Nucleotide Global Alignment
Description
- Query:
- TRCN0000478246
- Subject:
- XR_001750613.2
- Aligned Length:
- 5993
- Identities:
- 1416
- Gaps:
- 4577
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGAGTTGGGGCAGCTCCTCGCGCTCGGCCCTGCTCGGCGGCGAGAGCTCCGCCTGGGCGCCGCGTTCCTACAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCCGGAGCCGCCAGGCGCCGAGGGAACGGACAGACCTCCGCGCACCCTTGCCGACCGGGGCGGGCAGAGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCAAGCGGCGAACGCCTGGGAGCGCGGAGAGCCAGGCCAGCCCGGAGCGCGCCGGGGACACCCTGTGCGCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGTCCCGGCACCATGCGACCCGCCGCGCGTCCTCGCGGGCCCGGGGCTTCGCTCTTCGCTCGCTGAGCCCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCTCGCCACCACGGAAACTCGGAAAGAGGAGGCGAGGCTGTGGGGAGCGGCGCGGAGACGGACTAGACTTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCGCCCCCAAGAGGCTGCCGGTCCCCGGTTCCCTGGGCTTCTCCAGCTTTATCATGAACCTGGCGCAAGGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCTTTAGGAAAAATTCTGGAGCCAGAGGGAGAGTCAAGGCAATTCTTTGGTTGCTAAGTGTGAGTGAAGACAC 518
Query 1 -----ATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCAAACATG 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGGATGGCTCAAGGATCCGGGGATCAAAGAGCAGTGGGGGTTGCTGACCCAGAGGAGAGTTCTCCAAACATG 592
Query 70 ATCGTTTACTGCAAAATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAAC 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCGTTTACTGCAAAATTGAAGACATCATTACAAAGATGCAAGATGACAAGACAGGGGGTGTGCCCATCAGAAC 666
Query 144 AGTCAAGAGCTTTCTCTCCAAAATCCCCAGTGTCGTCACAGGTACTGACATTGTGCAGTGGCTTATGAAGAACC 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTCAAGAGCTTTCTCTCCAAAATCCCCAGTGTCGTCACAGGTACTGACATTGTGCAGTGGCTTATGAAGAACC 740
Query 218 TTTCCATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGCCTTATCGCTGCCCAGGGCTACATCTTTCCAATC 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTCCATTGAGGACCCAGTTGAAGCAATACACTTGGGGAGCCTTATCGCTGCCCAGGGCTACATCTTTCCAATC 814
Query 292 TCAGACCATGTTCTCACCATGAAGGATGATGGCACCTTTTATCGTTTCCAGGCTCCGTACTTCTGGCCTTCGAA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCAGACCATGTTCTCACCATGAAGGATGATGGCACCTTTTATCGTTTCCAGGCTCCGTACTTCTGGCCTTCGAA 888
Query 366 CTGCTGGGAACCTGAAAACACTGACTATGCCATCTATCTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTGG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCTGGGAACCTGAAAACACTGACTATGCCATCTATCTCTGTAAGAGGACAATGCAAAATAAAGCAAGGCTGG 962
Query 440 AACTGGCAGATTATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAGGAAGTGGGAATTCATCTTT 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AACTGGCAGATTATGAAGCAGAAAACTTAGCAAGACTCCAGAGGGCCTTTGCGAGGAAGTGGGAATTCATCTTT 1036
Query 514 ATGCAAGCAGAAGCACAAGTAAAGATTGACCGGAAAAAAGACAAGACAGAAAGGAAAATTTTGGATAGTCAAGA 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGCAAGCAGAAGCACAAGTAAAGATTGACCGGAAAAAAGACAAGACAGAAAGGAAAATTTTGGATAGTCAAGA 1110
Query 588 ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACAACAGAAATGGATATCCGAAAATGTC 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACGAGCCTTTTGGGATGTCCACAGGCCTGTGCCAGGCTGTGTGAACACAACAGAAATGGATATCCGAAAATGTC 1184
Query 662 GACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCCGTGTATGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCG 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GACGTTTGAAGAATCCACAAAAGGTTAAAAAGTCCGTGTATGGCGTGACTGAAGAGTCCCAGGCACAGAGCCCG 1258
Query 736 GTGCATGTACTCAGCCAACCAATCAGGAAAACAACAAAAGAGGACATCCGGAAACAGATAACATTTTTGAACGC 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGCATGTACTCAGCCAACCAATCAGGAAAACAACAAAAGAGGACATCCGGAAACAGATAACATTTTTGAACGC 1332
Query 810 ACAGATCGACAGACATTGTTTGAAAATGTCCAAAGTGGCTGAAAGTTTAATTGCCTACACGGAACAATATGTGG 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACAGATCGACAGACATTGTTTGAAAATGTCCAAAGTGGCTGAAAGTTTAATTGCCTACACGGAACAATATGTGG 1406
Query 884 AATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATA 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AATATGACCCTTTGATAACACCAGCTGAGCCATCCAACCCTTGGATCAGCGATGACGTTGCTTTGTGGGACATA 1480
Query 958 GAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGATGGGGCTTCTCTTTCGATGAGATATTGAAGGACCA 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GAGATGAGCAAAGAGCCCAGCCAACAGCGAGTAAAAAGATGGGGCTTCTCTTTCGATGAGATATTGAAGGACCA 1554
Query 1032 GGTGGGGCGGGACCAGTTTCTACGATTCCTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTCTGGCTGGCTG 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGTGGGGCGGGACCAGTTTCTACGATTCCTGGAGTCCGAATTCAGTTCAGAAAACCTCAGGTTCTGGCTGGCTG 1628
Query 1106 TCCAAGATCTTAAGAAACAACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCT 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCCAAGATCTTAAGAAACAACCCCTACAGGATGTGGCCAAGAGGGTAGAAGAAATCTGGCAAGAGTTTCTGGCT 1702
Query 1180 CCAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACAGCTATGAGATAACCAGTCAAAATGTCAAAGATGGAGG 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CCAGGGGCTCCAAGTGCAATCAACCTGGATTCTCACAGCTATGAGATAACCAGTCAAAATGTCAAAGATGGAGG 1776
Query 1254 GAGATATACATTTGAAGACGCCCAGGAGCACATCTACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCC 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAGATATACATTTGAAGACGCCCAGGAGCACATCTACAAGCTGATGAAGAGTGACAGCTATGCCCGCTTCCTCC 1850
Query 1328 GGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAA---------------------------------- 1367
||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGTCAAATGCTTACCAGGATTTGCTGCTGGCCAAGAAGAAGAAAGTGAGCAAGGTCGTAGAACTTCCCTAGAAA 1924
Query 1368 -------------------------------------------------------------------------- 1367
Sbjct 1925 AGTTCACTCGCAGTGTGTGCTGCTGGCGCAGAGTCAGAATGGCCGCTGCATTTCACCCCCGAGGTGGCTTCCTT 1998
Query 1368 ---------GGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCC---------------- 1416
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCAGCAGTGGGGAAAGTCGCTGGCGGGCAAGCGCCTCACGGGCCTGATGCAGTCCTCCTGACCGTTCCTACCGC 2072
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2073 AGGTCCAGGGCCTGGGCCCGCGGACCCCACAGGCAGGCGGCGGCGCTCCACATCTGCGGACAGAGTTTCCTTAC 2146
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2147 GAGGAGACTTGGTCACTGTGAAGGAGAAAGATTGTATTCCAACACTCCACTCGCTAAGAGGCCCTGATCCCAGC 2220
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2221 TCATTCAGGGGAGAACACGTCGTGGGGTTCCTGTCACGACTATCACTTGAGATTATATTATTATCCTCACTCCC 2294
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2295 TCGCTGTCTGGAGACGGTCACACCTTCTGGCAAATTCAAGAGGCATGAGTGGACCGAGAGCACATCCAGCATTT 2368
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2369 GCATCACCTCCCTGGCACCTCCCATAGTTACAGCCACTACATCCCCACCGCCGCCTGTCATCCCTCACGTCTCT 2442
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2443 GTGGCCACCCGGGTGTCACTGCCAGCACCAGGCACTGCTTTCACGTAAAATGTCCAAATCACATCTTCAGCAAG 2516
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2517 AAAGCAACCTCACGGATTGCCCCGCCTCAAGGTCTTTCCACCCTCTTTGAGATCAGCGTTCGGAGAGGTCCCCG 2590
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2591 CCAGCCCGGTGGCTGCCCTCAGGTCCCGTCACATGTCTCAAGGGTCCAGCGTTCGAGGAAGCACTGTTGTAGAT 2664
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2665 GACAGAGCTTTTTGTTTCACAGCTGCGGGGATTCTGCTGACCATCTTTTAGAAAATTATTTCATAATTTATTCT 2738
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2739 GGCTTTGCCCCCTTGCTCCTTGGTTTATTCCCTCATGTTTTACTCAAAATAAACATGGCCATGAACTCAGGGGC 2812
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2813 CATTGGGATTCTCCCCTCTGGCAGCCCCAGGTGGGAGCTGGGAGGGTCCCCAGCCCAGGAGGTGGCTGGATTGC 2886
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2887 AGGGCTGGCAGCCCCCACGTGGTGGCATCCTGACAGGCACAGTGAGACCCTTGCTGGGTCAGGTCTCCTTTGTG 2960
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2961 TGTGAAGCTGGGGCAGAGTATGCTACGAAGGGACCAGGCCAGGCCACAGGGCTCTCCTCCCAGTCTTTATCTGA 3034
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3035 AGGCCCAGCCAAAGCACCCCTCTAAACCGGTCACCTAGGGGAAATGCAAAAACCTGCAAAAGATCCACCTGTAT 3108
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3109 TCCCTGTGTGTGTGTGTCAAAATGACCATTTGCCAACCTGGCTGTGAGGTAATGTATGTAAAGCACCGAGTCAG 3182
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3183 GTGCCTGATACGCAGTAGGTGCTTAGCAAACGGTAGCTAATACTATCATCATTGTCATTGTTATTGTGACACCC 3256
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3257 ATGAGCCCACAGACAGAGCTGTATTAAGTAACCTGTTTTGAATCCAGACATTCACTCCCCCACTTGCTATGACT 3330
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3331 ACCCTCCTTTGATCTATTTTTGGTCATAGGTAAAAAAAAAAATCTCTCTTGGGAGCATATAAACAAAAAACATA 3404
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3405 GAAGCAATAAAGCGATCGCTGGTATTTCTTTTCTCATGCAGCCAAATTCGCCAGCTGGTGACCAAAGGCTCAGA 3478
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3479 TGCTTGCTTATTTGCAGACCCGGCCTCCTGGGTGCTCCCCAGTGACCCATCTTTCCACCCCACCACCTCCAAGT 3552
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3553 CCTGTCTATGTCTGCTTCCACACAGCCCTGTCCCCAGGGCACCAGCCTTCTGTCCCTCACAGCAGTGCCATCGC 3626
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3627 GGGCATTAGGAGTCTTCGTTATGTTGTATCCTTGTGAGTTCTTGACTACCATGCCCAAGTTTCCCCCACTGGCA 3700
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3701 ATGGTTCCTCTCTTGGAGGTACAGTGGAAACCAGAGAGATGACAGATGTTGAGTCCTCAGTGTCTCAGAGGCAG 3774
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3775 CAATTCTTGCTGGACACCTGCACATGCTCAGCACAGAGGCTGGTACTTTGGAGGCACTAACCACTTGATGAGTA 3848
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3849 AATCAATGGCATAAAGCCCCATTCCAAGTTATGGGGTCTTTTGACAGGCCCCTTTCATCCTCTTTCTCTTTGTA 3922
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3923 TAAACCTCATGTTTCAGAACAAAATTACAGTCTAAGTTCATTTGCCCCCAGCCTTGCCCAAGGATCCCCGGGCT 3996
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3997 GTGCTGACCCCTAGGCATAGGGCAAAGGGTGTTCCCAAGCAGCAGGCACCTCAGTGCCCTCAGTTATCCAGGGC 4070
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4071 AAGGGGCCTGGCTGCCCCCTGCTCCTCCCCATGATGCAGGGGCTTTCTAAGCCAGGCTGCAGACAGGGCAGGGT 4144
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4145 TGGCTTCTTGGCCATTCCCTCTGTGCCCCCTTCTCCTTCTGACTGGTCTCACCCTGGAGATCCCCAGAGGATCT 4218
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4219 GACCAGAGCCAGGTGGACTGTGGCCCTGAGATGGAGCTGGCTGCAGGCTTACAAGCACCTCTGGGGACATCCAG 4292
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4293 AGGGGAGGGTCAGTAAGCACAACGGAGCTAGGGAGACTTCAGATGGACTCAAACCCAGAGCAATAATACTCTCA 4366
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4367 CACCACCCCACAGCTAAGGCACTCATGTTCCCCAGTAGATCAAGCCAGAAGCTTTGCAAGAAGGGAGTGGAACG 4440
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4441 AGGCTGCCTATCCAAGGTCCATCTACCACGCAGAACTTGGTCATGCAAGTACATTTGGAAAATCTGGTCTTGGC 4514
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4515 CCGTCCCCCATTGGCCTGGTCTACACAGCCAAAAATTCAGACTAGATTAGATGTTTGCAGGCAATTCTGTAGCA 4588
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4589 AAGCAAATTCCCCTACCCCGTCCCTTCCCCCTAGAAGCTGCCTTAGCCTCCCTGACTGGGTGTGGTCTCTGGGC 4662
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4663 CTAGGACTCCTCCCTATGAGGAAAAGTGCTCTCCAGCCACATCTTGGCAGCCCCACAACCACAGCATCAGGGCA 4736
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4737 GCTGCAGCAAGTGACCACCCACCCGTCGGGTTAGACACACAAGGCACCAGGCACTGGCATCTGACTAAAATAAC 4810
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4811 CTTTCCCTACATGGGAAGAGGAAAGCTTGTAGGCTGGCACATATAAACGTCCAGCCGCAGCCAGATGGCCTGAA 4884
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4885 CTAAGCAGCAGGAACTCTCTGGGCTGGGGAGGAGCCTCCTGCCCTTCTAGAAAGTGATGCGTCAGCTTTGTTCT 4958
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 4959 CCTGGGAAGGTGTTGCTATACCCCAGGAACAAAGCAGGGCCCAACTGCCAGTGCAGTCAGCTGGGCCTGCGCTC 5032
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5033 CAGGCTCACCACCGCTAAGTGGTCAGGTACCGGGCCAGCATCCTGGGAGGGACCTCTTGCGACTCTGAGTTGCA 5106
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5107 GCTTGGACTAGCTGAACACATGGGGACATGCTCCAGGGGCTTCTTCCCTGGCAGGATTCCTGGGATTTCAAACT 5180
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5181 ACCTCACCAACAGGACGCTGAACCAGGAGCCTGCCACCCAACTGGCCCCCTTGGTGATTGTGGAAGGTGATGTT 5254
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5255 TTTCCTAAAATGCATCCCTCCTGTTCTGCTCCATATACATGTGCTTCAAAAACCACCACCAGGAAAGCCTTCCC 5328
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5329 AGAAGAGGGAAAGGATTAAGGGCTCTCTTCCTTTGGGCCCTGCAGAATGTATTGGAGGGAGGTGTTGCTGCAAG 5402
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5403 GTCCAGGAGCTGGGAAACTCTGGGCTCGGGGGGAGATAATGCACCACCAGCCTCAAAAAGGAGCTGCCCAAGTT 5476
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5477 GAATATGTAGCAAAGACCATGGGATAAGTTGAATAGTGGCCAGACGAATCACTAATAACTCACCATGGGACCCT 5550
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5551 CTGAAGAGAGGCCTGTGCTCGTGTAACCATAGCAACAGCAGATGCCAGCAACCTACTCATTAGTACCACCCAGT 5624
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5625 GATAAGGCATCCCCTGGGCTAGACCCAGGGGCCATAAAGTAGCAAAGTAGCAAATGTAGCAATAAAGGGCCCGG 5698
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5699 GTCTATACGGGGACAGGGTCCAAATGACCAGGACTTGGCCCTCTCCCCAGCCCCGATGAGGGCTCAGAGCCAGC 5772
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5773 TGCTGTCAGCTGTCTGGGGAGGGAAGGCCCTGCTCCATACCAGGGGTCCCTGTTCTATACTCTAAGCCCACTCA 5846
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 5847 CCGCATGATCACGGACTCATCGGAATGGCCTCCTCTTAGTGCATGTGGTTCTCTTTAGTTTATTTTTCTGGAAT 5920
Query 1417 ------------------------------------------------------------------------- 1416
Sbjct 5921 TTGGGGATTGGACCCCAGAACCAAACATGCTGGTACAGTCTAAAAATAAATGACTTGAACCCACTTCAATCCA 5993
