Nucleotide Global Alignment
Description
- Query:
- TRCN0000478485
- Subject:
- XR_930472.1
- Aligned Length:
- 5907
- Identities:
- 1035
- Gaps:
- 4837
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAATGGGGAGGCCAAAGAGACACAGCCCATTTTTTTAGGAGATGAAAGCATGGAAATAAAAAAGCAAATTACAG 74
Query 1 --ATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGATGAGAAGATTGCTGAACGACAGCACTGGGCGGATCTATCAGCGAGTTGGCAAAGAAGGAGAGAAACTAAAA 148
Query 73 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAAGAGCCCCAGGACCTGGATTTAGTCTGGCCTCCACGTTTGAACTCCTCTGCTGAGGCCCCGCAAAGCCTCCA 222
Query 147 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCCGTCTTCACGTGGTGTGTGGAATGAGCTACCGCCCCAGAGTGGACAGTTCTCAGGGCAGTATGGCACCCGTT 296
Query 221 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTAGAACCTTCCAAAGCCAGCCCCACCCTACCACGAGCTCCAATGGTATGGTTGTCAACAAACATTCAGAAGGC 370
Query 295 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCATGGGGGAGAACTTCCAGTGGTGAATTCATCAGCTGGATCAAACTGCTGTACTTGTAACTGCCAGTCAAC 444
Query 369 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTGCAGGCCATTCTACAAGAACTCAAGACCATGAGGAAATTAATGCAAATTCAAGCAGTTGGAACTCAAAACA 518
Query 443 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAACAACCTCCAATTTCCCTTATATGCTCCCAGCGAACTGCTGTCTCACGAAAGAGAAATAAAAAGAAAAAA 592
Query 517 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGCCCCCAAAGACTGTGGAACCTCTTACTGTGAAACAGAAGCCCAGTGGGTCAGAGATGGAGAAAAAGTCGGT 666
Query 591 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGTGGCCTCTGAGCTATCTGCTCTCCAGGCAGCCGAGCACACCTCCCCGGAGGAGAGCCGCGTTCTAGGATTCG 740
Query 665 GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCATTGTTCTGGAATCACCTTCCTCAGATCCAGAAGTACAACTTGCTGAAGGCTTTGACGTGTTTATGCCTAAA 814
Query 739 TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCTCAGCTGGACTCTATATTGTCAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCGTT 888
Query 813 TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTTGATGACAAGACTTTGGCTAACTCCTTACCCAATGGGAAGAGGAAAAGAGGACTCAATGACAACCGGAAAG 962
Query 887 GACTAGACCAAAATATTGTGGGTGCAATAAAAG-----TCTT-------------CACAG--AAAAGTACTG-- 938
||||||||||||||||||||||||||||||||| .||| .|||| |.|..|.|||
Sbjct 963 GACTAGACCAAAATATTGTGGGTGCAATAAAAGATGCCCCTTGGAGCAGCAGCCCTACAGTCAGAGCTCCTGAG 1036
Query 939 ---TACAGC--TAAC---------CATGTG------------GATAAGCTTCCTGGCCC---------AAGAGA 977
.||||| |||| |.||.| |||.||..|| |.|| |||.||
Sbjct 1037 TCCAACAGCAATAACAGGTATCAACCTGAGTTTAACAGCAATGATGAGTATC---GACCAGAGTCCAAAAGCGA 1107
Query 978 T--TGGGTGCAGATTCTACAGGATCAA----ATT---AAACTGGCCAGAAGAAGGTTAAAAA---GAGGCTCAG 1039
| ||||| ||||| |.| |.||| ||.||.||.||..|| .||.||.|.
Sbjct 1108 TGATGGGT--------------ATCAACCCGAGTCCAACACT-----GATGATGGGTATCAACCCAAGTCTAAC 1162
Query 1040 AG-----------ATCG--------CGGACAGTGATGA-------------------AAGACTG--GACGGCAT 1073
|| |||| |..|||.|||||| ||.|||| ||||| ||
Sbjct 1163 AGCGATGATGGGTATCGACCCGAGTCCAACACTGATGACGGGTATCGACCTGAGCCCAACACTGATGACGG-AT 1235
Query 1074 TGCTCTACC----ACCAACAGTGGTC------------------------------------------------ 1095
.||.||| .|||||||.|.|.
Sbjct 1236 --ATCGACCGGAGTCCAACAGCGATGACGGGTATCGACCCGAGTCCAACAGCGATGACGGGTATCGACCCGAGT 1307
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1308 CCAACAGCGGTGACGGGTATCGACCCGAGTCCAACAGCGGTGACGGGTATCAACCCGAGTCCAACAGCGGTGAC 1381
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1382 GGGTATCGACCCGAGTCCAACAGCGGTGACGGGTATCGGCCCCGAGTGTAACAGTGATGACGGGTATTGACCCG 1455
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1456 AGTCTAACAGTGATGACAGATATCGGCCCCGAGTCTAACAGTCATGACAGATATCAGCCCCGAGTCTAACAGTC 1529
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1530 ATGAGGAATATCGACCCCAAATCTAACAGTCATGACGGATATCGACCCCAAATTTAACAGCGATGATGGATATC 1603
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1604 GACCCCGCATCTAACAGCGATGACGGGTATCAGCCCCGAGTCCAACGGCGATGATGGGTGTCGACCCCGAGTCT 1677
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1678 AACAGCGATGACGGATGTCGGCCCCGAGTCTAACAGCGATGATGGATATTGACCCGAAATCTAACAGCGATGAC 1751
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1752 AGATGTTGGCCACAAGTCTAACAGCGATGATGGATATCGGCCCTGAGTCTAACAGCAATGACAGGTATCGGCCC 1825
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1826 TGTGTCTAACAGTGATGATGGGTATCGACCCCAAATCTAAGAGCGATAATGGATATCAGCCCCGAGTTTAACAG 1899
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1900 CAATGACAGATATCAGCCCTGAGTCTAACTGTGATGACAAGTATTGGCCCCGAGTCTAACAGCGATGACAATAT 1973
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1974 TGGCCCTGAGTCTAACAGTGATCACAGGTATCGGCCCTGAGTGTAACAGCAATGACGAGTATCAACCCCAAGTC 2047
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2048 TAACAGCGATGATGGGTATCAACCCCGAGTCTAACAGTGATGATGGATATCAGCCCTGAGTGTAACAACAATGA 2121
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2122 TGAGTATCACCCCCAAGTCTAAGAGCGATGATGGGTATCAACCCCGAGTCTAATAGTGATGATGGGTATCGACC 2195
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2196 CCAAATCTAACAGTGATGACAGATGTCGGCCCCGAGTCCAACAGCGATGATGGATACCAGCCCCAAGTCTCACA 2269
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2270 GCGATGACGAATCGGCCCTGAGTCTAACAGCGATGACAGGTATTGGCCCCGAGTCTAACAGCGATGACAATATT 2343
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2344 GGCCCTAACAGTGATGACAGGTATTGGCCCTGAGTGTAACAGCAATGATGAGTATCAACCCCAAGTCTAACAGC 2417
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2418 GATGACAGATATCAACCCCGAGTCTAACAGTGATGATGGGTATCGACCCCAAATCTGACAGTGATGACGGATGT 2491
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2492 CGGCCCCGAGTCCAACAGCGATGATGGATACCAGCCCCAAGTCTCACAGCGATGACGATATCGGCCCTGAGTCT 2565
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2566 AACAGCGATGACGGATACCATCCCCGAGTCTAACAGCGATGACGGATACCAGCCCCAAGTCTCACAGCGATGAC 2639
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2640 GATATCGGCCCTGAGTCTAACAGCGATGACAGATATCGGCCCTGAGTCTAACAGTGATGACGAGTATTGGCCCC 2713
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2714 GAGTCTAACAGCGATGATGATATTGGTCCTGAGTCTAAGAGAGATGACAGGTATCAACCCCAAGTCTAATAGTG 2787
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2788 ATGATGGTTATTGACCCCAAATCTAACAACGATGATGGATATCAGTCCCTACTCTTAATAGCGATGATGGATAT 2861
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2862 CAGCCTGAGTCTAACAGTGATGACAGATATCGGCCCTGAGTGTAACAGCGATGACGAGTATCAACCCCGAGTCT 2935
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2936 AAGAGCAATGACGGGTATCGACCCTGAGTCTAACAGTGATGACAGATATTGGCCCTGAGTGTAACAGTGATGAT 3009
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3010 GAGTATCAACCCCGAGTCTAAGAGTGATGATGGGTATCGACCCCGAGTCTAACAGTGATGACGGGTATCAACCC 3083
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3084 CGAGTCTAACAGCGATGACGAGTATCAACCCCGAGTCTAAGAGCAATGACGGATATTGACCCTGAGTCTAACAG 3157
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3158 TGATGACAGATATTGGCCCTGAGTGTAACAGCGATGAGTATCAACCCTGAGTCTAAGAGCGATGATGGGTATCG 3231
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3232 ACCCTGAGTCTAACAGTGATGATGGGTATCGACCCCGAGTCTAAGAGCGATGACGGGTATCAATCCCAAGTCTT 3305
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3306 AACAGTGATGACGGGTATCAACCCCAAATCTAACAGTGATGACGGATATCGGCCCCAAGTCCAACAGCGATGAC 3379
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3380 GGGTACCAGCCCCAAGTCTAACAATGATGACGATATCAGCCCCGAGTCTAACAGCAATGACGGGTATTGACCCC 3453
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3454 AAATCTAACAGCGATGACAGATATCAGCCCCGAGTTTAACAGTGATGACAGATATCGGCCCTGAGTCTAACAGT 3527
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3528 GATGACGAGTATTGGCCCTGAGTCTAACAGCAATGATGATGTTGGCCCTGAGTCTAAGAGAGATGACGGGTATC 3601
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3602 AACCCCAAGTCTAATAGTGATGATGGGTATTGACCCCAAATCTAACAACGATGATGGATATCAGCCCCTACTCT 3675
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3676 AATAGCGATGATGGATATCAGCCCTGAGTCTAAGAGTGATGACAGGTATCGGCCCTGAGTGTAACAGCGATGAC 3749
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3750 GAGTATCAACCCCGAGTCTAAGAGCGATGATGGGTATCAACCCCAAGTCTAACAGTGATGACGGGTATCGACCC 3823
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3824 CGAGTCTAACAGTGATGACGGGTATCGACCCCGAGTCTAACAGTGATGACGGGTATCGACCCCGAGTCTAACAG 3897
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3898 TGGTGACGGGTATCGACCCCGAGTCTAACAGTGATGAAGGGTATTGACCCCGAGTCTAACAGTGATGATGATAT 3971
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3972 CGACCCCGAGTCTAACAGTGATGACGGGTATCGGCCTCAAGTCTAACAGTGATGATGGGTATTGACCCCAATTC 4045
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4046 TAATAGCGATGATGGGGATGGTGGGTATCAACTGTACACACAACAGCCCCTGTGAAGCTTGGGCTCCTTCAGCT 4119
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4120 GTTTCTGTCAAGCACCTGGTTTTCTGAAGGTGGCTCCACCTCTGTCCTGGAATCAGTGAGAAGGAAGGTAGCCT 4193
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4194 TGTCTGAGCTGCCCTCATTCTTTGAACCTTGGGGGTTTAAAACTTTTTTTGTGTTATGTGACACAAGGGTCCTG 4267
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4268 GTTTCAGACATGGCTACAGTGCCTCACCAGGACTAGACAGAATAGCTGCCCACTTCACCAAGGTGGAAGAAGGC 4341
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4342 ATTTCCAGACTCTAGCACAGATCTCACTTACGGATCACTAAACAAATACCATTTCATTTTCCTTACAACCTTGT 4415
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4416 CATGACAGTCTTGAAGAAAATGTAGAATCTCTTCTTGGCATTGGCTAAAGTCCCCTTGATTGCATATTTGAAAC 4489
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4490 ACTTGTTCAGTTGACATTTCCCCAAACAGTGTGTTAACAGAAGACATGATCTTTGCTGCTTTTCAGATACTGGA 4563
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4564 TTAAGTCATGAGAACACCAGAATCTTTGCAGTATTTTCGTTGATATTATAAACCTAGAAATCATCAGCAGGCAT 4637
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4638 GAAATTTCTGCTAACAACATATTTATTACCCCAAGCCAATGACTGACTAAGGCCCTGATGTTCAGAAATGTACA 4711
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4712 GTCTAGTAAGACATGTCAGCGATGACCCCTAACAGAGCCATGCTCCAGGACAGAATAAAATAAATGACAAATGT 4785
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4786 CTATTACCTGGCAGGGGGAGGAGGAAGCACAGAGGATGTAAATCTCACTAGGAGAAGACCTCACAGAATAGATG 4859
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4860 ACATCTGAACTAGGCCTTGAATGAAGAGAAGTATATCAAATGCCGAGAGAATGGAAAAGGTTAACTACAGAACA 4933
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 4934 TGTTTAATGAAGCTTAAATTCAATAAAACATTGGGTGAAAGCCTTTTGCCTCCAGAACTGCTTAAGGCTCATGC 5007
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5008 TCATTGGTGGACCTTAAGTCCTCAGCAACTTGTTTACCTTAACACATTTGACTTCATGAATATAATGCCAGTGA 5081
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5082 AATGGACTCAGATATAGTTTACCTCCAAACGTTTTCAGCCAGAACTGTGCTGCTTAAAGTTGCTTCTGAAAGCT 5155
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5156 ACCTCGGCCCCATCCCACACCTTATGAATTCGGATCCCTGCCGTTGGGGCCACAGTGAGTCTACGCTTCACCAC 5229
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5230 CGCTTCATCACCGGCCTTCCATAAGCTCAAAAAAGGGATCTCATCTCCTCAAAACTGTGAATTCATATGTTTAC 5303
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5304 TACATAAGGAGCAAATGGAAATGTGGAGAAACTTGTTAAGAAGGGTGTGGCTTTTTTTGATCTTTCTTCAGCCT 5377
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5378 GTCACATAATGGGCAGGAACCAGTTGTGGATTCACTTGCAAGGATTCCACTCCAACTCCCCGTTACTGAATTCT 5451
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5452 TACAAAACCTGCATTTTAACACCACCACTAGGGGTGACAAAAACAGCCTCCTGTCAAAAGAGATATGTTTCTGG 5525
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5526 AGCATAAACAGGGCCACTACAGTAGAATGTGCATTGCACACCATTGTGGGCACTGTTGCCGTTGTGGACACTGT 5599
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5600 CGATTTGTATATTTATTGTGACAGTTTCCCTGCAGCCTAAAGTACAGTGTCTTGAGGAAAGACACCTTTCTAAT 5673
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5674 CTGAACAATGGCTCCATATGTGCCAGCTGTGGCCCTGAAAATAGAAAGCAGTGTTTTCTGCGTGGTCCATCTCT 5747
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 5748 TCTTTATTTAACTCCCTGAATTGTGTGGCTCATCAGAGATGCTCACCAGCATCCTAAGTCTTCACAGAAAAGTA 5821
Query 1096 ------------------------------------------------------------- 1095
Sbjct 5822 CTGTACAGCTAACCATGTGGATAAGCTTCCTGGCCCAAGAGATTGGGTACAGATTCTACAG 5882
