Nucleotide Global Alignment

Description

• Query: TRCN0000478308
• Subject: XM_011526332.3
• Aligned Length: 2002
• Identities: 1145
• Gaps: 677

Alignment

Query    1  ATGATCCCCACCTTCACGGCTCTGCTCTGCCTCGGGCTGAGTCTGGGCCCCAGGACCGACATGCAGGCAGGGCC  74
            ||||.|||||.|.||||||..|||.||||.|||||||||||||||||||||.|||||.||.||||||||||||.
Sbjct    1  ATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACCCACGTGCAGGCAGGGCA  74

Query   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCTGGGGGAACTCTGTGACCATCTGGTGTC  148
            |||||||||.|||||||||||||||||.||||||||||||||||.|..|||||...||||||||.||.||||||
Sbjct   75  CCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCCTGTGACCCTCAGGTGTC  148

Query  149  AGGGGACCCTGGAGGCTCGGGAGTACCGTCTGGATAAAGAGGAAAG--CCCAGCACCCTGGGACAGACAGAACC  220
            |||||..||.||||.|.|.||||||||||||  |||.||||.||||  ..|||||||||||...|.||.||.||
Sbjct  149  AGGGGGGCCAGGAGACCCAGGAGTACCGTCT--ATATAGAGAAAAGAAAACAGCACCCTGGATTACACGGATCC  220

Query  221  CACTGGAGCCCAAGAACAA-GGCCAGATTCTCCATCCCATCCATGACAGAGGACTATGCAGGGAGATACCGCTG  293
            |||.|||||....|||.|| |||||| |||.|||||||||||||.||...|||..|..|||||.|.||.|||||
Sbjct  221  CACAGGAGCTTGTGAAGAAGGGCCAG-TTCCCCATCCCATCCATCACCTGGGAACACACAGGGCGGTATCGCTG  293

Query  294  TTACTATCGCAG---CCCTGTAGGCTGGTCACAGCCCAGTGACCCCCTGGAGCTGGTGATGACAGGAGCCTACA  364
            |||||||.|.||   |.|||.||||.|.|||.||..||||||||||||||||||||||.|||||||||||||||
Sbjct  294  TTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGTGACAGGAGCCTACA  367

Query  365  GTAAACCCACCCTTTCAGCCCTG---------------------------------------------------  387
            ..|||||||||||.|||||||.|                                                   
Sbjct  368  TCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCCTCCAGTGTGACTCA  441

Query  388  --------------------------------------------------------------------------  387
                                                                                      
Sbjct  442  CAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGCCTGAACTCCCAGCC  515

Query  388  -------------------------------------------------CCGAGTC------------------  394
                                                             |||||||                  
Sbjct  516  CCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAGGTGGTGGTACAGGT  589

Query  395  -------------------CTCT---------------------------------------------------  398
                               ||||                                                   
Sbjct  590  GCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGCTCCTGGTCCTAGGT  663

Query  399  --------------------------------------------------------------------------  398
                                                                                      
Sbjct  664  GTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACCCTGACTCTGCAGTG  737

Query  399  --------------------------------------------------------------------------  398
                                                                                      
Sbjct  738  TGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCTTCAGCTCGCTGGCG  811

Query  399  ----------------------------------------------TGTGA-----------------------  403
                                                          |||||                       
Sbjct  812  CACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCTACGGGGGCCAGTAC  885

Query  404  --------------------------------------------------------------------------  403
                                                                                      
Sbjct  886  AGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGACATCCTGATCGCAGG  959

Query  404  --------------------------------------------------------------------------  403
                                                                                      
Sbjct  960  TGAGGAGCCCAGCGGGTTCAGTCAGGGACCCAGGCTCCGCACAGGCCCTGCCGGGGGAGCTCAGCCGGGCCCCA  1033

Query  404  ------CCTCAGGAAAGAGCGTGACCCTGCTGTGTCAGTCACGGAGCCCAATGG----ACACTTTCCTTCTGAT  467
                  ||||||||.|||.|||||||||||||||||||||||.|.|    ||||    |.|||||||||||||.
Sbjct 1034  CGGTGGCCTCAGGAGAGAACGTGACCCTGCTGTGTCAGTCACAGGG----ATGGATGCAAACTTTCCTTCTGAC  1103

Query  468  CAAGGAGCGGGCAGCCCATCCCCTACTGCATCTGAGATCAGAGCACGGAGCTCAGCAGCACCAGGCTGAATTCC  541
            |||||||.|||||||..||..||.|..||.|||.||||||..|.||..|.||||..|..|||||||||||||||
Sbjct 1104  CAAGGAGGGGGCAGCTGATGACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCC  1177

Query  542  CCATGAGTCCTGTGACCTCAGTGCACGGGGGGACCTACAGGTGCTTCAGCTCACACGGCTTCTCCCA----CTA  611
            |||||.|||||||||||||||..||.|.|||||||||||||||||.|.|||||||..|||    |||    |||
Sbjct 1178  CCATGGGTCCTGTGACCTCAGCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCT----CCAAACCCTA  1247

Query  612  CCTGCTGTCACACCCCAGTGACCCCCTGGAGCTCATAGTCTCAGGATCCT-TGGAGGGTCCCAGGCCCTCACCC  684
            |||||||.|.||||||||||||||||||||||||.|.|||||||||.|.| ||| |||.|||||   |||.||.
Sbjct 1248  CCTGCTGACTCACCCCAGTGACCCCCTGGAGCTCGTGGTCTCAGGACCGTCTGG-GGGCCCCAG---CTCCCCG  1317

Query  685  ACAA---GGTCCGTCTCAACAGCTGCAGGCCCTGAGGACCAGCCCCTCATGCCTACAGGGTCAGTCCCCCACAG  755
            ||||   |..||..|||.|||.|||||||||||||||||||||||||||..||.||.|||||.|..|||||.||
Sbjct 1318  ACAACAGGCCCCACCTCCACATCTGCAGGCCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAG  1391

Query  756  TGGTCTGAGAAGGCA-CTGGGAGGTACTGATCGGGGTCTTGGTGGTCTCCATCCTGCTTCT-CTC-----CCTC  822
            |||||||.||||||| ||||| |||..|||||||..|||||||||.|..||||||.||.|| |||     ||||
Sbjct 1392  TGGTCTGGGAAGGCACCTGGG-GGTTGTGATCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTC  1464

Query  823  CTCCTCTTCCTCCTCCTCCAACACTGGCGTCAGGGAAAACACAGGACATTGGCCCAGAGACAGGCTGATTTCCA  896
            ||||||||||||.||||||.|||..|.||||||||.||||||.||||||.|.||||||||.|||||||||||||
Sbjct 1465  CTCCTCTTCCTCATCCTCCGACATCGACGTCAGGGCAAACACTGGACATCGACCCAGAGAAAGGCTGATTTCCA  1538

Query  897  ACGTCCTCCAGGGGCTGCCGAGCCAGAGCCCAAGGACGGGGGCCTACAGAGGAGGTCCAGCCCAGCTGCTGACG  970
            ||.||||.|||||||||..|.|||||||||||..|||.|.|||||.|||.|||||||||||||||||||.||.|
Sbjct 1539  ACATCCTGCAGGGGCTGTGGGGCCAGAGCCCACAGACAGAGGCCTGCAGTGGAGGTCCAGCCCAGCTGCCGATG  1612

Query  971  TCCAGGGAGAAAACTTCTGTGCTGCCGTGAAGAACACACAGCCTGAGGACGGGGTGGAAATGGACACTCGGCAG  1044
            .|||||.|||||||.|||.|||||||||||||.||||||||||||||||.||||||||.|||||||||||   |
Sbjct 1613  CCCAGGAAGAAAACCTCTATGCTGCCGTGAAGCACACACAGCCTGAGGATGGGGTGGAGATGGACACTCG---G  1683

Query 1045  AGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCAAGGTGAAACACTCCAGACCTAGGAGAGAAATGGC  1118
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1684  AGCCCACACGATGAAGACCCCCAGGCAGTGACGTATGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGC  1757

Query 1119  CTCTCCTCCCTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCAGAAGAGGACAGACAGATGG  1192
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 1758  CTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGGACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGG  1831

Query 1193  ACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCGGCTGCACAGCTTTACCCTCAGACAG  1266
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||.|
Sbjct 1832  ACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGG  1905

Query 1267  AAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGGCCTCTCCAGCTGAGCCCAGTGTCTATGCCACTCTGGCCAT  1340
            .||||||||||||||||||||||||||||||||.||||||||||||.||||||..||||.||||||||||||||
Sbjct 1906  GAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCCCTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCAT  1979

Query 1341  CCAC  1344
            ||||
Sbjct 1980  CCAC  1983