Nucleotide Global Alignment
Description
- Query:
- TRCN0000478305
- Subject:
- XM_011539006.3
- Aligned Length:
- 2583
- Identities:
- 1440
- Gaps:
- 1140
Alignment
Query 1 ATGACTGGGAGAGCCCGAGCCAGAGCCAGAGGAAGGGCCCGCGGTCAGGAGACAGCGCAGCTGGTGGGCTCCAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGCCAGTCAGCAACCTGGTTATATTCAGCCTAGGCCTCAGCCGCCACCAGCAGAGGGGGAATTATTTGGCCGTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GACGGCAGAGAGGAACAGCAGGAGGAACAGCCAAGTCACAAGGACTCCAGATATCTGCTGGATTTCAGGAGTTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCGTTAGCAGAGAGAGGAGGTCGTCGTAGAGATTTTCATGATCTTGGTGTGAATACAAGGCAGAACCTAGACCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGTTAAAGAATCAAAAACAGGTTCTTCAGGCATTATAGTAAGGTTAAGCACTAACCATTTCCGGCTGACATCCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GTCCCCAGTGGGCCTTATATCAGTATCACATTGACTATAACCCACTGATGGAAGCCAGAAGACTCCGTTCAGCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTTCTTTTTCAACACGAAGATCTAATTGGAAAGTGTCATGCTTTTGATGGAACGATATTATTTTTACCTAAAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTACAGCAAAAGGTTACTGAAGTTTTTAGTAAGACCCGGAATGGAGAGGATGTGAGGATAACGATCACTTTAA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CAAATGAACTTCCACCTACATCACCAACTTGTTTGCAGTTCTATAATATTATTTTCAGGAGGCTTTTGAAAATC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ATGAATTTGCAACAAATTGGACGAAATTATTATAACCCAAATGACCCAATTGATATTCCAAGTCACAGGTTGGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GATTTGGCCTGGCTTCACTACTTCCATCCTTCAGTATGAAAACAGCATCATGCTCTGCACTGACGTTAGCCATA 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 AAGTCCTTCGAAGTGAGACTGTTTTGGATTTCATGTTCAACTTTTATCATCAGACAGAAGAACATAAATTTCAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GAACAAGTTTCCAAAGAACTAATAGGTTTAGTTGTTCTTACCAAGTATAACAATAAGACATACAGAGTGGATGA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 TATTGACTGGGACCAGAATCCCAAGAGCACCTTTAAGAAAGCCGACGGCTCTGAAGTCAGCTTCTTAGAATACT 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ACAGGAAGCAATACAACCAAGAGATCACCGACTTGAAGCAGCCTGTCTTGGTCAGCCAGCCCAAGAGAAGGCGG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GGCCCTGGGGGGACACTGCCAGGGCCTGCCATGCTCATTCCTGAGCTCTGCTATCTTACAGGTCTAACTGATAA 1184
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------ATGCTCATTCCTGAGCTCTGCTATCTTACAGGTCTAACTGATAA 44
Query 1185 AATGCGTAATGATTTTAACGTGATGAAAGACTTAGCCGTTCATACAAGACTAACTCCAGAGCAAAGGCAGCGTG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 AATGCGTAATGATTTTAACGTGATGAAAGACTTAGCCGTTCATACAAGACTAACTCCAGAGCAAAGGCAGCGTG 118
Query 1259 AAGTGGGACGACTCATTGATTACATTCATAAAAACGATAATGTTCAAAGGGAGCTTCGAGACTGGGGTTTGAGC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 AAGTGGGACGACTCATTGATTACATTCATAAAAACGATAATGTTCAAAGGGAGCTTCGAGACTGGGGTTTGAGC 192
Query 1333 TTTGATTCCAACTTACTGTCCTTCTCAGGAAGAATTTTGCAAACAGAAAAGATTCACCAAGGTGGAAAAACATT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 TTTGATTCCAACTTACTGTCCTTCTCAGGAAGAATTTTGCAAACAGAAAAGATTCACCAAGGTGGAAAAACATT 266
Query 1407 TGATTACAATCCACAATTTGCAGATTGGTCCAAAGAAACAAGAGGTGCACCATTAATTAGTGTTAATCCACTAG 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 267 TGATTACAATCCACAATTTGCAGATTGGTCCAAAGAAACAAGAGGTGCACCATTAATTAGTGTTAAGCCACTAG 340
Query 1481 ATAACTGGCTGTTGATCTATACGCGAAGAAATTATGAAGCAGCCAATTCATTGATACAAAATCTATTTAAAGTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 ATAACTGGCTGTTGATCTATACGCGAAGAAATTATGAAGCAGCCAATTCATTGATACAAAATCTATTTAAAGTT 414
Query 1555 ACACCAGCCATGGGCATGCAAATGAAAAAAGCAATAATGATTGAAGTGGATGACAGAACTGAAGCCTACTTAAG 1628
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 ACACCAGCCATGGGCATGCAAATGAGAAAAGCAATAATGATTGAAGTGGATGACAGAACTGAAGCCTACTTAAG 488
Query 1629 AGTCTTACAGCAAAAGGTCACAGCAGACACCCAGATAGTTGTCTGTCTGTTGTCAAGTAATCGGAAGGACAAAT 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 AGTCTTACAGCAAAAGGTCACAGCAGACACCCAGATAGTTGTCTGTCTGTTGTCAAGTAATCGGAAGGACAAAT 562
Query 1703 ACGATGCTATTAAAAAATACCCGTGTACAGATTGCCCTACCCCAAGTCAGTGTGTGGTGGCCCGAACCTTAGGC 1776
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 ACGATGCTATTAAAAAATACCTGTGTACAGATTGCCCTACCCCAAGTCAGTGTGTGGTGGCCCGAACCTTAGGC 636
Query 1777 AAACAGCAAACTGTCATGGCCATTGCTACAAAGATTGCCCTACAGATGAACTGCAAGATGGGAGGAGAGCTCTG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 AAACAGCAAACTGTCATGGCCATTGCTACAAAGATTGCCCTACAGATGAACTGCAAGATGGGAGGAGAGCTCTG 710
Query 1851 GAGGGTGGACATCCCCCTGAAGCTCGTGATGATCGTTGGCATCGATTGTTACCATGACATGACAGCTGGGCGGA 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 GAGGGTGGACATCCCCCTGAAGCTCGTGATGATCGTTGGCATCGATTGTTACCATGACATGACAGCTGGGCGGA 784
Query 1925 GGTCAATCGCAGGATTTGTTGCCAGCATCAATGAAGGGATGACCCGCTGGTTCTCACGCTGCATATTTCAGGAT 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GGTCAATCGCAGGATTTGTTGCCAGCATCAATGAAGGGATGACCCGCTGGTTCTCACGCTGCATATTTCAGGAT 858
Query 1999 AGAGGACAGGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCAAGCGGCTCTGAGGGCTTGGAATAGCTGCAATGA 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 859 AGAGGACAGGAGCTGGTAGATGGGCTCAAAGTCTGCCTGCAAGCGGCTCTGAGGGCTTGGAATAGCTGCAATGA 932
Query 2073 GTACATGCCCAGCCGGATCATCGTGTACCGCGATGGCGTAGGAGACGGCCAGCTGAAAACACTGGTGAACTACG 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 933 GTACATGCCCAGCCGGATCATCGTGTACCGCGATGGCGTAGGAGACGGCCAGCTGAAAACACTGGTGAACTACG 1006
Query 2147 AAGTGCCACAGTTTTTGGATTGTCTAAAATCCATTGGTAGAGGTTACAACCCTAGACTAACGGTAATTGTGGTG 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007 AAGTGCCACAGTTTTTGGATTGTCTAAAATCCATTGGTAGAGGTTACAACCCTAGACTAACGGTAATTGTGGTG 1080
Query 2221 AAGAAAAGAGTGAACACCAGATTTTTTGCTCAGTCTGGAGGAAGACTTCAGAATCCACTTCCTGGAACAGTTAT 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AAGAAAAGAGTGAACACCAGATTTTTTGCTCAGTCTGGAGGAAGACTTCAGAATCCACTTCCTGGAACAGTTAT 1154
Query 2295 TGATGTAGAGGTTACCAGACCAGAATGGTATGACTTTTTTATCGTGAGCCAGGCTGTGAGAAGTGGTAGTGTTT 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 TGATGTAGAGGTTACCAGACCAGAATGGTATGACTTTTTTATCGTGAGCCAGGCTGTGAGAAGTGGTAGTGTTT 1228
Query 2369 CTCCCACACATTACAATGTCATCTATGACAACAGCGGCCTGAAGCCAGACCACATACAGCGCTTGACCTACAAG 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229 CTCCCACACATTACAATGTCATCTATGACAACAGCGGCCTGAAGCCAGACCACATACAGCGCTTGACCTACAAG 1302
Query 2443 CTGTGCCACATCTATTACAACTGGCCAGGTGTCATTCGTGTTCCTGCTCCTTGCCAGTACGCCCACAAGCTGGC 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303 CTGTGCCACATCTATTACAACTGGCCAGGTGTCATTCGTGTTCCTGCTCCTTGCCAGTACGCCCACAAGCTGGC 1376
Query 2517 TTTTCTTGTTGGCCAGAGTATTCACAGAGAGCCAAATCTGTCACTGTCAAACCGCCTTTACTACCTC 2583
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TTTTCTTGTTGGCCAGAGTATTCACAGAGAGCCAAATCTGTCACTGTCAAACCGCCTTTACTACCTC 1443
