Nucleotide Global Alignment

Description

• Query: TRCN0000478485
• Subject: NM_001190400.1
• Aligned Length: 1341
• Identities: 907
• Gaps: 288

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGTTCTCGGAGAGGAAAAGAAGCAGGAAATCCCAGAGCTTCAAACTGGTGAGCCGAGATTATCACCATGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTGTATAAAATCTCAGAATTCAGCAATGATGTTAATGGGGAGACCAAAGAGACACAACCCATTTACTTAGGAG  148

Query    1  -----------------------------------ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTAT  39
                                               |||||||||||.|||||.|||||||||||..||||.|||
Sbjct  149  ACGAAAGCATGGAAATTAAAAAACAAATTACGGGGATGAGAAGATTACTGAATGACAGCACTGGAAGGATATAT  222

Query   40  CAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT  113
            |||||.||.||||||||||||||.|||.|||||.|||||||.||||...||||||||||||||||||..||.|.
Sbjct  223  CAGCGTGTCGGCAAAGAAGGAGAAAAATTAAAACAAGAGCCGCAGGTTGTGGATTTAGTCTGGCCTCAGCGGTC  296

Query  114  GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGA  187
            .|||||.||..|.||||||.|.||..||||||||.|...|||||||||.|.|||||||||.|||||..||||.|
Sbjct  297  CAACTCTTCCACCGAGGCCTCACAGGGCCTCCACTCTAATTCACGTGGGGCGTGGAATGAACTACCAACCCAAA  370

Query  188  GTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCAC-CCTACCACGAGCTC  260
            |.||.||||||||||||||||.|||..|.||.||.|||||||||||.|..||||||||| .|| |..|.||.||
Sbjct  371  GCGGGCAGTTCTCAGGGCAGTCTGGTCCACGCTCCAGAACCTTCCAGACTCAGCCCCACATCT-CTGCAAGTTC  443

Query  261  CAATGGTATGGTTGTCAACAAACATTCAGAAGGCTCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTG  334
            ||||                                       |||||||||||||.||||||||||..||..|
Sbjct  444  CAAT---------------------------------------GGAGAACTTCCAGGGGTGAATTCAATAGTCG  478

Query  335  GATCAAACTGCTGTACTTGTAACTGCCAGTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAA  408
            ||||.|||||||||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||||||
Sbjct  479  GATCCAACTGCTGTACTTGTAACTGCCAGTCAACCTTGCAGGCCATTCTCCAAGAGCTCAAGACCATGAGGAAA  552

Query  409  TTAATGCAAATTCAAGCAGTTGGAACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAAC  482
            ||||||||..||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct  553  TTAATGCAGTTTCAAGCAGTTGGAACTCAAAACAGACAACAACCCCCAATTTCCCTTATGTGCTCCCAGCGAAC  626

Query  483  TGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTA---CTGTGAAAC  553
            .||.||||||||.|||||||||||||||||||||||||..||.|||||||||.|||||.|.|   |||||.|||
Sbjct  627  CGCCGTCTCACGCAAGAGAAATAAAAAGAAAAAAGTGCTTCCGAAGACTGTGCAACCTGTGACGGCTGTGGAAC  700

Query  554  AGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGTGG---TGGCCTCTGAGCTATCTGCTCTCCAGGCAGCC  624
            ..|||||||||...|..||.|..|||||.|||.|.|..|   .||||.|...||.|.|.|.||||||.||.||.
Sbjct  701  CAAAGCCCAGTCCCTTGGAAACTGAGAAGAAGCCAGCAGCCTCGGCCACAAGGCCACCAGGTCTCCAAGCTGCA  774

Query  625  GAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGA  698
            ||||.|||||||.|.|||||||.||.|||.||.|||||.|||||||||||||||||.||.||||||||||||||
Sbjct  775  GAGCGCACCTCCACCGAGGAGAACCACGTCCTGGGATTTGGCATTGTTCTGGAATCGCCGTCCTCAGATCCAGA  848

Query  699  AGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTC  772
            |||.|||||||||||||||||.||.|||||||||||.|||||||||||||||||||||.|||||||||||||||
Sbjct  849  AGTGCAACTTGCTGAAGGCTTCGATGTGTTTATGCCCAAATCTCAGCTGGACTCTATACTGTCAAACTACACTC  922

Query  773  GCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCC  846
            |||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct  923  GCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCATTTTTTGACGACAAGACTTTGGCTAACTCCTTACCC  996

Query  847  AATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGT  920
            ||.||.|||.||||||||||..|||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  997  AACGGAAAGCGGAAAAGAGGGTTCAATGACAACCGGAAAGGACTAGACCAAAACATTGTGGGTGCAATAAAAGT  1070

Query  921  CTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTGCAGATTCTAC  994
            |||.||||||||.||||||||.||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.|
Sbjct 1071  CTTTACAGAAAATTACTGTACTGCGAATCATGTGGATAAACTTCCTGGCCCCAGAGACTGGGTGCAGATTCTGC  1144

Query  995  AGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCTCAGAGATCGCGGACAGTGATGAAAGACTGGAC  1068
            |||||||.|||||||||||||||||||||||.|||.|||||||||||.|.||.|||.|||||||||||||||||
Sbjct 1145  AGGATCAGATTAAACTGGCCAGAAGAAGGTTGAAACGAGGCTCAGAGGTAGCTGACGGTGATGAAAGACTGGAC  1218

Query 1069  GGCATTGCTCTACCACCAACAGTGGTC-----------------------------------------------  1095
            .||||..|||||||.||||||  ||||                                               
Sbjct 1219  CGCATCTCTCTACCCCCAACA--GGTCATACATTTGTCATCAAGAGAGAGACCCCAGAGGACCCAGAACCAGGT  1290

Query 1096  ---------  1095
                     
Sbjct 1291  TCCGTGGCC  1299