 493
||||.||||||||||||.||||.||||||||||..||||.||.||||||||||||||||||.||||.||.||||
Sbjct 963 GTCTGGCTGGCGAAGGATGATGCCCTGGGGCAACCTCCCAGCTGAGAAGGGGCAGTTGTTTAGACTGCCGTCTG 1036
Query 494 CACTTAACAGGACAAGCTCTGACTCTGCCCTTCATACAAGTGTGATGAACCCCAGTCCCCAGGATACCTACCCA 567
||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|..|||||.||.||.||.|||
Sbjct 1037 CACTTAACAGGACAAGCTCTGACTCTGCTCTTCACACAAGTGTGATGAACCCTAACCCCCAAGACACTTATCCA 1110
Query 568 GGCCCCACACCTCCCAGCATCCTGCCCA---GCCGACGTGGGGGTATTCTGGATGGTGAAATGGACCCCAAAGT 638
|||||||||||||||||..||||||||| |||||.|.||.|||.|||||||||||||.|||||..|.|||||
Sbjct 1111 GGCCCCACACCTCCCAGTGTCCTGCCCAGCCGCCGAGGAGGAGGTTTTCTGGATGGTGAGATGGATGCTAAAGT 1184
Query 639 ACCTGCTATTGAGGAGAACTTGCTAGATGACAAGCATTTGCTGAAGCCATGGGATGCTAAGAAGCTATCCTCAT 712
.||||||||||||||||||.||.||||||||||||||.|||||||.||.|||||||||||||||||.|||||||
Sbjct 1185 CCCTGCTATTGAGGAGAACGTGGTAGATGACAAGCATCTGCTGAAACCTTGGGATGCTAAGAAGCTGTCCTCAT 1258
Query 713 CCTCTTCCCGACCTCGGTCCTGTGAAGTCCCTGGAATTAACATCTTTCCATCTCCTGACCAGCCTGCCAATGTG 786
|.||.||.||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||
Sbjct 1259 CTTCCTCTCGACCTCGATCCTGTGAAGTCCCTGGAATCAACATCTTTCCATCTCCTGACCAGCCTGCTAATGTG 1332
Query 787 CCTGTCCTCCCACCTGCCATGAACACGGGGGGCTCCCTACCTGACCTCACCAACCTGCACTTTCCCCCACCACT 860
||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||.||.||.|||||
Sbjct 1333 CCTGTCCTCCCACCTGCCATGAACACAGGAGGCTCCCTACCTGACCTCACCAACCTACACTTCCCTCCTCCACT 1406
Query 861 GCCCACCCCCCTGGACCCTGAAGAGACAGCCTACCCTAGCCTGAGTGGGGGCAACAGTACCTCCAATTTGACCC 934
||||||.||||||||||||||.|||||||.|||.||.||||||||||||||||||||||||.||||||||||||
Sbjct 1407 GCCCACACCCCTGGACCCTGAGGAGACAGTCTATCCCAGCCTGAGTGGGGGCAACAGTACCACCAATTTGACCC 1480
Query 935 ACACCATGACTCACCTGGGCATCAGCAGGGGCATGGGCCTGGGCCCAGGCTATGATGCACCAGGACTTCATTCA 1008
|.||.|||||.||..||||||||||..|.||..|||||.|||||||..|||||||||.||
Sbjct 1481 ATACTATGACCCATTTGGGCATCAGTGGAGGTCTGGGCTTGGGCCCCAGCTATGATGTAC-------------- 1540
Query 1009 CCTCTCAGCCACCCATCCCTGCAGTCCTCCCTAAGCAATCCCAACCTCCAGGCTTCCCTGAGCAGTCCTCAGCC 1082
Sbjct 1541 -------------------------------------------------------------------------- 1540
Query 1083 CCAGCTTCAGGGCTCCCACAGCCACCCCTCTCTGCCTGCCTCCTCCTTGGCCCGCCATGTACTGCCCACCACCT 1156
Sbjct 1541 -------------------------------------------------------------------------- 1540
Query 1157 CCCTGGGCCACCCCTCACTCAGTGCTCCGGCTCTTTCCTCCTCCTCTTCCTCCTCCTCCACTTCATCTCCTGTT 1230
Sbjct 1541 -------------------------------------------------------------------------- 1540
Query 1231 TTGGGCGCCCCCTCTTACCCTGCTTCTACCCCTGGGGCCTCCCCCCACCACCGCCGTGTGCCCCTCAGCCCCCT 1304
Sbjct 1541 -------------------------------------------------------------------------- 1540
Query 1305 GAGTTTGCTCGCGGGCCCAGCCGACGCCAGAAGGTCCCAACAGCAGCTGCCCAAACAGTTTTCGCCAACAATGT 1378
Sbjct 1541 -------------------------------------------------------------------------- 1540
Query 1379 CACCCACCTTGTCTTCCATCACTCAGGGCGTCCCCCTGGATACCAGTAAACTGTCCACTGACCAGCGGTTACCC 1452
||||||||.|||.||||||||||||||.||.|.|||||||||||.||.|||
Sbjct 1541 -----------------------CAGGGCGTTCCCTTGGATACCAGTAAATTGCCTACTGACCAGCGATTGCCC 1591
Query 1453 CCATACCCATACAGCTCCCCAAGTCTGGTTCTGCCTACCCAGCCCCACACCCCAAAGTCTCTACAGCAGCCAGG 1526
|||||||||||.|||.||||||||||.|||.|.||.|||||.||.|.|||||||||||||||||||||
Sbjct 1592 CCATACCCATATAGCCCCCCAAGTCTAGTTATACCCACCCATCCACCCACCCCAAAGTCTCTACAGCA------ 1659
Query 1527 GCTGCCCTCTCAGTCTTGTTCAGTGCAGTCCTCAGGTGGGCAGCCCCCAGGCAGGCAGTCTCATTATGGGACAC 1600
|.|||||||||||.|.||.|.|||||||.||||||||||.|||||.||||||||||||.|.|||||||||.|||
Sbjct 1660 GTTGCCCTCTCAGGCCTGCTTAGTGCAGCCCTCAGGTGGACAGCCTCCAGGCAGGCAGCCACATTATGGGGCAC 1733
Query 1601 CGTACCCACCTGGGCCCAGTGGGCATGGGCAACAGTCTTACCACCGGCCAATGAGTGACTTCAACCTGGGGAAT 1674
.|||||||||||||.|||||||.||||||||||||.||||||||||.|||||.|.||||||||.|.||||||||
Sbjct 1734 TGTACCCACCTGGGTCCAGTGGACATGGGCAACAGCCTTACCACCGCCCAATAAATGACTTCAGCTTGGGGAAT 1807
Query 1675 -------------------------------------------------------------------CTGGAGC 1681
|||||||
Sbjct 1808 CTTGCTCTTTGATGACTCCTGCCTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAGCTGGAGC 1881
Query 1682 AGTTCAGCATGGAGAGCCCATCAGCCAGCCTGGTGCTGGATCCCCCTGGCTTTTCTGAAGGGCCTGGATTTTTA 1755
|.||||.||||||||||||||||.||||||||||||||||||||||||.||||||||||||.||||||||||||
Sbjct 1882 AATTCAACATGGAGAGCCCATCAACCAGCCTGGTGCTGGATCCCCCTGCCTTTTCTGAAGGTCCTGGATTTTTA 1955
Query 1756 GGGGGTGAGGGGCCAATGGGTGGCCCCCAGGATCCCCACACCTTCAACCACCAGAACTTGACCCACTGTTCCCG 1829
|||.|||||||..|||||.|||||||||||||.||.|||..|.|||||||||||||||||||||||||||||||
Sbjct 1956 GGGAGTGAGGGATCAATGAGTGGCCCCCAGGACCCTCACGTCCTCAACCACCAGAACTTGACCCACTGTTCCCG 2029
Query 1830 CCATGGCTCAGGGCCTAACATCATCCTCACAGGGGACTCCTCTCCAGGTTTCTCTAAGGAGATTGCAGCAGCCC 1903
||||||||||||.|||||.|||||.||||||||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct 2030 CCATGGCTCAGGACCTAATATCATACTCACAGGAGACTCTTCCCCAGGTTTCTCTAAGGAGATTGCAGCAGCCC 2103
Query 1904 TGGCCGGAGTGCCTGGCTTTGAGGTGTCAGCAGCTGGATTGGAGCTAGGGCTTGGGCTAGAAGATGAGCTGCGC 1977
||||.|||||||||||||||||||||||||||.||||.||||||||.||.||.|||||||||||||||||||||
Sbjct 2104 TGGCTGGAGTGCCTGGCTTTGAGGTGTCAGCATCTGGGTTGGAGCTGGGCCTGGGGCTAGAAGATGAGCTGCGC 2177
Query 1978 ATGGAGCCACTGGGCCTGGAAGGGCTAAACATGCTGAGTGACCCCTGTGCCCTGCTGCCTGATCCTGCTGTGGA 2051
|||||||||||||||||||||||.||||..||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 2178 ATGGAGCCACTGGGCCTGGAAGGACTAACTATGCTGAGTGACCCCTGTGCCCTGCTGCCTGACCCTGCTGTGGA 2251
Query 2052 GGAGTCATTCCGCAGTGACCGGCTCCAA---------------------------------------------- 2079
|||.||||||||.|||||.|||||.||.
Sbjct 2252 GGACTCATTCCGTAGTGATCGGCTACAGTGAGGGGACCTCACTGCCATCCTTCTTCATGGCCCTGTCCCATCAG 2325
Query 2080 -------------------------------------------------------------------------- 2079
Sbjct 2326 TCTTCATCCCTTCCCCCTGGCCAGTAGAGACTACTCTCTGCCCCCAGATCCTTTTTCTAATATGAATGAAGGAT 2399
Query 2080 -------------------------------------------------------------------------- 2079
Sbjct 2400 CCTAAAACTGAGGAAAGGGAAGGGGCTTGGCCAGGTGGCCCCTGAATGCTGTATGTCTGGTGGGCTTGGGGGAA 2473
Query 2080 -------------------------------------------------------------------------- 2079
Sbjct 2474 TTCAAGGGAGGGCCTAAAAGCACTTGTAACTTTGAAAACCGTCTGTCTGGAGGTCAGAGCCTGTTGGGAAGCAA 2547
Query 2080 -------------------------------------------------------------------------- 2079
Sbjct 2548 GGTGTAGAGGGAAATCTTGGAGAGAGGGCTTGTCCAGAAGGGATGGGCACTACCAGCCCCTCCCTATTTCTCTT 2621
Query 2080 -------------------------------------------------------------------------- 2079
Sbjct 2622 CCCCTTGCAATGGAAGAGAGAGCCAGAATGGATATTATTTTTTATTAAATATATTATATGTTAATAAAAAATCC 2695
Query 2080 ------------ 2079
Sbjct 2696 TATTAAACCTTT 2707
