Nucleotide Global Alignment

Description

Query:
TRCN0000478485
Subject:
XR_002956968.1
Aligned Length:
2615
Identities:
865
Gaps:
1748

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAGATGAAAGCATGGAAATAAAAAAGCAAATTACAG  74

Query    1  --ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA  148

Query   73  GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA  222

Query  147  CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT  220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT  296

Query  221  CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC  370

Query  295  TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC  444

Query  369  GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA  442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA  518

Query  443  GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA  592

Query  517  GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT  666

Query  591  GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG  740

Query  665  GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA  738
            |||||||||||||||||||||||||||||                                             
Sbjct  741  GCATTGTTCTGGAATCACCTTCCTCAGAT---------------------------------------------  769

Query  739  TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT  812
                                                                                      
Sbjct  770  --------------------------------------------------------------------------  769

Query  813  TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG  886
                                                                                      
Sbjct  770  --------------------------------------------------------------------------  769

Query  887  GACTAGACCAAAATATTGTGGGTGCAATAAAAGTCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG  960
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct  770  ---------------------------------TCTTCACAGAAAAGTACTGTACAGCTAACCATGTGGATAAG  810

Query  961  CTTCCTGGCCCAAGAGATTGGGTGCAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG  1034
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  CTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAGGATCAAATTAAACTGGCCAGAAGAAGGTTAAAAAGAGG  884

Query 1035  CT---CAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACAGTGGTC----------  1095
            ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||.          
Sbjct  885  CTCAGCAGAGATCGCGGACAGTGATGAAAGACTGGACGGCATTGCTCTACCACCAACA--GGTAAATAAAACGC  956

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct  957  ATTTACATTTTCATCACCTCCTGGAAAATACAGCCCACAAAACTATTTGCATTGAAAACGATTTTAACATTAGA  1030

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1031  CATGCAGACACTTGAGCAAACTGCTTCTGCAGTGGACCAGGCCCCGTCATTGGAGCTTCTCAAGGCCCCGTACT  1104

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1105  CAGAGATGTTTTTCATACTGAATAGAAAAACGTTTTTCTCACACTCTTATTTTCATAAAAATCTCAGAAGAGCA  1178

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1179  AATCCTAAGAACTAAGTATCATAACATTTTGCCTCCCCAAACCTTTGGACATTACAAAATATTTTTAACGTGAA  1252

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1253  ATGAGATTTCACCTTAAAACGGGGACCACTAATTTTGTGTGATCAAATTCATGGCTAGGCTGTCCTCTCCCACC  1326

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1327  TCCTCCAAACGGCCTTGGAGCCTTGAGCAGTCAATCAGTGGACACCCAGTGAATACTATGTTTTAACTGAGCGA  1400

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1401  TTTGAACAAGGCCAGCCATCCGGCGTGAGTGGCACATTCCTAATACCAGGACCAGATCAGCTGAAGATACCCTT  1474

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1475  CCATGGAAGCATTTGCTGCACGCTGTTGTGTTAAGCCATAGACATAATTCCAACTTCATGTTATTTGACTCTCA  1548

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1549  AGTAATGCTTCTGACCCTGGCTTCCTACCTGTGTATGGGTTCATATCTGAGAGCCAGAGGGGCAGGTGTCTGAT  1622

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1623  CAATGAGCCTTGTGGAAAACAATGTATCCCCTCCATTGGTCACAGGACTCTACTGACTTCCCTCCAAAGGATAT  1696

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1697  CTGAAGATTCTCTGCCCACAAAACCCAGTGGTCTGATGAAGGACTGCAAACCACAGCTCTTGTGTTTTTTGCAC  1770

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1771  CATGGGTTTTAAAATCCGTCCTCTGCCTCCCACAAGGAGCTACTACCCAAGGGAAGGGAGAAGATTAATTGGTG  1844

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1845  ACCTTTCGCCGTGTTAAAATAGGATGAGTATGTTGCTGGTCAAGGCAGAAACGCTAACTTCCAACTGTGGTCTG  1918

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1919  TTAAGAGATCTGCTGGGAACCTTCAGAAGCACTGCCTTCCAAGGCGGGGCCACAGCTTGGGGTGTTCAGCACTT  1992

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 1993  GAGGACGGGTGGAGCTTGTTCAACCCAAAGATGTGTGCGATGAACGGATCTACACACTGGAAATACGTATCAAA  2066

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2067  ACTGCAACAGCAAAATCATATTTTGTAAATTAAAATTGTGTTTACTTACTGTGACTACTGTTCAGTCTTTATTC  2140

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2141  AGAAACCTTTTTATAGGCTTTCTTAGCAAAAAAAAAATCCATATCTATGGATAATGTCTCAATCTTCTGTATAT  2214

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2215  ATGTTTTATTAATATGTAAATATTTAGATTTTTTAAAATTACTATGTTCTTTAAAAAAGAATTCAATGCAAGCC  2288

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct 2289  TGGTTGTGAAAATGGTGTATAACATTGTGTTGTGGTATCAATTCCCAAGATGCTCTTTATGTCTGATCTGGAAG  2362

Query 1096  -------------------------  1095
                                     
Sbjct 2363  AATACAATAAATTACTTTAATTGAA  2387

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