Nucleotide Global Alignment
Description
- Query:
- TRCN0000478308
- Subject:
- NM_001081638.3
- Aligned Length:
- 1972
- Identities:
- 1145
- Gaps:
- 647
Alignment
Query 1 ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC 74
||||.|||||.|.||||||..|||.||||.|||||||||||||||||||||.|||||.||.||||||||||||.
Sbjct 1 ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC 148
|||||||||.|||||||||||||||||.||||||||||||||||.|..|||||...||||||||.||.||||||
Sbjct 75 CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC 148
Query 149 AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACC 220
|||||..||.||||.|.|.|||||||||||| |||.||||.|||| ..|||||||||||...|.||.||.||
Sbjct 149 AGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCC 220
Query 221 CACTGGAGCCCAAGAACAA-GGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTG 293
|||.|||||....|||.|| |||||| |||.|||||||||||||.||...|||..|..|||||.|.||.|||||
Sbjct 221 CACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTG 293
Query 294 TTACTATCGCAG---CCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACA 364
|||||||.|.|| |.|||.||||.|.|||.||..||||||||||||||||||||||.|||||||||||||||
Sbjct 294 TTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA 367
Query 365 GTAAACCCACCCTTTCAGCCCTG--------------------------------------------------- 387
..|||||||||||.|||||||.|
Sbjct 368 TCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCA 441
Query 388 -------------------------------------------------------------------------- 387
Sbjct 442 CAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCC 515
Query 388 -------------------------------------------------CCGAGTC------------------ 394
|||||||
Sbjct 516 CCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGT 589
Query 395 -------------------CTCT--------------------------------------------------- 398
||||
Sbjct 590 GCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT 663
Query 399 -------------------------------------------------------------------------- 398
Sbjct 664 GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTG 737
Query 399 -------------------------------------------------------------------------- 398
Sbjct 738 TGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCG 811
Query 399 ----------------------------------------------TGTGA----------------------- 403
|||||
Sbjct 812 CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC 885
Query 404 -------------------------------------------------------------------------- 403
Sbjct 886 AGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGG 959
Query 404 --------------------------------------------------CCTCAGGAAAGAGCGTGACCCTGC 427
||||||||.|||.|||||||||||
Sbjct 960 ACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGAGAACGTGACCCTGC 1033
Query 428 TGTGTCAGTCACGGAGCCCAATGG----ACACTTTCCTTCTGATCAAGGAGCGGGCAGCCCATCCCCTACTGCA 497
||||||||||||.|.| |||| |.|||||||||||||.|||||||.|||||||..||..||.|..||.
Sbjct 1034 TGTGTCAGTCACAGGG----ATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATGACCCATGGCG 1103
Query 498 TCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCAGTGCACGGGG 571
|||.||||||..|.||..|.||||..|..||||||||||||||||||||.|||||||||||||||..||.|.||
Sbjct 1104 TCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCAGCCCATGCGG 1177
Query 572 GGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA----CTACCTGCTGTCACACCCCAGTGACCCCCTGGA 641
|||||||||||||||.|.|||||||..||| ||| ||||||||||.|.||||||||||||||||||||
Sbjct 1178 GGACCTACAGGTGCTACGGCTCACAGAGCT----CCAAACCCTACCTGCTGACTCACCCCAGTGACCCCCTGGA 1247
Query 642 GCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCCACAA---GGTCCGTCTCAACAGCTGCAGGC 711
||||.|.|||||||||.|.| ||| |||.||||| |||.||.|||| |..||..|||.|||.||||||||
Sbjct 1248 GCTCGTGGTCTCAGGACCGTCTGG-GGGCCCCAG---CTCCCCGACAACAGGCCCCACCTCCACATCTGCAGGC 1317
Query 712 CCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAGTGGTCTGAGAAGGCA-CTGGGAGGTACTGA 784
|||||||||||||||||||..||.||.|||||.|..|||||.|||||||||.||||||| ||||| |||..|||
Sbjct 1318 CCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGG-GGTTGTGA 1390
Query 785 TCGGGGTCTTGGTGGTCTCCATCCTGCTTCT-CTC-----CCTCCTCCTCTTCCTCCTCCTCCAACACTGGCGT 852
||||..|||||||||.|..||||||.||.|| ||| ||||||||||||||||.||||||.|||..|.|||
Sbjct 1391 TCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGT 1464
Query 853 CAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCAACGTCCTCCAGGGGCTGCCGAGCCAGAGCC 926
|||||.||||||.||||||.|.||||||||.|||||||||||||||.||||.|||||||||..|.|||||||||
Sbjct 1465 CAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCAACATCCTGCAGGGGCTGTGGGGCCAGAGCC 1538
Query 927 CAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGGAGAAAACTTCTGTGCTGCCGTGA 1000
||..|||.|.|||||.|||.|||||||||||||||||||.||.|.|||||.|||||||.|||.|||||||||||
Sbjct 1539 CACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGA 1612
Query 1001 AGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAGAGCCCACACGATGAAGACCCCCAGGCAGTG 1074
||.||||||||||||||||.||||||||.||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1613 AGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCG---GAGCCCACACGATGAAGACCCCCAGGCAGTG 1683
Query 1075 ACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCCTCCCCACTGTCTGGGGAATT 1148
|||||||||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1684 ACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATT 1757
Query 1149 CCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCC 1222
||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1758 CCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCC 1831
Query 1223 AGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAGAAGGCAACTGAGCCTCCTCCATCCCAGGAA 1296
||||||||||||||||||.||||||||||||.||||||||||.|.|||||||||||||||||||||||||||||
Sbjct 1832 AGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAA 1905
Query 1297 GGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCATCCAC 1344
|||.||||||||||||.||||||..||||.||||||||||||||||||
Sbjct 1906 GGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCAC 1953