Nucleotide Global Alignment
Description
- Query:
- TRCN0000478908
- Subject:
- XR_001781082.1
- Aligned Length:
- 5904
- Identities:
- 968
- Gaps:
- 4845
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCCTGTGGGAAGGAAGGGCTGCAGCTCACAGCAACAGAGTTTAGACTGTCTTTGCTTCATCATCTGAAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAATTTTCCAGCCACGGCCGGCGGCTCGCAGAGTACAATAAACAGGGACGGAGAACTATTTGCATGGACCCCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCCTCATGATGCGGTGGAGAAGCCACGGCCACTCGGTCCTGCCAGATGTTCTTGGGGTTACTGTACATGGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGACGAGCAGAGCTAAACAAGAATTTAAAGAGGACGAAGGAAGGAAAGCGCCATCCTGCTCAAATACAAAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAAGAGGGTTGTTTTCCCACATCCTCCAAAGCTGTGAGCATTAGAACTAATATTTTCCCAAAGAGTGCCATCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TATTAAAGCCACTTTATTAAGGAGGGGTGTATCTGCAAAACAGTCAAGAGACTAGAACCCTGGGAGCCAGAGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACAGTGAGCACGCACTGCTTGTGGCTCACAGTCTTCCAGTGGGGCCTATCGATCGGTGACTGACTTCCTGCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGACACATTCCCCCTCCCCGGTTTCCTGGATTGGACTGCATTAAAGAATTCACTGCTTACCTTCAAACTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGTTGGAGTTTTCACGGCGGTTGTTTTGAGATCATTGAGACTCGGATTGATTTCGACATTTAACCGAAAGGAA 666
Query 1 -----------------------ATGGCTTTGAACGTTGCCCCAGTCAGAGATACAAAATGGCTGACATTAGAA 51
|||||.||||||||||||||.||.|||||.|||||.||||||||..|.||.
Sbjct 667 CAGAGCCCAAAGTAGTTCTCATCATGGCCTTGAACGTTGCCCCCGTGAGAGACACAAAGTGGCTGACGCTGGAG 740
Query 52 GTCTGCAGACAGTTTCAAAGAGGAACATGCTCACGCTCTGATGAAGAATGCAAATTTGCTCATCCCCCCAAAAG 125
|||||||||||||..||.||||||||.|||||||||||.||.|||||||||||.||||||||.|||||||||||
Sbjct 741 GTCTGCAGACAGTACCAGAGAGGAACGTGCTCACGCTCCGACGAAGAATGCAAGTTTGCTCACCCCCCCAAAAG 814
Query 126 TTGTCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTAAAGGGCCGTTGTTCGAGAGAGAACTGCA 199
|||.|||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||
Sbjct 815 TTGCCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTCAAGGGCCGCTGTTCAAGAGAGAACTGCA 888
Query 200 AGTATCTTCACCCTCCGACACACTTAAAAACTCAACTAGAAATTAATGGAAGGAACAATTTGATTCAGCAAAAA 273
|.||||||||.||||||||||||||||||||.||.|||||.||||||||.||||||||||||||.|||||||||
Sbjct 889 AATATCTTCATCCTCCGACACACTTAAAAACCCAGCTAGAGATTAATGGGAGGAACAATTTGATCCAGCAAAAA 962
Query 274 ACTGCAGCAGCAATGCTTGCCCAGCAGATGCAATTTATGTTTCCAGGAACACCACTTCATCCAGTGCCCACTTT 347
|||||||||||.||||||||||||||||||||||||||||||||||||||.||.||.|||||.|||||||||||
Sbjct 963 ACTGCAGCAGCGATGCTTGCCCAGCAGATGCAATTTATGTTTCCAGGAACGCCGCTCCATCCTGTGCCCACTTT 1036
Query 348 CCCTGTAGGTCCCGCGATAGGGACAAATACGGCTATTAGCTTTGCTCCTTACCTAGCACCTGTAACCCCTGGAG 421
.||||||||||||.|.||||||||||||.|||||||||||||||||||||||.||||.|||||.||||||||||
Sbjct 1037 TCCTGTAGGTCCCACCATAGGGACAAATGCGGCTATTAGCTTTGCTCCTTACTTAGCGCCTGTCACCCCTGGAG 1110
Query 422 TTGGGTTGGTCCCAACGGAAATTCTGCCCACCACGCCTGTTATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG 495
|||||||.||||||||.||..||||.|||||.||.||.||.|||||||||||||||||||||||||||||||||
Sbjct 1111 TTGGGTTAGTCCCAACAGAGGTTCTACCCACTACACCGGTCATTGTTCCCGGAAGTCCACCGGTCACTGTCCCG 1184
Query 496 GGCTCAACTGCAACTCAGAAACTTCTCAGGACTGACAAACTGGAGGTATGCAGGGAGTTCCAGCGAGGAAACTG 569
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCTCAACTGCAACTCAGAAACTTCTCAGGACTGATAAACTGGAGGTATGCAGGGAGTTCCAGCGAGGAAACTG 1258
Query 570 TGCCCGGGGAGAGACCGACTGCCGCTTTGCACACCCCGCAGACAGCACCATGATCGACACAAGTGACAACACCG 643
|||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||..||||||||||
Sbjct 1259 TGCCCGGGGAGAGACAGACTGCCGCTTTGCACACCCGGCAGACAGCACCATGATCGACACAAACGACAACACCG 1332
Query 644 TAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCAAATATTTTCACCCTCCTGCACAC 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATGAGGGAGAAATGCAAATATTTTCACCCTCCTGCACAC 1406
Query 718 TTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAAGCTGCGGTGGCCGCCCAGGCAGCCGCGGCCGC 791
|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 1407 TTGCAGGCCAAAATCAAAGCTGCGCAGCACCAAGCCAACCAGGCCGCGGTGGCCGCCCAGGCAGCCGCGGCCGC 1480
Query 792 GGCCACAGTCA------------------------------------------------------TGGCCTTTC 811
||||||||||| |||||||.|
Sbjct 1481 GGCCACAGTCATGACTCAGTCGACTGCCAAAGCACTGAAGCGACCTCTCGAAGCAACTGTAGACCTGGCCTTCC 1554
Query 812 CCCCTGGTGCTCTTCATCCTTTACCAAAGAGACAAGCACTTGAAAAAAGCAATGGTACCAGCGCGGTCTTTAAC 885
|.||.||||||||||||||.||||||||||||||||||||||||||||||||.||..|||||.|||||||.|||
Sbjct 1555 CTCCGGGTGCTCTTCATCCCTTACCAAAGAGACAAGCACTTGAAAAAAGCAACGGGGCCAGCACGGTCTTCAAC 1628
Query 886 CCCAGCGTCTTGCACTACCAGCAGGCTCTCACCAGCGCACAGTTGCAGCAACACGCCGCGTTCATTCCAACAGG 959
|||||||||||||||||||||||||||||.|||||.||.|||.|||||||.|||.|.||||||||.||.|||||
Sbjct 1629 CCCAGCGTCTTGCACTACCAGCAGGCTCTGACCAGTGCGCAGCTGCAGCAGCACACGGCGTTCATCCCCACAGG 1702
Query 960 GTCAGTTTTGTGCATGACACCCGCTACCAGTATT-----GTACC-----------------------CATGATG 1005
|||||||||||||||||||||||||||||||||| ||.|| .||||||
Sbjct 1703 GTCAGTTTTGTGCATGACACCCGCTACCAGTATTGGTAGGTTCCAACCTTTTTTTATTTGTCTTTTATATGATG 1776
Query 1006 CACAGCGCTACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACAAGTGTCCCCTTCGCAGCAACAGCCAC 1079
..||..| ||..||||||.| .|||.||.| || |||..||||
Sbjct 1777 TGCAATG------CCTTCACTGTTT-------------------GACATGTAT----TT--CAGAGACAG---- 1815
Query 1080 AGCCAATCAGATAAT---------------TCTGAAA------------------------------------- 1101
.|||.||| ||||||.
Sbjct 1816 -------TAGAGAATGCTTTAGGAAGTAGATCTGAAGGCTTAATAGCTTTAGAGTTAACGTGTAAGCTATGCTT 1882
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1883 GTGTATTTAAGAGAGTGATGGTTTTAATGTGACCTCTTAATGCTAGAACGATCACCACAGAGACGTGAAACCAC 1956
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1957 AAGTGCAAGTGTGCTTTTTAAAAAAAATGATTTGTGTTGTTTCTCTTTATAGTTTATCTGGTTTAGCATGAAGC 2030
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2031 AAGCAGAGGCAGGCTAATTTCATCAATGTTTTAAAGTTTCATAGTGGTGTGTGCCTTTACCTCCTCTTTGCTGT 2104
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2105 GTGTTAGAGTTATCAGAGTTTCCCAGAAGTATTTATTTTTGGAAAACAATTATACTTGGATGTGTTTTGAGACC 2178
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2179 AAGTGCCTGAACTACGCTACTTACTTCTCTTTTTAGAGGGCAGACTTATTTTTAATGGCTTTGGTTTTTTAGTT 2252
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2253 TTGTTTTTGCTTTGCTTATTTTTGTGCCTCCACGTCCATTCCCTTAGATGGGGAATTTTAACAGTGGGGTCTTC 2326
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2327 TCTCGAATTCAGGACCTTGGCACACAAGTCTGTCTTCAGGGCAGCTGATTCATTTCACTTACAAATTCAGAAAG 2400
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2401 TCACCACTGGCAAAAATGGATCTGGTTACTTCGTAGTAACCGCTCTAGAATTTACACCAAAGCCATTTCTCTTG 2474
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2475 CCTCACCTTTTAGTGACCGAAGTAAAACATGGAGCCACTGAAATTCCACCGTTCAGATATGCTTCCAAATTTAA 2548
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2549 GAGAAAAATGTTTTTTGGTTTAACCACAATTGATTCCAAAGTTCATCCTATTCTAAATTAGGCCCTCTGAGCCT 2622
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2623 GTGGCGTTTTGGAATTTATGATCAGTCCACTTGGTTCATTGGGTATTACCTATCATGTATTGAGAAGCAGCTGT 2696
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2697 AGCTATCTATGGTCATGATGCCATCCTCTGAATTGGGAATAGCTCTGTTTTGATCAAAGCGATGCGCTTTGGGC 2770
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2771 TCTCTGGGAATCACTGATTGTGTTTGAGAACTTCCTTTAACTGTACTTGTAATAAGCTATTTTCCCTTTTTATT 2844
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2845 TCTCTCCCATGCTCCCTTGCTTTGCACTGTGATCGCATGCCATCTGCTGGTTAACCCATGATGGCTTGCTGCTC 2918
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2919 TGATATTCACCATGCCAAATACCACTTCTATTACCATAATGCTACACCCTCCTGTTCATTGCTCCCATGGTTCC 2992
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2993 CCTCCTGAAAGTACCCATGATGCACAGCGCTACGTCCGCCACTGTCTCTGCAGCAACAACTCCTGCAACAAGTG 3066
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3067 TCCCCTTCGCAGCAACAGCCACAGCCAATCAGATAATTCTGAAATAATCAACAGAAATGGAATGGAATGCCAAG 3140
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3141 AATCTGCATTGAGAATAACTAAACATTGTTACTGTACATATTACCCCGTTTCCTCCTCAATAGAATTGCCACAA 3214
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3215 ACTGCATGCTAAATTTAGTTCTTCTGGACAGACCACAACCCTAAGGCTAGTTCTGCTATGTCATATATGAGTAT 3288
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3289 TAAATATGGTATGCTTAGTATACTCCAGCCTAAGATAGTTAACCACCTGAGACCAGCTGTGATGTTCGAAGACA 3362
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3363 TACAGGATGAGGTTTTCTTTCACAGGGTTCTGAGCATAGTTTCTGTCCCAGGAATATTGTCTTATCTCCATAAC 3436
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3437 TATAGCTGATGCAGAAAGTCCAGACAATATACTCATTTCGACTCAGAATATTTCAAATTTAGCAATAAACAGTT 3510
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3511 AGCTTTAGTTTTAAGTACCTATTCCAAGGGCAGGTTCGATTGTAACTCCAATCACAACCATTTCATTTCCTGAC 3584
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3585 TGGATCGAAGGGTATGATTCACTTCTTGAGGAGACGGACAGTCGCAGCAGAGAGAAGTGAAGTAAAACATACGC 3658
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3659 CTGCCTCGCAGGTCTAAAGTCTGAGTGGCAGCTCAAGCACAATTGCCAGGGGACACATCAGAGTGTGGGGTTCG 3732
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3733 CTTTGCCAGGAGATGCCGCACTGAATCATGGGATTCTAGAATAACATTGCATAGATTGAAAAAAAAAAAAAAAC 3806
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3807 TTTGCACGGTATGAGCTTCATACCCAACCCAACAAAGTCTTGAAGGTATTATTTTACAAGTATATTTTTAAAGT 3880
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3881 TGTTTTATAAGAGAGACTTTGTAGAAGTGCCTAGATTTTGCCAGACTTCATCCAGCTTGACAAGAATGAAAGGC 3954
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3955 TCATGCCAATAGTCGAATCTAAGGGATTGGTCTTTCAAACTCGCCCTCCGGTTGCCTGTTACCGAATAACTCTT 4028
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4029 CTAAACTAAAACCTAGTCAAACAGGGAAGCTGTAGGTGAGGAGGTCTGTATAATATTCCAGTTTAAGTACGTCT 4102
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4103 GAGTTTAGTCACTACAGATGCAAACTGTGACTTTAATCTAAATTACTATGTAAACGAAAAAAAAAAGTAGATAG 4176
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4177 TTTCACTTTTTAAAAACTCCATTACTGTTTTTGCATTTTAAGAGTTGGATTAAAGGGTTGTAAGTAACTGCAGC 4250
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4251 ATGGAAAAATAGTTCTTTTAATTCTTTCACCTTAAAGCATATTTTATGTCTCAAAAGTATAAAAAACTTTAATA 4324
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4325 CAAGTACACACATATTATATATACACATACATATATATACTATATATGGATGAAACATATTTTAATGTTGTTTA 4398
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4399 CTTTTTTTAAATACTTGGTTGATCTTCAAGGTAATAGCGATACAATTAAATTTTGTTCAGAAAGTTTGTTTTAA 4472
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4473 AGTTTATTTTAAGCACTATCGTACCAAATATTTCATATTTCACATTTTATATGTTGCACATAGCCTACACAGTA 4546
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4547 CCTACATAGTTTTTAAATTATTGTTTAAGAAATGAAACAGCTGTTATAAATGGATATTATGTGTAATTGTTTAA 4620
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4621 AACATCCATTTTCTTTGTGAACATTTTAGTGATTGAAGTATTTTGACTTTTGAGATTGAATGTAAAATATTTTA 4694
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4695 AATTTTGGTATCATCGCCTGTTCTGAAAACTAGAGGCATCCAACCATATCATTTTTTTTGATTGAAAAAAGATC 4768
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4769 TGCATTTAATTCATGTTGGTCAAAGTCTAATTACTATTTATCTTACATCATAGATCTGATAACTGTATCGAAAA 4842
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4843 GAGAAATCACATTCTGAGTGTAATCTTGCATAGTGCTTGTGTCGTGTTTGTTTTTAATTTGTGGAAAGGTATTG 4916
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4917 TATCTAACTTGTATCACCTTGATAGTTCTCATCTTTATGTATTATTGATATTTGTAATTTCCTCAGCTATAACA 4990
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4991 ATGTAGTTACGCTACAACTTGCCTAAAACACTCATACTTTTTTTTTTCTTTACTTACTCATTTAAACTCATTGA 5064
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5065 GAAGATAGTAGACTAAAAAGGTAAATTATGGGAATCACTGAAATATTTTTGTAGACTAATTGTTGTAACTGTCC 5138
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5139 TTTCTTCCTTTCATTTCATGATTTTTATTTTAAAAATTATTAGCACATAGCTATTTTCAGCCCTTTAATAACTG 5212
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5213 ATCATCAAAACATCACCTGTATCCCCCAGCCAATATAGATGACTGTATTTTTTACTATGATATCCATTTTCCAG 5286
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5287 AATTGTGATTATAATATGCAGAGTCAAATATGCCATTTACAATAAGGAGGAGGCCAGGCAAATGCATAGATGTA 5360
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5361 CAAATATATGTACAACAGATTTTGCTTTTTATTTATTTATAATGTAATTTTATAGAATAATTCTGGGATTTGAG 5434
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5435 AGGATCTAAAACTATTTTTCTGTATAAATATTATTTGCCAAAAGTTTGTTTATATTCAGAAGTCTGACTATGAT 5508
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5509 GGATAAATCTTAAATGCTTTGTTTAATTACAAAAACAAAATCACCAATATCCAAGACAGGAAGATCTCAGTTCA 5582
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5583 ACAGCTCCGGTAGTTAGGGAACTAACTCCACTTGCACAGGACTTCATTTCACTCTTGGTTTTCAGGCTATAACA 5656
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5657 GCACTTCACAGAACTATTCTTTCAGCCATACACCACTGGTCACATTTCTACTAAATCTTTCTGTAACACTTCTT 5730
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5731 AAAGAATTCCCTCATTCGTTATCTTACAGTGTAAACAGGACTCTAATTTGTATCAATTATATGTTTTGGTTGTA 5804
Query 1102 ---------------------------------------------------------- 1101
Sbjct 5805 ATATTCAGTTCACTCACCCAATGTACAACCAATGAAATAAAAGAAGCATTTAAAAGGA 5862
