Nucleotide Global Alignment
Description
- Query:
- TRCN0000478893
- Subject:
- NM_001172092.1
- Aligned Length:
- 2418
- Identities:
- 1384
- Gaps:
- 837
Alignment
Query 1 ATGGAGAGTCAGGGTGTGCCTCCCGGGCCTTATCGGGCCACCAAGCTGTGGAATGAAGTTACCACATCTTTTCG 74
||||||.|||||||||..||||..||.|||||.||||||||||||||||||||||||||.||||||||||||||
Sbjct 1 ATGGAGCGTCAGGGTGCTCCTCTTGGACCTTACCGGGCCACCAAGCTGTGGAATGAAGTAACCACATCTTTTCG 74
Query 75 AGCAGGAATGCCTCTAAGAAAACACAGACAACACTTTAAAAAATATGGCAATTGTTTCACAGCAGGAGAAGCAG 148
||.||||||||||.||||||||||.||||||||.||.|||||||||.|||||||||||||.||||..|||||..
Sbjct 75 AGTAGGAATGCCTTTAAGAAAACATAGACAACATTTAAAAAAATATAGCAATTGTTTCACTGCAGTTGAAGCTA 148
Query 149 TGGATTGGCTTTATGACCTATTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACAAGGCAACAGACTATCCAA 222
|.||||||||||||||.||.|||||||.||||||.|||||||||||||||||||||||.|||||||||||.|||
Sbjct 149 TAGATTGGCTTTATGATCTGTTAAGAAGTAATAGTAATTTTGGTCCTGAAGTTACAAGACAACAGACTATTCAA 222
Query 223 CTGTTGAGGAAATTTCTTAAGAATCATGTAATTGAAGATATCAAAGGGAGGTGGGGATCAGAAAATGTTGATGA 296
||.|||||.||||||||||||||||||||.|||||||||||||||||.||.||||||||.||||...|||||||
Sbjct 223 CTATTGAGAAAATTTCTTAAGAATCATGTGATTGAAGATATCAAAGGTAGATGGGGATCGGAAAGCCTTGATGA 296
Query 297 TAACAACCAGCTCTTCAGATTTCCTGCAACTTCGCCACTTAAAACTCTACCACGAAGGTATCCAGAATTGAGAA 370
.|||||.||.||.||||||||||||||||||||.||||||||||||.|.||||.|||..||.|||||.|.|..|
Sbjct 297 CAACAATCAACTATTCAGATTTCCTGCAACTTCTCCACTTAAAACTTTTCCACAAAGACATACAGAAATCAAGA 370
Query 371 AAAACAACATAGAGAACTTTTCCAAAGATAAAGATAGCATTTTTAAATTACGAAACTTATCTCGTAGAACTCCT 444
|||.|||||.||||.|||||||||||||.||||||.|.|||||||||||||||||||||||||..|.||||.||
Sbjct 371 AAACCAACACAGAGTACTTTTCCAAAGACAAAGATGGTATTTTTAAATTACGAAACTTATCTCAAAAAACTTCT 444
Query 445 AAAAGGCATGGATTACATTTATCTCAGGAAAATGGCGAGAAAATAAAGCATGA---AATAATCAATGAAGATCA 515
||.|.||.||||||||||||.||||||||||||...||.||.|||||.||||| |||||.|||||||||||.
Sbjct 445 AAGAAGCGTGGATTACATTTCTCTCAGGAAAATACAGAAAAGATAAATCATGAAAGAATAACCAATGAAGATCT 518
Query 516 AGAAAATGCAATTGATAATAGAGAACTAAGCCAGGAAGATGTTGAAGAAGTTTGGAGATATGTTATTCTGATCT 589
|||||.||||..|||.||...||||.||||||||||||||||||||||||||||||||||.||||||.||||.|
Sbjct 519 AGAAATTGCACCTGACAACCAAGAAATAAGCCAGGAAGATGTTGAAGAAGTTTGGAGATACGTTATTATGATAT 592
Query 590 ACCTGCAAACCATTTTAGGTGTGCCATCCCTAGAAGAAGTCATAAATCCAAAACAAGTAATTCCCCAATATATA 663
|||||||||||||||||.||.||||||||.||||||||.||.||||.|||||.|||||||||||.|||||||||
Sbjct 593 ACCTGCAAACCATTTTAAGTTTGCCATCCATAGAAGAACTCTTAAACCCAAACCAAGTAATTCCTCAATATATA 666
Query 664 ATGTACAACATGGCCAATACAAGTAAACGTGGAGTAGTTATACTACAAAACAAATCAGATGACCTCCCTCACTG 737
|||||||||||||||||.||||||||.|.||||||.||.|||||||||.||||||||||.||.||.||.||.||
Sbjct 667 ATGTACAACATGGCCAACACAAGTAAGCATGGAGTGGTCATACTACAAGACAAATCAGACGATCTTCCACATTG 740
Query 738 GGTATTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATATGAATAATCCAACTTATGTTGGAT 811
|||.||||||||.|||||||||||||||||||||||||||||.|||||.|..|||||||.||||||||||||||
Sbjct 741 GGTTTTATCTGCAATGAAGTGCCTAGCAAATTGGCCAAGAAGTAATGACACCAATAATCTAACTTATGTTGGAT 814
Query 812 TTGAACGAGATGTATTCAGAACAATCGCAGATTATTTTCTAGATCTCCCTGAACCTCTACTTACTTTTGAATAT 885
|||||||.||||||||||.||||||.|||||||||||||||.||||||||||||||||||||||.|||||||||
Sbjct 815 TTGAACGTGATGTATTCAAAACAATTGCAGATTATTTTCTAAATCTCCCTGAACCTCTACTTACATTTGAATAT 888
Query 886 TACGAATTATTTGTAAACATTTTGG------------------------------------------------- 910
||.|||||||||||.||||||||||
Sbjct 889 TATGAATTATTTGTGAACATTTTGGTTGTTTGTGGCTACATCACAGTTTCAGATAGAACAAGTGGAATACATAA 962
Query 911 -------------------------------------------------------------------------- 910
Sbjct 963 AATACAAGATGATCCACGATCTTCAAAAATCCATGATTTAAGCAATTTGAATTCCTTCAAATCAACTGAGTGTC 1036
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1037 TTCTTCTCAGTCTGCTTTACAAAGACAAAAGCAATGAAGAGTTGGATTCTACTAAAAGACTACAAAGAAATGAT 1110
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1111 CAAGGATTTCAAGAAAGATGTGCCAAGAAAATGCAGCTAGATAATTTAAGAAACAGAAGAGCTAGTGCTAATGA 1184
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1185 CATAATGGGAGGAAGCTGTCATAATTTAATAGGCTTAAGTAATACAAATGCCCTGTCCTCTAACATCAAACCAA 1258
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1259 GGTGCTCTTCTTTGGAAGGAATTGTAGATAGGCCAGTGAATTCAAGTGAAAAGAAGTCCAGTATCTTCTACCAG 1332
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1333 TCTGTTCTGAACATAGAAGAACAAAATAGTAAGCAATCGTTAGTGTCTGCACCCAAACAGACACCCCTATTTAA 1406
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1407 TCTTCACTCAGATGAAAATGCTCAGCAGCCACACTGTGTTGGTTTTAACAGAACCTCTGCTTTGACTGTTCAAG 1480
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1481 ACCAAGAAGAGTTATGTAATGAAAAGTATAAGTCAAAACAGCTTTGTAGATCTCAGAGTTTACTTTTAAGAAGT 1554
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1555 AGTACAAGACAGAATAGTTGTATCAATAAACCAGTGGCTGAAATTATAATGAAACCAAATGTTGGACAAGGGAG 1628
Query 911 -------------------------------------------------------------------------- 910
Sbjct 1629 TACAAGTGAGCTCGGAGAGTCTAGTACCACAATCAATAAAAGACTGTGCAAAAGCACCATAGAACTTTCAGAGA 1702
Query 911 ------------------------------------------GCTTGCTGCAACCTCATTTAGAGAGGGTTGCC 942
|.||||||||||||||.|||||||||||||||
Sbjct 1703 AATCTTTACCTCCAGCTGCTTCTGTGTTGACTGGCACACAAAGTTTGCTGCAACCTCACTTAGAGAGGGTTGCC 1776
Query 943 ATCGATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATCGTAGAAAGCTTCAACTTTTAATGCGTAT 1016
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 1777 ATCAATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATCGTAGAAAGCTTCAACTCTTAATGCGCAT 1850
Query 1017 GATTTCCCGAATGAGTCAAAATGTTGATATGCCCAAACTTCATGATGCAATGGGTACGAGGTCACTGATGATAC 1090
||||||..|||||||||||||||||||||||||||||||||||||...|||.|||||.||.|||.||||||||.
Sbjct 1851 GATTTCTAGAATGAGTCAAAATGTTGATATGCCCAAACTTCATGAACAAATAGGTACAAGATCATTGATGATAA 1924
Query 1091 ATACCTTTTCTCGATGTGTGTTATGCTGTGCTGAAGAAGTGGATCTTGATGAGCTTCTTGCTGGAAGATTAGTT 1164
||||.||||||||||||||..||||.||||||||||||||||||||||||||||||||.|||..||||||||||
Sbjct 1925 ATACTTTTTCTCGATGTGTACTATGTTGTGCTGAAGAAGTGGATCTTGATGAGCTTCTGGCTTCAAGATTAGTT 1998
Query 1165 TCTTTCTTAATGGATCATCATCAGGAAATTCTTCAAGTACCCTCTTACTTACAGACTGCAGTGGAAAAACATCT 1238
||||||.|||||||||||||||||||||||||||||||||||.||||.|||||..||||||||||.||||||||
Sbjct 1999 TCTTTCCTAATGGATCATCATCAGGAAATTCTTCAAGTACCCACTTATTTACAAGCTGCAGTGGAGAAACATCT 2072
Query 1239 TGACTACTTAAAAAAGGGACATATTGAAAATCCTGGAGATGGACTATTTGCTCCTTTGCCAACTTACTCATACT 1312
|||||||.|.||||||||..||.||.||||||.|||||||||||||.|||.||||||||||||.||.||.||||
Sbjct 2073 TGACTACATTAAAAAGGGCAATGTTAAAAATCATGGAGATGGACTAGTTGTTCCTTTGCCAACATATTCTTACT 2146
Query 1313 GTAAGCAGATTAGTGCTCAGGAGTTTGATGAGCAAAAAGTTTCTACCTCTCAAGCTGCAATTGCAGAACTTTTA 1386
||||.||||||||||||.|.||.||||||||.||.|||.||||.||.||.|||||||||||||||||||||||.
Sbjct 2147 GTAAACAGATTAGTGCTAAAGAATTTGATGAACAGAAAATTTCAACTTCCCAAGCTGCAATTGCAGAACTTTTG 2220
Query 1387 GAAAATATTATTAAAAACAGGAGTTTACCTCTAAAGGAGAAAAGAAAAAAACTAAAACAGTTTCAGAAGGAATA 1460
||.||||||.|.|.||..|..||.||..||||||||||||||||||.||||.|.||||||||||||||||||||
Sbjct 2221 GAGAATATTGTCAGAAGTAAAAGCTTGTCTCTAAAGGAGAAAAGAAGAAAATTGAAACAGTTTCAGAAGGAATA 2294
Query 1461 TCCTTTGATATATCAGAAAAGATTTCCAACCACGGAGAGTGAAGCAGCACTTTTTGGTGACAAACCTACAATCA 1534
.||.|||||||||||||||||||||||||||||.||||||||||||||||||||||.|||.|||||||||||||
Sbjct 2295 CCCCTTGATATATCAGAAAAGATTTCCAACCACTGAGAGTGAAGCAGCACTTTTTGATGATAAACCTACAATCA 2368
Query 1535 AGCAACCAATGCTGATTTTAAGAAAACCAAAGTTCCGTAGTCTAAGA--- 1581
|||||||.|||||||.|||||||||.||.|||.|.|..|||||..|.
Sbjct 2369 AGCAACCGATGCTGAATTTAAGAAACCCCAAGCTTCACAGTCTGCGTTAC 2418
