Nucleotide Global Alignment
Description
- Query:
- TRCN0000478202
- Subject:
- NR_045673.1
- Aligned Length:
- 5404
- Identities:
- 207
- Gaps:
- 5197
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAAAGTCATTGCCCTCCATGAACTAACAATCTACAGGGAGCTGTAAAACAAGTACATGTGCAATTCCCGGCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTTTGAATCCCAGCACTTCTAGCTGCACAACTTTACCCAAGAGGCTTATTCTTTCTGAGCCTCTGGCTCTGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTAAAATGGACTTTACATTCAGTTTCTTTATCTGGCAATAAGCTGCCTGTGGAAAGAAAGGCTTCTTCTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAACAGATGAGTATTCTGCAGTGTGTGGGGAGCTGGCAGTGTGATGAAGGGGACAGGATTCTAGATGAGCTACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCACTCTGAAGACCCTATGACTGTATCCACTGGCAAGAAGTTTGAATAAAGGCCCTTTTACTCTTTCATGCCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCCCTCTACCAGAGGAGATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACGCCAACACTTGTGGGGAAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGATGAGCTGACCCTGGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCAATCTGTTGCCCAAGCTCCATGTGGTCAAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGATTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCCAAGAAATACCGCAACTATGATATCCCGGCTGAGATGACAGGCCTGTGGCGGTACCTCAAGAACGCCTATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCGTGATGAGTTCACCAACACCTGTGCAGCTGACAGTGAGATCGAGTTGGCCTACGCTGATGTCGCCAAACGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTCAGCCGATCCTGAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCATCTTGCTGGTATCAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAACTCCAGCCTGCTATCTTTCATGAAGGTCAGCACCATCCCTGGCCTCCTCACATAGGAATCTAGCAGAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGCCCACATATGGGATTGCCACTAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGATGCTTTAGAAACATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAACACCAACTCCTTTTCTACCCTCCTCTCCGTCCATACCTACAAGGCCAAGGACAAACGCCATCTTCATCCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTAGAAAGAGATCTATTACCCCATTAGGGGAGACAGAGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGGGTGTCTGGCAAACACAGCTTCAGTCTCACTACTTCTGACACTCTGGTTATTGGGCACTAAGGGCCAGACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAAAGTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGCTGCTGCTGCGCACCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGCATGCAATTCTAAACTGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGACTGGGATGGGAGGGGAGGGGAGCAGTGTTGATGCCAAAATACCCACGGGGTCTACCAGCCATGGGGTTTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGCTTAGGAGTAGTTGTTTCAGAGGTGATTACAGGCCTGGGTTTGACTGTGCTTACCAATGAGTGGTTTTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGCTATGAGAAAGTGGATGGGAGTGGGAGGAGGAGAGATGGGTGAAGACAAAAGAGTTCTTTATGAGCCTCGAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTCCCTGGTAAACTTTTAAAAAGGCCTTCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCTTACAGTAAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATGCAGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGGGTAAAAGCCACATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TAGGAGGTGGTCTGATCATAGAACACCTTAGGAAGAAAGTCCATGAGACTTTCTGACTAGGAAACCATGTGGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGAACTTGAAGAAAAATGTAGACCCATCTGGGTTAATTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAAGGAAAAATTTTTAAGCTAATATTTCACTCTTTTGTCATTCTCCTTAAGTTTCATCTCCTAAAAAGCTTACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGCCTGAGCTTGGGGACCTGTGCAGAGGAAACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAGGCTCCCAAGTGCTGGAAAGCCCCTGGACTTGGCTCATTTCTCAGCAAGGGCAGGATAGCACGGGTCCTTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCATAGAAATATCAACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGGATCTCTGAAGAAAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAGTAACCCATTGATCAAATCAGAGGAGAGGAAGCAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAACTTTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAGTAGGACACTTTATAAGCCTGAGAAAGCTTTGAAAAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AACCTTTCCAGGTCCCCCTGGAAATTGTGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGGAAAGAGTCCTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTTACTGTAGGGAAAAGCCCCAAACTGGCCTCCTGGGGGATGAGGGCTGAAATGATCCCGAAGGCCTTTTAAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTACTTCCCTGAGACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCAGAATTCAGCAACTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAATCAATATTGCTGTTTCTAGATGTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCTTCTGTGGTTGAGCTAGTTTTACAGAGATAAATATATTAAGACAAGGAGGTGGGGGTGTTATATGATCAATG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATAGCCATTTGAAAGAGAGGGAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAATTCAGAAATTTCTTTATA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTCAGCACTGGATTATCATATAATGCAAGTGACTATGGACTAAGAGTTAGTTATGGTGTCTTATGACTAGATT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TATTATGGTATATTAAAGTAACAATAATATTAATATTACCTTCCTTTTTTTTTTTGTTTCAAAAGAGATCTTTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCCTTAGGTGTCCCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAACTATACAGCTAT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGGGATGTATTTGTGTTGAGATCTTATTTTATTTTGTATTTATTTATCTTCTTTGACTTGCACAGCACTATTGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGGTGGGGGAAGCAGGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTAAGATTTTAATAACTGTAA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AAAGTAAGCTGGATAAGTAAAATCATGATGGATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAAAGTCAAA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TGCTTGATAAATTCAGAGTCACAGATGTGAGCATAGCTATATTCTTTTAAACGAGAGGTAGAGTGACCTAGCAC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TAAGCAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTAT 3996
Query 1 --------ATGGCCCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAA 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 CTTGGGAAATGGCCCTGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAA 4070
Query 67 AAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTT 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 AAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTT 4144
Query 141 CACAGTTCTGTGCCCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGA------- 207
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 CACAGTTCTGTGCCCCATGGCCACTCCACAGACAGACAATACCAAGCATCTTAGAACTGTCATAAGATAGGTCA 4218
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4219 TGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAG 4292
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4293 GCAGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAGAGTGTGTGTCTAAAATTAAA 4366
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4367 TTAAACTAGAAGCAGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCC 4440
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4441 ATCTCAACTGCACGGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATGTTAACTCATGGTTAAA 4514
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4515 ACTAAGTACAATGATTCCCAAGGGATCACTTTCTTATTTTTTTAAATGACATTAAGGAGAATCTTAAGAAAGCA 4588
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4589 TCAGAGAAAGACATGTGCATGTGAAGCACCCTGATTCTGATGTTAGGAAAACTTAAGCGAACAGGACCTGCTGC 4662
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4663 ACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATCATTCAAATCAAGCAACATGTGCCCTCCTCATCAACAC 4736
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4737 ACATTCTTCCCCTTTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAATTATGTATGAT 4810
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4811 CCAAAGTGTGCATAATTTCATTTAACGTTAAAGAAATAGATCCAATTCCTTTCTTGCAACCAAAAATAAATAAA 4884
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4885 ATACGTTGCCTCAATATAAGGTTTGGGCTATTCTGTGTTTCTATAGAAGCAATCTGTTTTTGGTAAAATGTACT 4958
Query 208 -------------------------------------------------------------------------- 207
Sbjct 4959 TTTAAGGATCCAGTCATCTGAAGTATTTTATGTAGAGTTAGAGATTTCACAATATTGACTATACATATATTTAA 5032
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5033 AATATAAATTATCCAGCTGATGTTTGAATTTGTCTTACTTTCCTGGCCACCTCGTTGTCCTATTTTATAAGCTG 5106
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5107 GGGAGTTAACTAGCTTAACAAAAGATGCTTAGCTTTTGTAAAAGAACAAGTGTTTCATTTTACAAAGACACTCC 5180
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5181 AAATGATAGTTACTTGATTTTCTCGAGACCTTTAACTATGGTGATGAATAACAGGACTTGCTTTCAAGCCTTAA 5254
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5255 TAAATGTAAAATGCCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGT 5328
Query 208 -------------------------------------------------------------------------- 207
Sbjct 5329 GTTCCAGTCTTGATTGGTATTGACTGATTCAAATAAAGTTGGTTTATTTTCAAATATTACAAAAAAAAAAAAAA 5402
Query 208 -- 207
Sbjct 5403 AA 5404
