Nucleotide Global Alignment

Description

• Query: TRCN0000478485
• Subject: XM_011519392.2
• Aligned Length: 1596
• Identities: 1054
• Gaps: 540

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGTTCTCCGAGAGGAAAAGAAGCAGGAAATCCCAGAGCTTCAAACTGGTGAGCCGAGATTATCACCACGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTGTATAAGATCCCAGAATTCAGCAACGATGTTAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAG  148

Query    1  -----------------------------------ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTAT  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  149  ATGAAAGCATGGAAATAAAAAAGCAAATTACAGGGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTAT  222

Query   40  CAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAAGAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTT  296

Query  114  GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGA  187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCACCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGA  370

Query  188  GTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCC  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTGGACAGTTCTCAGGGCAGTATGGCACCCGTTCTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCC  444

Query  262  AATGGTATGGTTGTCAACAAACATTCAGAAGGCTCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGG  335
            |||                                       ||||||||||||||||||||||||||||||||
Sbjct  445  AAT---------------------------------------GGAGAACTTCCAGTGGTGAATTCATCAGCTGG  479

Query  336  ATCAAACTGCTGTACTTGTAACTGCCAGTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAAT  409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  480  ATCAAACTGCTGTACTTGTAACTGCCAGTCAACGTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAAT  553

Query  410  TAATGCAAATTCAAGCAGTTGGAACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACT  483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  554  TAATGCAAATTCAAGCAGTTGGAACTCAAAACAGACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACT  627

Query  484  GCTGTCTCACGAAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAA  557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  628  GCTGTCTCACGAAAGAGAAATAAAAAGAAAAAAGTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAA  701

Query  558  GCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGTGGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACA  631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  702  GCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGTGGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACA  775

Query  632  CCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAA  705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  776  CCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCGGCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAA  849

Query  706  CTTGCTGAAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGG  779
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  850  CTTGCTGAAGGCTTTGACGTGTTTATGCCTAAATCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGG  923

Query  780  AAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGA  853
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  924  AAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTTTTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGA  997

Query  854  AGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACA  927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  998  AGAGGAAAAGAGGACTCAATGACAACCGGAAAGGACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACA  1071

Query  928  GAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCA  1001
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1072  GAAAAGTACTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCA  1145

Query 1002  AATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTG  1075
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146  AATTAAACTGGCCAGAAGAAGGTTAAAAAGAGGCTCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTG  1219

Query 1076  CTCTACCACCAACA-------GTGGTC-----------------------------------------------  1095
            ||||||||||||||       |||||.                                               
Sbjct 1220  CTCTACCACCAACAGGTGCTTGTGGTGGGCCCTGCACTGTTCTGCCGGGTGGGAGTGCAGCGGTGACCCTAGTC  1293

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1294  TTGCAGAGCTCACCTCAGACAATGTCACAAGAAAAGGGACAGATGGCAGAACCCTGGGAGGAGCAGCATCTCGT  1367

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1368  GCTCCTGAACAACCTTACCAGAGACAGAGCTGAAACAGGAGCTTTGTCCCAAACCAGCCAAGACTTCAAGCACC  1441

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1442  ATTCATTCCTCATAACTCAGGTCTCAGCTACACTTCATCATCAGAGAGGGATTCGCAACTTTCCCACGCCAGGC  1515

Query 1096  ------------------------------------------  1095
                                                      
Sbjct 1516  TCAGCCAAGTCTCTTACCCTTCACATCTCTTGCCTCTCTCTC  1557