Nucleotide Global Alignment
Description
- Query:
- TRCN0000478368
- Subject:
- NR_144488.1
- Aligned Length:
- 2749
- Identities:
- 1060
- Gaps:
- 1689
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTGTCCACAGTCTCGTAGCTACCAAGTGACAGGCCACGATTTGATCTCAGGCCAGTGTGTTAAACTCCAATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGTGCTCCTGTCCCTCCCCGCGCGTCGGCGGAGCTCGGGGCCGGACTGGACCTGCCGAGGGAGGGGCGGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCTGACGGTGCGGGGCGGGGCTGGCGGCTGCCCAGGCCTGGCTGAGGCGCCGCGGCCGGGTCCCTCTCCACC 222
Query 1 ---------------------------------------------------------ATGGGCGATCGCGAGCG 17
|||||||||||||||||
Sbjct 223 TGCCGGGCGGAGCGCACGGGCCATGGGCTGAGCCCCGCTGAGCCCGCCGGGCCGGCCATGGGCGATCGCGAGCG 296
Query 18 CAACAAGAAGCGGCTGCTGGAGCTGCTGCGGGCGCCGGACACAGGCAACGCGCACTGCGCCGACTGCGGGGCGG 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAACAAGAAGCGGCTGCTGGAGCTGCTGCGGGCGCCGGACACAGGCAACGCGCACTGCGCCGACTGCGGGGCGG 370
Query 92 CAGATCCCGACTGGGCCTCTTACAAGCTGGGGATCTTCATCTGTCTCAACTGCTGCGGCGTCCACCGTAACTTC 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAGATCCCGACTGGGCCTCTTACAAGCTGGGGATCTTCATCTGTCTCAACTGCTGCGGCGTCCACCGTAACTTC 444
Query 166 CCTGACATCAGCAGAGTTAAATCTGTGCGACTTGACTTCTGGGACGACAGTATTGTGGAGTTTATGATCCACAA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCTGACATCAGCAGAGTTAAATCTGTGCGACTTGACTTCTGGGACGACAGTATTGTGGAGTTTATGATCCACAA 518
Query 240 TGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACT 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCCCAGCTTTCTACTACATCCCCCAGGCCAACGACT 592
Query 314 GCCTGGTCTTAAAGGAACAATGGATTCGAGCTAAGTATGAGAGACGGGAATTTATGGCTGATGGGGAAACCATC 387
||||
Sbjct 593 GCCT---------------------------------------------------------------------- 596
Query 388 TCGCTCCCAGGTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTT 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 ----------GTAACCGAGAAGGATTCCTGTGGAAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTT 660
Query 462 TGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGAACAGGGTAAAAGCCCCAAAGCTGTCATCA 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TGTACTTCTGGCAAGAGAAGGCCTCCTGAAGTACTTCACAAAGGAACAGGGTAAAAGCCCCAAAGCTGTCATCA 734
Query 536 GCATTAAGGACTTGAATGCCACCTTCCAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGG 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GCATTAAGGACTTGAATGCCACCTTCCAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGG 808
Query 610 AGAGATGGCCACACCAGGAACCTGTTTGTGTATCATGAAAGTGGGAAGGAGATAGTGGACTGGTTCAATGCCCT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AGAGATGGCCACACCAGGAACCTGTTTGTGTATCATGAAAGTGGGAAGGAGATAGTGGACTGGTTCAATGCCCT 882
Query 684 CCGTGCAGCCCGTCTGCAGTACCTAAAAATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTGCCATTCCTCA 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CCGTGCAGCCCGTCTGCAGTACCTAAAAATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTGCCATTCCTCA 956
Query 758 CCAGGAACTACCTCAAACAAGGCTTCATGGAAAAGACTGGGCCAA---AGAAAGAACCTTTCAAGAAAAGGTGG 828
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 957 CCAGGAACTACCTCAAACAAGGCTTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCTTTCAAGAAAAGGTGG 1030
Query 829 TTCGCCCTGGATTGCCATGAGCGGAGGCTGCTCTATTACAAGAACCCACTGGATGCCTTCGAGCAGGGCCAGGT 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TTCGCCCTGGATTGCCATGAGCGGAGGCTGCTCTATTACAAGAACCCACTGGATGCCTTCGAGCAGGGCCAGGT 1104
Query 903 TTTTCTTGGGAACAAGGAGCAGGGATATGAAGCCTACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCTGGA 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 TTTTCTTGGGAACAAGGAGCAGGGATATGAAGCCTACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCTGGA 1178
Query 977 AAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGAAGGAACAGCAGGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 AAGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGAAGGAACAGCAGGAA 1252
Query 1051 TGGCTGGAAAGTTTGCGGGGTGTCCTGTCCAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATCAACAGAGAG 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 TGGCTGGAAAGTTTGCGGGGTGTCCTGTCCAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATCAACAGAGAG 1326
Query 1125 TGGCCGCAGCAGCAGG---------------------------------------------------------- 1140
||||||||||||||||
Sbjct 1327 TGGCCGCAGCAGCAGGTGACCCATTAACTGAGGAACTGGCTGCCACTGAACACCTGGAACTCCTTGTGGGAAGA 1400
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1401 AGTTTGCACCTCGGCCCTGGCTGCCCACCATCAGTGCCCCGCAGTCAGCAGCCATTCCTGGCAGTGAACTCTGC 1474
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1475 CAGGACTGAAGCTGTGGCTTTATCCATCAGCTCCCTGGGCCTTCCCCGCAACCCACCTCGGGGATCTGAGGATC 1548
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1549 TGGTGCATAGATGAACATCTATCCCCTCCTCCCCCATACACACCTAGGCTTGAAATGCCCTACAGGCCCAGAAC 1622
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1623 TTTCTCACATCTGAAATGGAGGCATTGCAATGAAAAGGCACCCACAGCATCATGCAAGTGGCATCTTGTAAAAA 1696
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1697 AAAAAAAAAAGTTTAATCTGAATCTAACCATGAGGAAATAATCAGACAAATCCACATTAGGGGCATTCTGCTAA 1770
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1771 ACATCTGACCCAGACTCTTCAAAAATGAAGAGTGAAAGATAAAGTAGTCAATGGCCGGGCGCAGTGAGATTGCG 1844
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1845 CCATTGCATTCCAGCCTGGGTGACAGAGCGAGACTCCGTATCAGAAAGAAAAAGAGGAACTGAATGAAATCTCA 1918
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1919 GATGGCTGAAATGTTAGAGAAACAGAGCACCAAGTCCCCTGCTCTGTGACTCGTTGTTCCTTTCCTCTGTCTTC 1992
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 1993 AAGCACCACGCAGAAATACACTGGATGTTCTCTCTTTGCTTCAATGGAGACCCAAGGAGCTGGGAGGTCTCTTA 2066
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2067 AGAGACTCTCTGATTCTCCGTGGCTGGGTGTGATGGCTCATGCCCATAATCCCAGCCCTTTGGGAAGCTGAGGC 2140
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2141 AGGAGGATTGAGACCAGGAGTTCGAGAAGAGCCTGGGCAACATAGTGAGACCCCATCTCTACAAAGAAAAAAAA 2214
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2215 ATTAGCTGGACATGGTAATGAATGCCTGTAGTCCCAGCTACTCCGGACACTGATGTGAGAGGATCACTTGAGCC 2288
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2289 AGGGAGGTCATGGCTACAGTGACCCCTCATTGCACCACTTTACTTAGCCTGGGTGACAGAGTGAGACCCTATCT 2362
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2363 CAAAAAAAAAAAAAATCTATGCATTGTATGGGACTTTCCTTTGGATCCCCCAATCAAAGGATAAGCAATGCGTA 2436
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2437 AGCCTGTGTCCTTCCTGAAGCTTCTCGACTGCCCAGATAGGGAGGTGAGTCCTCTCTATCTCCTCTGGCTCTGG 2510
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2511 AAGCACCTTGAAAATGTGCATTTTCAAGGACACTTGCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCCT 2584
Query 1141 -------------------------------------------------------------------------- 1140
Sbjct 2585 CTTTGACCACCTGTGAACTCTGTTGGGTGTACTCTGCTAAGTTCTGGGGATGAGGAAATTAATAAAGGTACAGT 2658
Query 1141 ----------- 1140
Sbjct 2659 CTTGCCTTCAA 2669
