Nucleotide Global Alignment

Description

• Query: TRCN0000478244
• Subject: XM_006521566.3
• Aligned Length: 1487
• Identities: 939
• Gaps: 448

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGG------------------------------------------------------GGGAT  400
            |||||||||||||||                                                      |||||
Sbjct  588  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGAT  661

Query  401  TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAG  474
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  662  TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAG  735

Query  475  GGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAA  548
            ||||||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.|||||||||||
Sbjct  736  GGCCGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAA  809

Query  549  TGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAG  622
            |||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct  810  TGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTG  883

Query  623  ATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATC  696
            |||||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.|||||
Sbjct  884  ATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATC  957

Query  697  ATTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGG  770
            ||||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.|||||||||||||
Sbjct  958  ATTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGG  1031

Query  771  GCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGG  844
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032  GCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGG  1105

Query  845  ACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA-----------------  887
            ||||||||||||||||||||||||||   |.||  ||.|||         ||..|||                 
Sbjct 1106  ACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTC  1179

Query  888  -------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA-----------GCC  921
                         |.||||| .|||| .|  |.||||||              ||   ||           |||
Sbjct 1180  TCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCC  1248

Query  922  ACCGCTGCTGCAGCCGCTGTAGCCGC-----TTAC------------------AGTGAC----GGTTATGGCAG  968
            |..|||       |.|.||    .||     ||||                  ||.|||    .||||.||.|.
Sbjct 1249  AGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTAT  1311

Query  969  GG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGT  1022
            ||  |||  ||.||   |..|||         ||   .|||||.|.|.|||...|||| ||||  ||| |.|.|
Sbjct 1312  GGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAAT  1382

Query 1023  TGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGCCCCCTAC-----  1074
            ||..||||||       ||   .||||||   |||| ||.||           |||.|.|   |||.|.     
Sbjct 1383  TGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAAT  1445

Query 1075  -------  1074
                   
Sbjct 1446  GCTGGGA  1452