Construct: ORF TRCN0000478368

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016804.2_s317c1
Derived from:
ccsbBroadEn_12276
DNA Barcode:
GGCCAGGCGATGAATATCAAATCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADAP2 (55803)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478368
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55803 ADAP2 ArfGAP with dual PH domains 2 NM_001346714.1 100% 100%
2 human 55803 ADAP2 ArfGAP with dual PH domains 2 NM_018404.3 99.7% 99.7% 803_805delAGC
3 human 55803 ADAP2 ArfGAP with dual PH domains 2 XM_024450832.1 98.4% 98.4% 224_241del
4 human 55803 ADAP2 ArfGAP with dual PH domains 2 NM_001346712.1 98.1% 98.1% 224_241del;821_823delAGC
5 human 55803 ADAP2 ArfGAP with dual PH domains 2 XM_024450833.1 93.2% 93% 224_241del;760_761ins60
6 human 55803 ADAP2 ArfGAP with dual PH domains 2 XM_024450831.1 93.1% 92.3% (many diffs)
7 human 55803 ADAP2 ArfGAP with dual PH domains 2 NM_001346716.1 92.9% 92.9% 803_805delAGC;1032_1033ins78
8 human 55803 ADAP2 ArfGAP with dual PH domains 2 XM_024450834.1 91.4% 91.4% 224_241del;821_823delAGC;1050_1051ins78
9 human 55803 ADAP2 ArfGAP with dual PH domains 2 XM_024450835.1 67.7% 67.7% 0_1ins366;437_439delAGC
10 human 55803 ADAP2 ArfGAP with dual PH domains 2 NR_144488.1 38.5% (many diffs)
11 mouse 216991 Adap2 ArfGAP with dual PH domains 2 NM_172133.1 86.3% 84.5% (many diffs)
12 mouse 216991 Adap2 ArfGAP with dual PH domains 2 XM_006532973.3 59.9% 60.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1206
ORF length:
1140
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg cgatcgcgag cgcaacaaga agcggctgct ggagctgctg cgggcgccgg
121acacaggcaa cgcgcactgc gccgactgcg gggcggcaga tcccgactgg gcctcttaca
181agctggggat cttcatctgt ctcaactgct gcggcgtcca ccgtaacttc cctgacatca
241gcagagttaa atctgtgcga cttgacttct gggacgacag tattgtggag tttatgatcc
301acaatggaaa cctccgtgtg aaggccaagt tcgaagccag agtcccagct ttctactaca
361tcccccaggc caacgactgc ctggtcttaa aggaacaatg gattcgagct aagtatgaga
421gacgggaatt tatggctgat ggggaaacca tctcgctccc aggtaaccga gaaggattcc
481tgtggaagcg aggaagggac aactcacagt ttctgagaag gaagtttgta cttctggcaa
541gagaaggcct cctgaagtac ttcacaaagg aacagggtaa aagccccaaa gctgtcatca
601gcattaagga cttgaatgcc accttccaga cagagaagat agggcacccc catgggctgc
661agatcaccta caggagagat ggccacacca ggaacctgtt tgtgtatcat gaaagtggga
721aggagatagt ggactggttc aatgccctcc gtgcagcccg tctgcagtac ctaaaaatgg
781cctttcctga actcccagag tctgagctcg tgccattcct caccaggaac taccTCAAAC
841AAGGCTTCAT GGAAAAGACT GGGCCAAAGA AAGAACCTTT CAAGAAAAGG TGGTTCGCCC
901TGGATTGCCA TGAGCGGAGG CTGCTCTATT ACAAGAACCC ACTGGATGCC TTCGAGCAGG
961GCCAGGTTTT TCTTGGGAAC AAGGAGCAGG GATATGAAGC CTACGAAGAC CTGCCCAAGG
1021GCATCCGAGG AAATCGCTGG AAAGCCGGAC TCACCATTGT CACCCCAGAG CGGAGATTTG
1081TCCTCACTTG CCCCAGTGAG AAGGAACAGC AGGAATGGCT GGAAAGTTTG CGGGGTGTCC
1141TGTCCAGCCC CTTGACGCCC CTCAACCGGC TTACTGCATC AACAGAGAGT GGCCGCAGCA
1201GCAGGTGCCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
1261TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGTA ACTTGAAAGT ATTTCGATTT
1321CTTGGCTTTA TATATCTTGT GGAAAGGACG AGGCCAGGCG ATGAATATCA AATCTACGCG
1381TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)