Nucleotide Global Alignment

Description

Query:
TRCN0000478306
Subject:
XM_017026188.1
Aligned Length:
2007
Identities:
1204
Gaps:
693

Alignment

Query    1  ---------------------------------------------------ATGACCTCCATCCTCACGGTCCT  23
                                                               ||||||.||||||||||||||||
Sbjct    1  ATGCACCGAGGGCTCATCCATCCACAGAGCAGGGCAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCT  74

Query   24  GATCTGTCTCGGGCTGAGCCTGGACCCCAGGACCCACGTGCAGGCAGGGCCCCTCCCCAAGCCCACCCTCTGGG  97
            ||||||||||||||||||.||||.||||.|||||||||||||||||||||.|||||||||||||||||||||||
Sbjct   75  GATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGG  148

Query   98  CTGAGCCAGGCTCTGTGATCACCCAAGGGAGTCCTGTGACCCTCAGGTGTCAGGGGAGCCTGGAGACGCAGGAG  171
            ||||.||||||||||||||||||||.||||||||||||||||||||||||||||||.|||.||||||.||||||
Sbjct  149  CTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAG  222

Query  172  TACCATCTATATAGAGAAAAGAAAACAGCACTCTGGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCA  245
            ||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TACCGTCTATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCA  296

Query  246  GTTCCCCATCCTATCCATCACCTGGGAACATGCAGGGCGGTATTGCTGTATCTATGGCAGCCACACTGTAGGCC  319
            |||||||||||.||||||||||||||||||..|||||||||||.|||||..||||||.|||.||||||.|||||
Sbjct  297  GTTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAGGCC  370

Query  320  TCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACAGCAAACCCACCCTCTCAGCTCTGCCC  393
            .|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.|.||||
Sbjct  371  GCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCC  444

Query  394  AGCCCTGTGGTGACCTCAGGAGGGAATGTGACCATCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCT  467
            |||||.|||||||.|||||||||||||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCT  518

Query  468  GTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCATTCCCATGCCCGTGGGTCATCCCGGGCCA  541
            |||||||||||||||||||||||||||||||||||||||||||||..||||||||||||||||.|||||.||||
Sbjct  519  GTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCGCCA  592

Query  542  TCTTCTCCGTGGGCCCCGTGAGCCCAAGTCGCAGGTGGTCGTACAGGTGCTATGGTTATGACTCGCGCGCTCCC  615
            |||||||||||||||||||||||||.|||||||||||||.||||||||||||||.||||||||||..|.|||||
Sbjct  593  TCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCCC  666

Query  616  TATGTGTGGTCTCTACCCAGTGATCTCCTGGGGCTCCTGGTCCCAGGTGTTTCTAAGAAGCCATCACTCTCAGT  689
            ||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||||
Sbjct  667  TATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGT  740

Query  690  GCAGCCGGGTCCTGTCGTGGCCCCTGGGGAGAAGCTGACCTTCCAGTGTGGCTCTGATGCCGGCTACGACAGAT  763
            ||||||.||||||.||||||||||||.|||||..|||||..|.|||||||||||||||||.||||||.||||||
Sbjct  741  GCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACAGAT  814

Query  764  TTGTTCTGTACAAGGAGTGGGGACGTGACTTCCTCCAGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAG  837
            ||||||||||.|||||..|||.||||||||||||.||||.|.|||||...||||||||||||||||||||||||
Sbjct  815  TTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCCCAG  888

Query  838  GCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACACATGCTCCGGTGCATACAACCTCTC  911
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||.||||||||||
Sbjct  889  GCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTC  962

Query  912  CTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCACAGGACAGATCCGTGCCAGACCCTTCCTCT  985
            |||||||||||||||||||||||||||||||||||||||||||.||||||||.||..||.||||..||.|||||
Sbjct  963  CTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCCTCT  1036

Query  986  CCGTGCGGCCGGGCCCCACAGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGAGGGATGCAC  1059
            |.||||.||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||.
Sbjct 1037  CGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAA  1110

Query 1060  ACTTTCCTTTTGACCAAGGAGGGGGCAGCTGATTCCCCGCTGCGTCTAAAATCAAAGCGCCAATCTCATAAGTA  1133
            |||||||||.|||||||||||||||||||||||..|||...||||||||.|||||.|..|||||||||.||.||
Sbjct 1111  ACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATA  1184

Query 1134  CCAGGCTGAATTCCCCATGAGTCCTGTGACCTCGGCCCACGCGGGGACCTACAGGTGCTACGGCTCACTCAGCT  1207
            |||||||||||||||||||.|||||||||||||.|||||.||||||||||||||||||||||||||||..||||
Sbjct 1185  CCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCT  1258

Query 1208  CCAACCCCTACCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGAGCAGCTGAGACCCTCAGC  1281
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.|..|||.|..||.||||
Sbjct 1259  CCAAACCCTACCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGC  1332

Query 1282  -CCACCACAAAACAAGTCCGA-CTCCA-------AGGCTGGTGAG-----------------------------  1317
             ||.|.||  ||||.|.||.| |||||       |||| ..||||                             
Sbjct 1333  TCCCCGAC--AACAGGCCCCACCTCCACATCTGCAGGC-CCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGA  1403

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1404  TCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCC  1477

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1478  TCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCT  1551

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1552  GATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGC  1625

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1626  TGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACA  1699

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1700  CTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAA  1773

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1774  ATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCA  1847

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1848  GATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCA  1921

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1922  GACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTG  1995

Query 1318  ---------  1317
                     
Sbjct 1996  GCCATCCAC  2004

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