Nucleotide Global Alignment
Description
- Query:
- TRCN0000478282
- Subject:
- XR_001736986.1
- Aligned Length:
- 3744
- Identities:
- 188
- Gaps:
- 3529
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCAGAGCTCGGGGGCGGCGCTCAGAAAACATCTGGAGAAAATGACCCATTGGTTTCATAGGAACCCATTAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCACAGCTCCTGTGTCTTTTAATTACTATGGTGTAGTCACTGGCCCTTCTGCTTCAAAAATATGCAATGACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGGTCATCCAGGGCACGACTCCTTGAACTGTTCACTGATTTGAGCTGTAATCCAGAAATGATGAAGAATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAGATTCATATTTCTCACTTTTACAAGGTTTCATAAATTCTTTGGATGAATCTACCCAAGAAAGCAAGTTACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATATATTCAAAATTTCAAGTGGACTGATACATTGCAAGGACAGGTTCCAAGTGCCCAGCAGGATGCTGTTTTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTAATTTCCATGGGATTTAATGTAGCTTTATGGTATACCAAATATGCTTCAAGACTGGCTGGAAAAGAAAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATAACAGAAGATGAAGCAAAAGAAGTTCATCGAAGCCTAAAGATTGCAGCTGGGATTTTTAAACATTTAAAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTCATCTCCCAAAACTCATTACACCTGCGGAAAAAGGAAGAGATTTAGAGTCACGACTCATAGAAGCATACG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTATTCAATGTCAGGCTGAAGCTCAAGAAGTAACAATTGCTCGAGCAATTGAACTAAAACATGCTCCTGGACTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGCTGCACTGGCGTATGAAACAGCCAATTTCTATCAAAAAGCTGTTTGGAGCCTGCATATTCTGCCAAATGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAAATATCTTCACTTGAAGATGTGTTTCTACACAGCTTATGCTTACTGTTACCATGGTGAGACTTTATTGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGTGATAAATGCGGTGAAGCAATCAGGTCTCTCCAAGAAGCAGAAAAATTGTATGCAAAGGCAGAAGCACTGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAAAGAATATGGAGAAACCAAAGGACCTGGACCAACAGTCAAACCTTCAGGACATCTGTTCTTTAGGAAACTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAACCTTGTGAAGAACACCCTAGAAAAATGTCAGAGAGAAAATGGATTTATTTACTTTCAAAAAATTCCAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAAGCCCCACAGCTGGAACTCAAAGCAAATTATGGTCTCGTAGAGCCTATACCTTTCGAATTTCCTCCTACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGTTCAGTGGACACCAGAAACATTGGCTGCATTTGATCTCACCAAAAGACCCAAGGATGACAGTACTAAACCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAACCAGAAGAAGAAGTGAAACCTGTGAAAGAACCAGACATCAAACCTCAAAAGGACACTGGGTGCTACATCTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAAAATACAACTTGCACTTAGAATTTCTCTAGCAGTAAATAAGATAAACCACAGAATTTCAGTTCTTATTTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAAAATGATTTCTCTGAAGCTTGTAGAATAACTATTATATTCAGAGGGTTATCTGCCTTCAGCTTACTTGTTCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAATTTTTAATACAGCGGAGATGTTTCTTGCTTTGTTTTCAGACTCTCCTTTTTAATCAGGACAACATTTGAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GATTTTATTGTGCCTCTAAAGGGTATATTTGGGGGTTGGGTCTTTTTGTTAAACTCTGGATAGTAATAAGTTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGGTCAGTATAGGCCCGAATCATGTGGTTTCAGGTATGTTTTTCTTTTTTCTTTTTCTTTTTTTTTTTTCTTTT 1628
Query 1 --------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCA 54
.|||||||||..|||||.||||||.||||||||.||||||||||||||||||||
Sbjct 1629 TTTTTTTTTTTTTTTTTGAGGTGGAGTCTCCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCA 1702
Query 55 CTGCAA-CCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACA 127
|||||| ||||..||||..||..|.|||.||||||||||||||.||||||.||||||||||||||||||||||.
Sbjct 1703 CTGCAACCCTCCACCTCCTGAATTAAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACG 1776
Query 128 CGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCT 201
|.|.||.|..|||.|.||| |||||||||||||||||||||.|.|.||||||||||||||||||||||||||
Sbjct 1777 CACCACTACACCCAGATAA---TTTTTGTATTTTTAGTAGAGACGTGATTTCACCATGTTGGCCAGGCTGGTCT 1847
Query 202 CGAACTCCTGACCTCAAG-------------------------------------------------------- 219
||||||||||||||| ||
Sbjct 1848 CGAACTCCTGACCTC-AGCTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGATCCACTGC 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 ACCTGGCCTCAGGTATGTTTTTCTATCTACACACAAAAAGTTTATTTTCCTTCCTCTTATTTGATATCAGAAGA 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 ATGACAGGAATCAGTTTTTAACAGAGATAGTTTTTCCGTTTCTCCATTGTGTTAATCAGAGCGCAGACTTACAT 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 TCTCAGTCATTTATCTTTTCTGGTGGAGAATAAAAAGTCACTTATAGTTAAAGATCAGAAAATTATCACACCAA 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 ATCCATTACATATGTTAGAATCAATAATTTACTCAAAAATCAGCTTTTATAGGTATGTTGGCACCTTATCCAAG 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 AACTTATCCCTGTTCCAGTACCCCTGTGCTTCATTCAGTATCAGTAACCCTGCAATGATTTTTACAAATATCTT 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 TTTCTAGTGGGTTTTTTACTTAGAGGAAAGAACTTTGTAATAGCTCTTAATGTTTATATATAAGAGAAGACAGA 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 ATGGAAAATGTTTTTTGAAGTCAAATATTGCATGATGTAAAGAAAAAACTTTAAACTTAAATGAGTAGGTTGTC 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 CTGAATTACACTGGTAACTCTCTACTTCTTTATTAAAGAAGTTATAGTAAGATGCCTTTGTTACCTGATTTCAG 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 TGTACATTGTTTTTATGTGGTTTTCTGATAATGTCCTGTCAGAATTGTATTGGTTTAGGCCAAAGGCCATAGCA 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 AAAACATAGAGAACAAATATGATCTTAAAAATAGATTGTAACATTTTAAACAATTAGTTTAGTAATTTGGGAAA 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TAGTGGATGCATAATACTTTAACAGAAGTCACACATCTGTAGGTTTATCTTTTGATTATTCTCCTGAGGCATTA 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 GATAGTTTTTCTATTATAAGTGACAGATTGACTCACTTAATATAAATAAGTAGCATACACTAAAAGCTTACTAT 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 GTGCCAGATACTGTGCTGGACACTTACATAGATAAGCCATTGAATCCACACAGCAGCCCTGTAAGAAATAAGTA 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 AAATCTGCATAAAGTGTTGAAATAGGAATATACATTTCATTATGAAAAATGAATAGATTATGCCTATCTGAATC 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 AATATTGCATTCAAATAAGTGATTACTTAAATCATATATCATAGTTTACACTCCTTAAAAAAAGGTACATAAAT 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 TCAGTGAGGTTTTTTTCTTAACATACAGAAGTACTAAATACTGCTTGCAGTATAATATTGATATTGGAAGCTGC 3104
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3105 AGTTTCCAGAATAAGTGGAGTAATAACTAAACAGACATTTAATTTTATTTCAATATCTATGGAAAAAACACTTA 3178
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3179 TTAAATCTCCCTGTATTTTATGTTGTCTTTATTACAGAATCACTTGTCTGTTTGTTGTGTGCCACTTACTGACA 3252
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3253 AAACTTTAAACAGTACTTGATGCCAGCTCTCTACTCTGTGGCTGTGGGACCTGTTTCTTTTAGGTACTTGTGCT 3326
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3327 TATTAATCTACTTACTAAATTTTCACATTGACATTTTTGGGGATGATACTACCATATACGAAATGGAAAATGTA 3400
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3401 ATATGCTCAGTGCTTCTGTAAAATGCAGCAATACTGGTATTACTTTACATCAGTAGGCATCTTTGACATGAGCA 3474
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3475 TATAAATATTTTGTTGACTCAGCAAAGGTGACACTTTGTGACTAAAGTATCCCATTATATATAATGTTTTTTGA 3548
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3549 AATGTTGGAAATTTTGGGGAATTATCAAATGTATAGAAGTTGCATGAAGGTTATAGAGAGGTGTAACTGTTTGT 3622
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3623 TAACTATTACATGGATTTCATACTAGGCAGTGACAACTAACATGTTACTTCAACTAAAAGTGTATAATGGGTTG 3696
Query 220 -------------------------------------------- 219
Sbjct 3697 TCTTTTTATTTATGAAAATAAAAGTAATTTTACTTACAATTTCA 3740
