Nucleotide Global Alignment
Description
- Query:
- TRCN0000478333
- Subject:
- NR_073577.2
- Aligned Length:
- 3281
- Identities:
- 1313
- Gaps:
- 1942
Alignment
Query 1 ATGGCCCTCCACAGCCCGCAGTATATTTTTGGAGATTTTAGCCCTGATGAATTCAATCAATTCTTTGTGACTCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCGATCTTCAGTTGAGCTTCCTCCATACAGTGGAACAGTTCTGTGTGGCACACAGGCTGTGGATAAACTACCTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGGACAAGAATATCAGAGAATTGAGTTTGGTGTCGATGAAGTCATTGAACCCAGTGACACTTTGCCGAGAACC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCCAGCTACAGTATTTCAAGCACACTGAACCCTCAGGCCCCTGAATTTATTCTCGGTTGTACAGCTTCCAAAAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AACCCCTGATGGTATCACTAAAGAAGCAAGCTATGGCTCCATCGACTGCCAGTACCCAGGCTCTGCCCTCGCTT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGATGGAAGTTCTAATGTGGAGGCGGAAGTTTTGGAAAATGATGGTGTCTCAGGTGGTCTTGGACAAAGGGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CGTAAAAAGAAGAAAAAGCGGCCACCTGGATATTACAGCTATTTGAAAGATGGTGGCGATGATAGTATCTCCAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGAAGCCCTGGTCAATGGCCATGCCAATTCAGCAGTCCCGAACAGTGTCAGTGCAGAGGATGCAGAATTTATGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GTGACATGCCTCCGCCACTTACGCCCAGGACTTGTAACAGCCCCCAGAACTCCACAGACTCTGTCAGTGACATT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GTGCCTGACAGTCCTTTCCCCGGAGCACTCGGCAGTGACACCAGGACTGCAGGGCAGCCAGAGGGGGGCCCCGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGCTGATTTTGGTCAGTCCTGCTTCCCTGCAGAGGCTGGCAGAGACACCCTGTCAAGGACAGCTGGGGCTCAGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCTGCGTTGGTACCGATACTACTGAAAACCTTGGAGTTGCTAATGGACAAATACTTGAATCCTCGGGTGAGGGC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACAGCTACCAACGGGGTGGAGTTGCACACCACGGAAAGCATAGACTTGGACCCAACCAAACCCGAGAGTGCATC 962
|||.|||.||
Sbjct 1 ---------------------------------------------------------------GAGTGTGTAT- 10
Query 963 ACCTCCTGC-----------TGACGGC-ACGGGCTCTGCATCAGGCACCCTTCCTG-TCAGCCAG--------- 1014
.||| ||.|||| .|||| .|.|.||| |.|| .|||||.|
Sbjct 11 -----GTGCGGGCGAGAAGATGGCGGCGGCGGG---GGAAGCAG--------CGTGAGCAGCCGGAGGATCGCG 68
Query 1015 ----CCCAAGTCCTG----GGCCAGCCTCTTTCATGATTCTAAGCCCTCTTCCTCCTCGCCGGTGGCCTATGTG 1080
||||| || ||.|||| |||| ||||||..|..|| |||
Sbjct 69 GAGTCCCAA----TGAAACGGGCAGC------CATG-------GCCCTCCACAGCC-CGC-------------- 110
Query 1081 GAAACTAAGTATTCCCCTCCCGCCATATCTCCCCTGG---TTT-----CTGAAAAGCAGGTTGAAGTCAAAGAA 1146
||||| ||.| .||| ||| |||| ||||.||||..||
Sbjct 111 -------AGTAT------------ATTT-----TTGGAGATTTTAGCCCTGA---------TGAATTCAATCAA 151
Query 1147 GGGCTTGT---TC--CGGT-TTCAGAGGATCCTGTAGCCATAAAGATTGCAGAGTTGCTGGAGAATGTAACCCT 1214
....|||| || ||.| ||||| ||| ||||||||||||||||||||||||
Sbjct 152 TTCTTTGTGACTCCTCGATCTTCAG---------------------TTG-AGAGTTGCTGGAGAATGTAACCCT 203
Query 1215 AATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATTAATGCTACAC 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 AATCCATAAACCAGTGTCGTTGCAACCCCGTGGGCTGATCAATAAAGGGAACTGGTGCTACATTAATGCTACAC 277
Query 1289 TGCAGGCATTGGTTGCTTGCCCGCCGATGTACCACCTGATGAAGTTCATTCCTCTGTATTCCAAAGTGCAAAGG 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 TGCAGGCATTGGTTGCTTGCCCGCCGATGTACCACCTGATGAAGTTCATTCCTCTGTATTCCAAAGTGCAAAGG 351
Query 1363 CCTTGTACGTCAACACCCATGATAGACAGCTTTGTTCGGCTAATGAATGAGTTCACTAATATGCCAGTACCTCC 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 CCTTGTACGTCAACACCCATGATAGACAGCTTTGTTCGGCTAATGAATGAGTTCACTAATATGCCAGTACCTCC 425
Query 1437 AAAACCCCGACAAGCTCTTGGAGATAAAATCGTGAGGGATATTCGCCCTGGAGCTGCCTTTGAGCCCACATATA 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 AAAACCCCGACAAGCTCTTGGAGATAAAATCGTGAGGGATATTCGCCCTGGAGCTGCCTTTGAGCCCACATATA 499
Query 1511 TTTACAGACTCCTGACAGTTAACAAGTCAAGCCTGTCTGAAAAGGGTCGACAAGAAGATGCTGAGGAATACTTA 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 500 TTTACAGACTCCTGACAGTTAACAAGTCAAGCCTGTCTGAAAAGGGTCGACAAGAAGATGCTGAGGAATACTTA 573
Query 1585 GGCTTCATTCTAAATGGACTTCATGAGGAAATGTTGAACCTAAAGAAGCTTCTCTCACCAAGTAATGAAAAACT 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 GGCTTCATTCTAAATGGACTTCATGAGGAAATGTTGAACCTAAAGAAGCTTCTCTCACCAAGTAATGAAAAACT 647
Query 1659 TACGATTTCCAACGGCCCCAAAAACCACTCGGTCAATGAAGAAGAGCAGGAAGAACAAGGTGAAGGAAGCGAGG 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 TACGATTTCCAACGGCCCCAAAAACCACTCGGTCAATGAAGAAGAGCAGGAAGAACAAGGTGAAGGAAGCGAGG 721
Query 1733 ATGAATGGGAACAAGTGGGCCCCCGGAACAAGACTTCCGTCACCCGCCAGGCGGATTTTGTTCAGACTCCAATC 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 722 ATGAATGGGAACAAGTGGGCCCCCGGAACAAGACTTCCGTCACCCGCCAGGCGGATTTTGTTCAGACTCCAATC 795
Query 1807 ACCGGCATTTTTGGTGGACACATCAGGTCTGTGGTTTACCAGCAGAGTTCAAAAGAATCTGCCACTTTGCAGCC 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 ACCGGCATTTTTGGTGGACACATCAGGTCTGTGGTTTACCAGCAGAGTTCAAAAGAATCTGCCACTTTGCAGCC 869
Query 1881 ATTTTTCACGTTGCAGTTGGATATCCAGTCAGACAAGATACGCACAGTCCAGGATGCACTGGAGAGCTTGGTGG 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 ATTTTTCACGTTGCAGTTGGATATCCAGTCAGACAAGATACGCACAGTCCAGGATGCACTGGAGAGCTTGGTGG 943
Query 1955 CAAGAGAATCTGTCCAAGGTTATACCACAAAAACCAAACAAGAGGTTGAGATAAGTCGAAGAGTGACTCTGGAA 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 CAAGAGAATCTGTCCAAGGTTATACCACAAAAACCAAACAAGAGGTTGAGATAAGTCGAAGAGTGACTCTGGAA 1017
Query 2029 AAACTCCCTCCTGTCCTCGTGCTGCACCTGAAACGATTCGTTTATGAGAAGACTGGTGGGTGCCAGAAGCTTAT 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 AAACTCCCTCCTGTCCTCGTGCTGCACCTGAAACGATTCGTTTATGAGAAGACTGGTGGGTGCCAGAAGCTTAT 1091
Query 2103 CAAAAATATTGAATATCCTGTGGACTTGGAAATTAGTAAAGAACTGCTTTCTCCAGGGGTTAAAAATAAGAATT 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 CAAAAATATTGAATATCCTGTGGACTTGGAAATTAGTAAAGAACTGCTTTCTCCAGGGGTTAAAAATAAGAATT 1165
Query 2177 TTAAATGCCACCGAACCTATCGGCTCTTTGCAGTGGTCTACCATCACGGCAACAGTGCGACGGGCGGCCATTAC 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1166 TTAAATGCCACCGAACCTATCGGCTCTTTGCAGTGGTCTACCATCACGGCAACAGTGCGACGGGCGGCCATTAC 1239
Query 2251 ACTACAGACGTCTTCCAGATCGGTCTGAATGGCTGGCTGCGCATCGATGACCAGACAGTCAAGGTGATCAACCA 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 ACTACAGACGTCTTCCAGATCGGTCTGAATGGCTGGCTGCGCATCGATGACCAGACAGTCAAGGTGATCAACCA 1313
Query 2325 GTACCAGGTGGTGAAACCAACTGCTGAACGCACAGCCTACCTCCTGTATTACCGCCGAGTGGACCTGCTG---- 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 GTACCAGGTGGTGAAACCAACTGCTGAACGCACAGCCTACCTCCTGTATTACCGCCGAGTGGACCTGCTGTAAA 1387
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1388 CCCTGTGTGCGCTGTGTGTGCGCCCAGTGCCCGCTTCGTAGGACACCACCTCACACTCACTTCCCGCCTCTCTT 1461
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1462 TAGTGGCTCTTTAGAGAGAAACTCTTTCTCCCTTTGCAAAAATGGGCTAGAATGAAAAGGAGATGCCTTGGGGT 1535
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1536 TCGTGCACAACACAGCTTCTGTTGACTCTAACTTCCAAATCAAAATCATTTGGTTGAAACAGACTGTTGCTTGA 1609
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1610 TTTTAGAAAATACACAAAAACCCATATTTCTGAAATAATGCTGATTCCTGAGATAAGAAAGTGGATTTGATCCC 1683
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1684 CAGTCTCATTGCTTAGTAGAATAAATCCTGCACCAGCAACAACACTTGTAAATTTGTGAAAATGAATTTTATCT 1757
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1758 TTCCTTAAAAAAGAAATTTTTTAATCCATCACACTTTTCTTCCCTACCCTTTAGTTTTTGATAAATGATAAAAA 1831
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1832 TGAGCCAGTTATCAAAGAAGAACTAGTTCTTACTTCAAAAGAAAAATAAACATAAAAAATAAGTTGCTGGTTCC 1905
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1906 TAACAGGAAAAATTTTAATAATTGTACTGAGAGAAACTGCTTACGTACACATTGCAGATCAAATATTTGGAGTT 1979
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 1980 AAAATGTTAGTCTACATAGATGGGTGATTGTAACTTTATTGCCATTAAAAGATTTCAAATTGCATTCATGCTTC 2053
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 2054 TGTGTACACATAATGAAAAATGGGCAAATAATGAAGATCTCTCCTTCAGTCTGCTCTGTTTAATTCTGCTGTCT 2127
Query 2395 -------------------------------------------------------------------------- 2394
Sbjct 2128 GCTCTTCTCTAATGCTGCGTCCCTAATTGTACACAGTTTAGTGATATCTAGGAGTATAAAGTTGTCGCCCATCA 2201
Query 2395 ------------------------- 2394
Sbjct 2202 ATAAAAATCACAAAGTTGGTTTAAA 2226
