Nucleotide Global Alignment

Description

Query:
TRCN0000478777
Subject:
NM_199446.2
Aligned Length:
3265
Identities:
2880
Gaps:
17

Alignment

Query    1  ATGGCCTGCTCACCTGATGCAGTCGTCTCTCCGTCTTCCGCTTTCTTAAGGTCTGGCTCAGTTTATGAACCTCT  74
            ||||||..||||||||||||||.|.|||||   ||..|.|||||.|||||||||||||||||||||||||||||
Sbjct    1  ATGGCCAACTCACCTGATGCAGCCTTCTCT---TCACCTGCTTTGTTAAGGTCTGGCTCAGTTTATGAACCTCT  71

Query   75  TAAAAGCATTAATCTTCCAAGACCTGATAATGAAACTCTCTGGGATAAGTTGGACCATTATTACAGAATTGTCA  148
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||
Sbjct   72  TAAAAGCATTAATCTTCCAAGACCTGATAATGAAACTCTATGGGATAAGTTGGATCATTATTACAGAATTGTCA  145

Query  149  AGTCAACATTGCTGCTGTATCAAAGTCCAACTACCGGTCTCTTTCCCACTAAAACATGCGGTGGTGACCAGAAG  222
            |||||||..|||||.|||||||||||||||||||||||||||||||.|||||||||||.|||||.||..|||||
Sbjct  146  AGTCAACGATGCTGATGTATCAAAGTCCAACTACCGGTCTCTTTCCTACTAAAACATGTGGTGGAGAAGAGAAG  219

Query  223  GCCAAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTGGGCTTTGGCTCTTGCATACAGGCGAATTGATGA  296
            .||||..|.||.||.||.||.|||||.|||||.||.||||||||.|||||.||.|||||||||||.||||||||
Sbjct  220  TCCAAAGTGCACGAGAGTCTGTACTGTGCTGCGGGTGCCTGGGCCTTGGCGCTAGCATACAGGCGCATTGATGA  293

Query  297  CGACAAGGGAAGGACCCATGAGCTGGAGCACTCAGCTATAAAATGCATGAGAGGAATTCTCTACTGCTATATGC  370
            .|||||||||.||||||||||||||||||||||.||.|||||.||.|||||||||||||||||||||||.||||
Sbjct  294  TGACAAGGGACGGACCCATGAGCTGGAGCACTCGGCCATAAAGTGTATGAGAGGAATTCTCTACTGCTACATGC  367

Query  371  GTCAGGCCGATAAGGTCCAGCAGTTTAAGCAGGATCCACGCCCAACAACATGTCTTCACTCTGTTTTCAATGTG  444
            |.|||||.|||||||||||.||||||||.||.|||||.||.||.|||||||||||||||||||||||||.||||
Sbjct  368  GGCAGGCTGATAAGGTCCAACAGTTTAAACAAGATCCCCGGCCCACAACATGTCTTCACTCTGTTTTCAGTGTG  441

Query  445  CATACAGGAGATGAGTTGCTTTCCTATGAGGAATATGGTCATCTTCAGATAAATGCAGTGTCACTTTATCTCCT  518
            ||.||.||.|||||||||||...||||||.||||||||.||||||||||||||||||||.|||||.|.||||||
Sbjct  442  CACACTGGGGATGAGTTGCTCAGCTATGAAGAATATGGCCATCTTCAGATAAATGCAGTCTCACTCTTTCTCCT  515

Query  519  TTACCTTGTGGAAATGATTTCCTCAGGACTCCAGATTATCTACAACACTGATGAGGTCTCTTTTATTCAAAACC  592
            ||||||.||.|||||||||||||||||.||||||||.|||||.|||||.||||||||.||||||||||||||||
Sbjct  516  TTACCTGGTAGAAATGATTTCCTCAGGCCTCCAGATAATCTATAACACGGATGAGGTTTCTTTTATTCAAAACC  589

Query  593  TTGTATTTTGTGTGGAAAGAGTTTACCGTGTGCCTGACTTTGGTGTCTGGGAAAGAGGAAGCAAATATAATAAT  666
            |||||||||||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct  590  TTGTATTTTGTGTAGAGAGAGTTTACCGTGTTCCTGACTTTGGTGTCTGGGAAAGAGGAAGCAAATATAACAAT  663

Query  667  GGCAGCACAGAGCTACATTCGAGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAGCAATTAATGGATTCAACCT  740
            ||.||.||.||.||.||.||.|||||.||||||||||||||||||||..|||||||||||||||||||.|||||
Sbjct  664  GGTAGTACCGAACTGCACTCAAGCTCTGTTGGTTTAGCAAAAGCAGCCTTAGAAGCAATTAATGGATTTAACCT  737

Query  741  TTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTT  814
            .|||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||.|
Sbjct  738  CTTTGGAAACCAGGGGTGTTCCTGGTCAGTTATATTTGTGGATCTCGATGCTCACAACCGCAACAGGCAGACAT  811

Query  815  TGTGCTCGCTGTTACCCAGAGAATCAAGATCACATAATACAGATGATGGCCTGCTCACCTGCATCAGTTATCCT  888
            |||||||.||||||||||||||||||.|.||.|||||.|||||||.||.|||||||.|.|||||||||||.|||
Sbjct  812  TGTGCTCACTGTTACCCAGAGAATCACGCTCTCATAACACAGATGCTGCCCTGCTCCCGTGCATCAGTTACCCT  885

Query  889  GCATTTGCCCTGGATGATGAAGTTCTTTTTAGCCAGACACTTGATAAAGTGGTTAGAAAATTAAAAGGAAAATA  962
            ||.||||||.||||||||||||..||.||.|||||||||||||||||||||.|.||||||||.|||||||||||
Sbjct  886  GCGTTTGCCTTGGATGATGAAGCACTGTTCAGCCAGACACTTGATAAAGTGATAAGAAAATTGAAAGGAAAATA  959

Query  963  TGGATTTAAACGTTTCTTGAGAGATGGGTATAGAACATCATTGGAAGATCCCAACAGATGCTACTACAAGCCAG  1036
            |||||||||.|||||||||.||||||||||.|||||..||||||||||||||||||||.||||.|||||.||||
Sbjct  960  TGGATTTAAGCGTTTCTTGCGAGATGGGTACAGAACGCCATTGGAAGATCCCAACAGACGCTATTACAAACCAG  1033

Query 1037  CTGAAATTAAGCTATTTGATGGCATTGAATGTGAATTTCCCATATTTTTCCTTTATATGATGATTGATGGAGTT  1110
            |.||.||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||
Sbjct 1034  CAGAGATTAAGCTGTTTGATGGCATTGAATGTGAATTTCCCATATTCTTCCTTTACATGATGATCGATGGTGTT  1107

Query 1111  TTTAGAGGCAATCCTAAGCAAGTACAGGAATATCAGGATCTTTTGACTCCAGTACTTCATCATACCACAGAAGG  1184
            |||||||||||||.|.|.|||||..|||||||||||||.||||||||.||..|.||||||||.|||||||||||
Sbjct 1108  TTTAGAGGCAATCTTGAACAAGTCAAGGAATATCAGGACCTTTTGACACCTTTGCTTCATCAGACCACAGAAGG  1181

Query 1185  ATATCCTGTTGTACCAAAGTACTATTATGTGCCAGCTGACTTTGTAGAATATGAAAAAAATAACCCTGGTAGTC  1258
            ||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||..|||||||||||||
Sbjct 1182  ATATCCTGTTGTGCCAAAGTACTATTATGTGCCAGCTGACTTTGTAGAATGTGAAAAAAGAAACCCTGGTAGTC  1255

Query 1259  AAAAACGATTTCCTAGCAACTGTGGCCGTGATGGAAAACTGTTTCTTTGGGGACAAGCACTTTATATCATCGCA  1332
            |.||.||.|||||.||.|||||||||||||||||.||..|||||||||||||||||||.|||||||||||.|||
Sbjct 1256  AGAAGCGGTTTCCAAGTAACTGTGGCCGTGATGGGAAGTTGTTTCTTTGGGGACAAGCTCTTTATATCATTGCA  1329

Query 1333  AAACTCCTGGCTGATGAACTTATTAGTCCTAAAGACATTGATCCTGTCCAGCGCTATGTCCCACTAAAGGATCA  1406
            ||||||||.||||||||..|.||.||.||||||||||||||.|||||||||||||.|||||||||..||.||||
Sbjct 1330  AAACTCCTAGCTGATGAGTTAATCAGCCCTAAAGACATTGACCCTGTCCAGCGCTTTGTCCCACTTCAGAATCA  1403

Query 1407  ACGTAACGTGAGCATGAGGTTTTCCAATCAGGGCCCACTGGAAAATGACTTGGTAGTTCATGTGGCACTTATAG  1480
            ||||||||||||||||||.|..||||||||||||||||||||||||||||||||.||||||||.||||||.|||
Sbjct 1404  ACGTAACGTGAGCATGAGATACTCCAATCAGGGCCCACTGGAAAATGACTTGGTGGTTCATGTAGCACTTGTAG  1477

Query 1481  CAGAAAGCCAAAGACTTCAAGTTTTTCTGAACACATATGGTATTCAAACTCAAACTCCTCAACAAGTAGAACCC  1554
            |||||||||||.|.||||||||||||||.||.|||||||||||||||||.|||||||||||.||.||.||||||
Sbjct 1478  CAGAAAGCCAACGCCTTCAAGTTTTTCTCAATACATATGGTATTCAAACCCAAACTCCTCAGCAGGTGGAACCC  1551

Query 1555  ATTCAGATATGGCCTCAGCAGGAGCTTGTGAAAGCTTATTTGCAGCTGGGTATCAATGAAAAGTTAGGACTCTC  1628
            ||||||||.||||||||||||||||||||.|||||||||||.||.|||||.||||||||||||||.||.||.||
Sbjct 1552  ATTCAGATCTGGCCTCAGCAGGAGCTTGTAAAAGCTTATTTCCACCTGGGAATCAATGAAAAGTTGGGTCTGTC  1625

Query 1629  TGGAAGGCCAGACAGGCCCATTGGCTGCCTCGGGACATCAAAGATTTATCGCATTCTAGGAAAGACTGTGGTTT  1702
            ||||||||||||.|||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1626  TGGAAGGCCAGATAGGCCCATTGGCTGCCTTGGTACATCAAAGATTTATCGCATTCTAGGAAAGACTGTGGTTT  1699

Query 1703  GTTACCCGATTATTTTCGACCTAAGTGATTTCTACATGTCTCAGGATGTTTTCCTGCTGATAGATGACATAAAG  1776
            |||||||.||.||.||.|||||.|||||||||||||||||||||||.|||.|.|||||.|||||||||||||||
Sbjct 1700  GTTACCCTATCATCTTTGACCTGAGTGATTTCTACATGTCTCAGGACGTTCTGCTGCTCATAGATGACATAAAG  1773

Query 1777  AATGCGCTGCAGTTCATTAAACAATATTGGAAAATGCATGGACGTCCACTTTTCCTTGTTCTCATCCGGGAAGA  1850
            ||.||.||.|||||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||.|||||
Sbjct 1774  AACGCACTACAGTTCATTAAGCAATATTGGAAAATGCATGGACGCCCACTTTTTCTTGTTCTCATCCGAGAAGA  1847

Query 1851  CAATATAAGAGGTAGCCGGTTCAACCCCATATTAGATATGCTGGCAGCCCTTAAAAAAGGAATAATTGGAGGAG  1924
            |||.||||||||||||.|.||||||||.||||||||.||||||||||||.|||||||.||||||||||||||||
Sbjct 1848  CAACATAAGAGGTAGCAGATTCAACCCAATATTAGACATGCTGGCAGCCTTTAAAAAGGGAATAATTGGAGGAG  1921

Query 1925  TCAAAGTTCATGTGGATCGTCTACAGACACTAATATCTGGAGCTGTGGTAGAACAACTTGATTTCCTACGAATC  1998
            |||||||||||||.||||||.||||||||.|.|||||.||||||||.|||||.||.|||||.||.||||||||.
Sbjct 1922  TCAAAGTTCATGTTGATCGTTTACAGACATTGATATCCGGAGCTGTAGTAGAGCAGCTTGACTTTCTACGAATT  1995

Query 1999  AGTGACACAGAAGAGCTTCCAGAATTTAAGAGTTTTGAGGAACTAGAACCTCCCAAACATTCAAAAGTCAAACG  2072
            ||||||||||||.|||||||||||||||||||.|||||.|||||||||..|||.||.|||||||||||||||||
Sbjct 1996  AGTGACACAGAAAAGCTTCCAGAATTTAAGAGCTTTGAAGAACTAGAATTTCCTAAGCATTCAAAAGTCAAACG  2069

Query 2073  GCAAAGCAGCACCCCTAG-TGCTCCTGAACTGGG----ACAGCAGCCGGATGTCAACATTAGTGAATGGAAGGA  2141
            |||.|||||.|||.| || |||||||||    ||    |||..||||.|...|||.|||||..||.|||||..|
Sbjct 2070  GCAGAGCAGTACCGC-AGATGCTCCTGA----GGCGCAACACGAGCCAGGCATCACCATTACCGAGTGGAAAAA  2138

Query 2142  CAAACCCACCCATGAAATTCTTCAAAAACTGAATGATTGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGGTA  2215
            ||||.|||||||.|||||.|||||.||.||||||||.|||.|||||||||||.|.|||.|||||||||||||||
Sbjct 2139  CAAATCCACCCACGAAATCCTTCAGAAGCTGAATGACTGCGGTTGTCTGGCTGGTCAAACCATCCTGCTGGGTA  2212

Query 2216  TACTGCTCAAAAGAGAAGGCCCCAACTTCATCACAAAGGAAGGTACCGTTTCTGATCACATTGAGAGAGTCTAT  2289
            ||||||||||||||||.|||||.|||||.|||||||.||||||.||.||.||||||||||||||||||||.|||
Sbjct 2213  TACTGCTCAAAAGAGAGGGCCCTAACTTTATCACAATGGAAGGAACTGTGTCTGATCACATTGAGAGAGTGTAT  2286

Query 2290  AGAAGAGCTGGCAGCCAAAAACTTTGGTCGGTTGTACGCCGTGCAGCAAGTCTTTTAAGTAAAGTAGTGGACAG  2363
            |||||||||||||||.||||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 2287  AGAAGAGCTGGCAGCAAAAAGCTTTGGTCGGTTGTACGCCGTGCAGCAAGTCTTTTAAATAAAGTAGTGGACAG  2360

Query 2364  CCTGGCCCCATCCATTACTAATGTTTTAGTGCAGGGCAAACAGGTAACTCTGGGTGCCTTTGGGCATGAAGAAG  2437
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|
Sbjct 2361  CCTGGCCCCATCCATTACTAATGTTTTAGTGCAGGGCAAACAGGTAACTCTAGGTGCCTTTGGACATGAAGAGG  2434

Query 2438  AAGTTATCTCTAATCCTTTGTCTCCAAGAGTGATTCAAAACATCATCTATTATAAGTGTAACACCCATGATGAG  2511
            |.||.||||||||.||..|||||||||||||||||.|.|||||.||||||||||||||.||.|||||.||||||
Sbjct 2435  AGGTCATCTCTAACCCACTGTCTCCAAGAGTGATTAAGAACATAATCTATTATAAGTGCAATACCCACGATGAG  2508

Query 2512  AGGGAAGCGGTCATTCAGCAAGAACTGGTCATCCATATTGGCTGGATCATCTCCAATAACCCTGAGTTATTCAG  2585
            |||||.||.||||||||||||||||||||||||||.||.|||||||||||||||||.|.|||||||||.|||||
Sbjct 2509  AGGGAGGCAGTCATTCAGCAAGAACTGGTCATCCACATCGGCTGGATCATCTCCAACAGCCCTGAGTTGTTCAG  2582

Query 2586  TGGCATGCTGAAAATACGAATCGGGTGGATCATCCATGCCATGGAGTATGAACTTCAGATCCGTGGCGGAGACA  2659
            .|||||||||||||||||.||.||||||||||||||.|||||||||||||||||.|||.||||.|||||.||.|
Sbjct 2583  CGGCATGCTGAAAATACGCATTGGGTGGATCATCCACGCCATGGAGTATGAACTGCAGGTCCGGGGCGGGGATA  2656

Query 2660  AGCCAGCCTTGGACTTGTATCAGCTGTCACCTAGTGAAGTTAAACAGCTTCTGCTGGATATTCTGCAGCCTCAA  2733
            |||||||..||||||||||.|||||.||.||.||||||||.||.|||||.|||||.||.|||||.|||||||||
Sbjct 2657  AGCCAGCTGTGGACTTGTACCAGCTCTCGCCCAGTGAAGTGAAGCAGCTGCTGCTAGACATTCTCCAGCCTCAA  2730

Query 2734  CAGAATGGAAGATGTTGGCTGAACAGGCGTCAGATCGATGGGTCTTTGAATAGAACTCCCACCGG-GTTCTATG  2806
            ||||.|||||||||||||.||||.||.||||||||.||||||||.|||||||||||.||| |||| .|||||||
Sbjct 2731  CAGAGTGGAAGATGTTGGTTGAATAGACGTCAGATTGATGGGTCATTGAATAGAACACCC-CCGGAATTCTATG  2803

Query 2807  ACCGAGTGTGGCAGATTCTGGAGCGCACGCCCAATGGGATCATTGTTGCTGGGAAGCATTTGCCTCAGCAACCA  2880
            ||||||||||||||||.|||||.|||||.||.|||||.|||.||||.|||||.|||||||||||.|||||||||
Sbjct 2804  ACCGAGTGTGGCAGATCCTGGAACGCACACCTAATGGTATCGTTGTAGCTGGAAAGCATTTGCCACAGCAACCA  2877

Query 2881  ACCCTGTCAGATATGACCATGTATGAGATGAATTTCTCTCTCCTTGTTGAAGACACGTTGGGAAATATTGACCA  2954
            ||..||||.||||||||||||||||||||||||||.|||||||||||||||||.|.|.|||||||.||||||||
Sbjct 2878  ACTTTGTCGGATATGACCATGTATGAGATGAATTTTTCTCTCCTTGTTGAAGATATGCTGGGAAACATTGACCA  2951

Query 2955  GCCACAGTACAGACAGATCGTTGTAGAGTTACTTATGGTTGTATCCATTGTACTGGAAAGAAACCCCGAGCTAG  3028
            ||||.||||.|||||||||.|.||.||||||||.|||||.|||||||||||.||||||||||||||.||.||.|
Sbjct 2952  GCCAAAGTATAGACAGATCATAGTTGAGTTACTAATGGTCGTATCCATTGTGCTGGAAAGAAACCCTGAACTGG  3025

Query 3029  AATTTCAAGACAAAGTAGATCTAGACAGACTGGTCAAAGAAGCATTTAATGAATTTCAAAAAGATCAGAGTCGG  3102
            |.||||||||||||||.|||||.|||||||||||.||||||||.|||.||||.||||||||||||.||||||||
Sbjct 3026  AGTTTCAAGACAAAGTGGATCTGGACAGACTGGTTAAAGAAGCGTTTCATGAGTTTCAAAAAGATGAGAGTCGG  3099

Query 3103  CTAAAGGAAATTGAAAAACAAGATGACATGACTTCCTTTTACAACACTCCTCCCCTGGGAAAAAGAGGAACATG  3176
            |||||.|||||.||||||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||.||
Sbjct 3100  CTAAAAGAAATCGAAAAACAAGATGATATGACTTCCTTTTACAACACGCCCCCACTGGGAAAAAGAGGAACCTG  3173

Query 3177  CAGCTATTTGACAAAGGCGGTGATGAATCT-GCTGCTGGAAGGAGAAGTCAAGCCAAACAATGATGACCCGTGT  3249
            ||||||.|||||.||||..|||||||| || .|||||.||.||||||||||||||.|.||||||.|||.|.||.
Sbjct 3174  CAGCTACTTGACGAAGGTTGTGATGAA-CTCACTGCTCGAGGGAGAAGTCAAGCCCAGCAATGAGGACTCCTGC  3246

Query 3250  CTGATTAGC  3258
            |||.|||||
Sbjct 3247  CTGGTTAGC  3255

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.