Nucleotide Global Alignment

Description

Query:
TRCN0000478485
Subject:
XR_001747061.1
Aligned Length:
3487
Identities:
865
Gaps:
2620

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAGATGAAAGCATGGAAATAAAAAAGCAAATTACAG  74

Query    1  --ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA  148

Query   73  GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA  222

Query  147  CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT  220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT  296

Query  221  CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC  370

Query  295  TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC  444

Query  369  GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA  518

Query  443  GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA  592

Query  517  GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT  666

Query  591  GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG  740

Query  665  GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA  738
            |||||||||||||||||||||||||||||                                             
Sbjct  741  GCATTGTTCTGGAATCACCTTCCTCAGAT---------------------------------------------  769

Query  739  TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT  812
                                                                                      
Sbjct  770  --------------------------------------------------------------------------  769

Query  813  TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG  886
                                                                                      
Sbjct  770  --------------------------------------------------------------------------  769

Query  887  GACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG  960
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct  770  ---------------------------------TCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG  810

Query  961  CTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG  1034
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  CTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG  884

Query 1035  CT---CAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACAGTGGTC----------  1095
            ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||.          
Sbjct  885  CTCAGCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACA--GGTAATATATTTGA  956

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct  957  CACCAGGAGAGAAAACACGGAGGACACAGAACCAGGTTTCATTGCCTAGACTTTGATTTTAGTGACATTGTTGA  1030

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1031  GTGGCATATGTAACTTCCGTTTGAATTTCCACAAAGATCCACGTAGCATTTCAGGTTCCTGCAAAGTGTGGGTG  1104

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1105  TTCTGTCAAGCTTACCTGTCATGTTTGAATAGTTTCATATACTTTCTTTGTAATGTGTGATAACCAAGCCTCCA  1178

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1179  ATCTGGTATAAGATTTTTTAAATCATTTTTAGGGTTGATTTGTTACCCTTTAAAAGTCCAGCATATGATTCAGT  1252

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1253  GAGTTCATTGTCCATTATAAAGAAGTGGTTCTCTCTTCCCTGTTTTCATTCAAAACCTCAGTATGAATATAGAG  1326

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1327  CTTTGAAACGTATTTATTTTAATGTAAATTGCTTAGATGCAGTATAAAGGAGAATGGCTCTTTCCAGTGCTGAG  1400

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1401  AGAGCAGTTGTGAAGGCCAAGATTAATTAGACCTTCATCATCTTAGAAGATGAAAAAGTTGTTTTGGGAGATAG  1474

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1475  GATAGCTCTGACCTGTAAGATGAAATCATTCATGACGTCAGTGCCCCCCAAATAGCCATTTGTAACTGAGTAAG  1548

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1549  TGCAAATGACCTATGAGTTCTTAGGAAAGAAAAACCTTTCACCTAAGTTGCGTCAACACAATGACAAAATAACT  1622

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1623  AATTAAAAGGTGAGAAAACCAGTAAATTATCTACATGATACCTGACAGCCATTTTAACAGATGGTCTTAACGGA  1696

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1697  GTGCTACAGGGTTTTGGCACCATGTGGTAACTAGCTAAAAATGTACTTAATATTATGTCATTTATTTGGTTCCT  1770

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1771  AGTATACTTGCCCTCCACTTTATATAAAACTAATTTATGAAAATCTGGATTTATTTTAAAAAGATATCTTGCCA  1844

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1845  TGAAGGTATTTGTTTTATAGAAATATTTACCTCCAGATTTCTTTCTCTAATAAGATGGTGAATTTAAAACACTG  1918

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1919  TGTTATTTAGAAACACTGCATTTACACTTCATTTATTGTATAAAGCAAATTGCATTGAATCTTCGCCACTTGAC  1992

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1993  CCAAAGGCCAAAAATTGGCATGAGAACAATTTGGACTACACATCACCAAACCCGGGGTTCACACCTGTCCACTA  2066

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2067  GCAGTTCCAGTGCCTTCCCCTAGCCCTGGATTTGGCAAAGCACAGAATGTTAAGAGCTAAAAGTTATTGTAGAG  2140

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2141  GCTACTCAGTCCCACCCGGGAAACTGAGGATGAATGAGGGTAAGCGGTTGCCCAGAGCCCGTTAACCCCTCCGT  2214

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2215  GGCTGGGGCCCTGCCTAGAACCCGAATTTCCTGACTACCCTGTCCAAGGTATTCATGTCACATCACACTGAAAC  2288

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2289  GCTAAACCTAGAGATAGGAGAGGCCCTCTGGGATAAATCCCTGTTCCACCAAAGACCAGCCAGTCATCAAAGAT  2362

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2363  GAGAGAAGGCATCCCTGTACTGTAACAAAAAGCTGGCTTTAGGCGTGGCTTGTAGAATCAATCTAACTACTAGA  2436

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2437  CAAGTTACATCTCATATATGTGTGGCTTCTTTTTCTTCTTTTGGGGGGCTACAAGGAAGGTTTGGAGAAATTAT  2510

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2511  TTCCATCATACCTTTTTGTTAGCCTTTTTCCATTTCTGGCCAGTAAGTAATCCCGTTCCTGACAACAGTCCCTT  2584

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2585  TGTTTTCTCAAGTGGTCTGATGAAGGACTGCAAACCACAGCTCTTGTGTTTTTTGCACCATGGGTTTTAAAATC  2658

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2659  CGTCCTCTGCCTCCCACAAGGAGCTACTACCCAAGGGAAGGGAGAAGATTAATTGGTGACCTTTCGCCGTGTTA  2732

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2733  AAATAGGATGAGTATGTTGCTGGTCAAGGCAGAAACGCTAACTTCCAACTGTGGTCTGTTAAGAGATCTGCTGG  2806

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2807  GAACCTTCAGAAGCACTGCCTTCCAAGGCGGGGCCACAGCTTGGGGTGTTCAGCACTTGAGGACGGGTGGAGCT  2880

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2881  TGTTCAACCCAAAGATGTGTGCGATGAACGGATCTACACACTGGAAATACGTATCAAAACTGCAACAGCAAAAT  2954

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2955  CATATTTTGTAAATTAAAATTGTGTTTACTTACTGTGACTACTGTTCAGTCTTTATTCAGAAACCTTTTTATAG  3028

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 3029  GCTTTCTTAGCAAAAAAAAAATCCATATCTATGGATAATGTCTCAATCTTCTGTATATATGTTTTATTAATATG  3102

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 3103  TAAATATTTAGATTTTTTAAAATTACTATGTTCTTTAAAAAAGAATTCAATGCAAGCCTGGTTGTGAAAATGGT  3176

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 3177  GTATAACATTGTGTTGTGGTATCAATTCCCAAGATGCTCTTTATGTCTGATCTGGAAGAATACAATAAATTACT  3250

Query 1096  ---------  1095
                     
Sbjct 3251  TTAATTGAA  3259

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