Nucleotide Global Alignment
Description
- Query:
- TRCN0000478570
- Subject:
- XM_011246575.2
- Aligned Length:
- 1585
- Identities:
- 1099
- Gaps:
- 284
Alignment
Query 1 ATGCGGGGGAGCCCGGGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAGCTGGACAGTAACAA 74
|||||||||.||.|..|||||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||
Sbjct 1 ATGCGGGGGGGCTCAAGCGACGCGGAGCGGCGGCAGCGCTGGGGTCGCCTGTTCGAGGAACTAGACAGCAACAA 74
Query 75 GGATGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGCGGGGGCAACCCAGACCCCGGCG 148
|||.|||||||||||||||||||||||||||||||||||||||||||||||..||||..|.||.|||| |.|
Sbjct 75 GGACGGCCGCGTGGACGTGCACGAGTTGCGCCAGGGGCTGGCCAGGCTGGGAAGGGGAGATCCGGACC---GTG 145
Query 149 CCCAACAGGGTATCTCCTCTGAGGGTGATGCTGACCCAGATGGCGGGCTCGACCTGGAGGAATTTTCCCGCTAT 222
|.||.||||||.||||||||||..|.||||||||.||.|||||.||.|||..|||||||||.|||.|.|||||.
Sbjct 146 CACAGCAGGGTGTCTCCTCTGACTGGGATGCTGATCCTGATGGTGGCCTCAGCCTGGAGGAGTTTACTCGCTAC 219
Query 223 CTGCAGGAGCGGGAACAGCGTCTGCTGCTCATGTTTCACAGTCTTGACCGGAACCAGGATGGTCACATTGATGT 296
||||||||.|||||.|||||.||.|||||||||||||||||.||||||||||||||.|||||||||||.|||||
Sbjct 220 CTGCAGGAACGGGAGCAGCGCCTTCTGCTCATGTTTCACAGCCTTGACCGGAACCAAGATGGTCACATAGATGT 293
Query 297 CTCTGAGATCCAACAGAGTTTCCGAGCTCTGGGCATTTCCATCTCGCTGGAGCAGGCTGAGAAAATTTTGCACA 370
|||||||||.||||||||.||||||||.||.||.||.||||||||.||||||||.||.||||||||..|.||||
Sbjct 294 CTCTGAGATTCAACAGAGCTTCCGAGCACTAGGTATCTCCATCTCACTGGAGCAAGCAGAGAAAATCCTACACA 367
Query 371 GCATGGACCGAGACGGCACAATGACCATTGACTGGCAAGAATGGCGCGACCACTTCCTGTTGCATTCGCTGGAA 444
||||||||||.||.|||||.|||||||||||.|||||.||||||||.||||||||.||||||||.||.|||||.
Sbjct 368 GCATGGACCGCGATGGCACCATGACCATTGATTGGCAGGAATGGCGAGACCACTTTCTGTTGCACTCTCTGGAG 441
Query 445 AATGTGGAGGACGTGCTGTATTTCTGGAAGCATTCCACGCTCTCTTCTGCTGGGTTCTCTGCCTGGATAAAAGA 518
||.||||||||.||.||||||||||||||||||||.||
Sbjct 442 AACGTGGAGGATGTCCTGTATTTCTGGAAGCATTCTAC------------------------------------ 479
Query 519 TTCTACGGCTGAACAGAATCGTTCAAAAACCACGGTCTTGGCCAGGCGCAGTGGCTCACACCTGAAATCCCAGC 592
Sbjct 480 -------------------------------------------------------------------------- 479
Query 593 ACTTTGGGAGGCCGAAGTGGGCGGATCACGAGGTCCTGGACATTGGCGAGTGCCTGACAGTGCCGGACGAGTTC 666
.|||||||||||.||.||.||||||||.|||||.||.||||||
Sbjct 480 -------------------------------AGTCCTGGACATCGGTGAATGCCTGACGGTGCCTGATGAGTTC 522
Query 667 TCAAAGCAAGAGAAGCTGACGGGCATGTGGTGGAAACAGCTGGTGGCCGGCGCAGTGGCAGGTGCCGTGTCACG 740
||..||.|||||||.||.||.||.|||||||||||||||||||||||.||.||||||||.||.||.||||||||
Sbjct 523 TCCCAGGAAGAGAAACTTACAGGAATGTGGTGGAAACAGCTGGTGGCTGGTGCAGTGGCTGGCGCTGTGTCACG 596
Query 741 GACAGGCACGGCCCCTCTGGACCGCCTCAAGGTCTTCATGCAGGTCCATGCCTCAAAGACCAACCGGCTGAACA 814
|||||||||.||.|||||||||||.||||||||.||||||||||||||.|||||||||.||||||||||.||||
Sbjct 597 GACAGGCACAGCTCCTCTGGACCGACTCAAGGTATTCATGCAGGTCCACGCCTCAAAGTCCAACCGGCTTAACA 670
Query 815 TCCTTGGGGGGCTTCGAAGCATGGTCCTTGAGGGAGGCATCCGCTCCCTGTGGCGCGGCAATGGTATTAATGTA 888
|.||.|||||.||..|||.||||.|.|..||.||.||..||...|||||.|||||.|||||.||.||.||.||.
Sbjct 671 TTCTAGGGGGCCTGAGAAACATGATTCAAGAAGGGGGTGTCTTGTCCCTCTGGCGGGGCAACGGCATCAACGTG 744
Query 889 CTCAAGATTGCCCCCGAGTCAGCTATCAAGTTCATGGCCTATGAACAGATCAAGAGGGCCATCCTGGGGCAGCA 962
||||||||.|||||||||||.||.|||||.||||||||.|||||||||||||||.|||||||||.||||||.||
Sbjct 745 CTCAAGATAGCCCCCGAGTCTGCCATCAAATTCATGGCTTATGAACAGATCAAGCGGGCCATCCGGGGGCAACA 818
Query 963 GGAGACACTGCATGTGCAGGAGCGCTTCGTGGCTGGCTCCCTGGCTGGTGCCACAGCCCAAACCATCATTTACC 1036
||||||||||||.||.||||||||||||||||||||.||||||||.||.||||||||.|||||||||||.||||
Sbjct 819 GGAGACACTGCACGTTCAGGAGCGCTTCGTGGCTGGTTCCCTGGCCGGGGCCACAGCTCAAACCATCATATACC 892
Query 1037 CTATGGAGGTG---------------------------------------CTGAAGACGCGGCTGACCTTGCGC 1071
|.||||||||| ||.|||||.||||||||..|.|||
Sbjct 893 CCATGGAGGTGAGAAGGAGGGGCTGGAGGAAGATCCAGCATGGGAGGGTACTAAAGACTCGGCTGACTCTACGC 966
Query 1072 CGGACGGGCCAGTATAAGGGGCTGCTGGACTGCGCCAGGCGTATCCTGGAGAGGGAGGGGCCCCGTGCCTTCTA 1145
.|.||.|||||.||.||||||||.|||||.||.||.|.|||.|||.|.||..|.||.||||||||.||||||||
Sbjct 967 AGAACTGGCCAATACAAGGGGCTCCTGGATTGTGCAAAGCGGATCTTAGAACGTGAAGGGCCCCGCGCCTTCTA 1040
Query 1146 CCGCGGCTACCTCCCCAACGTGCTGGGCATCATCCCCTATGCGGGCATCGACCTGGCCGTCTACGAGACTCTGA 1219
|||.||||||||.||.||.|||||||||||||||||||||||.||.||||||||.||.|||||||||||.||||
Sbjct 1041 CCGTGGCTACCTGCCTAATGTGCTGGGCATCATCCCCTATGCAGGAATCGACCTAGCTGTCTACGAGACCCTGA 1114
Query 1220 AGAACTGGTGGCTTCAGCAGTACAGCCACGACTCGGCAGACCCAGGCATCCTCGTGCTCCTGGCCTGCGGTACC 1293
||||..|.|||||||||||||||||||||||.||.||..||||||||||.|||||||||||.|.|||.||.|||
Sbjct 1115 AGAATCGCTGGCTTCAGCAGTACAGCCACGAATCCGCTAACCCAGGCATTCTCGTGCTCCTAGGCTGTGGCACC 1188
Query 1294 ATATCCAGCACCTGCGGCCAGATAGCCAGTTACCCGCTGGCCCTGGTCCGGACCCGCATGCAGGCACAAG---- 1363
||.|||||||||||.||||||||.|||||||||||.|||||.||||||||.|||||.||||||||.||||
Sbjct 1189 ATCTCCAGCACCTGTGGCCAGATTGCCAGTTACCCTCTGGCACTGGTCCGTACCCGAATGCAGGCCCAAGCCTC 1262
Query 1364 ---------------GCTGGAGTACA--GTGGCTCGATTT---CAGATCACTG---CA--------------AC 1400
||.||..|.|| ||||.||.|.|| ||.||| ||| || .|
Sbjct 1263 CATTGAGGGTGGCCCGCAGGTCTCCATGGTGGGTCTACTTCGACACATC-CTGTCCCAGGAGGGTGTATGGGGC 1335
Query 1401 CTCT------GCCTT----CCAGGTTCAAGCGATTC--TCCTGCC-TCAGC--CTCC-----------AGAG-- 1446
|||| ||.|| |||..||||.|....|| |||.||| |.||| |||| .|||
Sbjct 1336 CTCTACCGGGGCATTGCCCCCAACTTCATGAAGGTCATTCCAGCCGTGAGCATCTCCTACGTGGTCTACGAGAA 1409
Query 1447 ------------------------------- 1446
Sbjct 1410 CATGAAGCAGGCTCTGGGGGTCACATCCAGG 1440