Nucleotide Global Alignment
Description
- Query:
- TRCN0000478925
- Subject:
- XM_017315111.1
- Aligned Length:
- 3804
- Identities:
- 452
- Gaps:
- 3300
Alignment
Query 1 ATGCCAATCGTGATGGCCCGGGACCTGGAGGAAACAGCATCATCCTCAGAGGATGAGGAGGTCATAAGTCAAGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGATCATCCATGCATCATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTACAAAGGACAACAATATTAGAGTAATTGGAGAACGTTATCATTTGTCTTATAAGATTGTACGAACGGACAGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CGCCTAGTACGCAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCTAAT 296
||
Sbjct 1 ------------------------------------------------------------------------AT 2
Query 297 GTGGACAGGATCCCACCTGAAGCCCTTCTTACTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTTCCCA 370
||||||||||||||||||.||.||.||||||||.||.||||||||||||||||||||.||||||||.||.||||
Sbjct 3 GTGGACAGGATCCCACCTAAAACCGTTCTTACTTCGAACCCTCTCTGAAGCACAAAAGGTTAATCATTTCCCCA 76
Query 371 GGTCTTATGAACTTACCCGGAAGGACCGACTGTACAAAAACATTATTCGAATGCAGCATACACATGGATTCAAG 444
|||||||||||||.|||||.|||||||||||||||||||||||.|||||.||||||||.||.|||||||||||.
Sbjct 77 GGTCTTATGAACTAACCCGCAAGGACCGACTGTACAAAAACATCATTCGGATGCAGCACACTCATGGATTCAAA 150
Query 445 GCTTTTCACATCCTCCCCCAGACCTTCCTCCTGCCAGCTGAGTACGCGGAATTTTGTAATTCATATTCGAAGGA 518
||.||.|||||||||||.||||||||.|||||||||||||||||.||.|||||.||||||||||||||.|||||
Sbjct 151 GCATTCCACATCCTCCCTCAGACCTTTCTCCTGCCAGCTGAGTATGCAGAATTCTGTAATTCATATTCAAAGGA 224
Query 519 CCGGGGACCTTGGATAGTAAAACCAGTGGCATCTTCAAGGGGGCGGGGCGTCTACCTGATCAACAATCCAAACC 592
|||.||||||||||||||||||||||||||.|||||.||||||||||||||||||.||||||||||.|||||||
Sbjct 225 CCGAGGACCTTGGATAGTAAAACCAGTGGCCTCTTCTAGGGGGCGGGGCGTCTACTTGATCAACAACCCAAACC 298
Query 593 AGATCTCCCTGGAAGACAACATTTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTT 666
||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 AGATCTCCCTGGAAGAGAACATCTTGGTCTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTT 372
Query 667 GACATGCGCCTCTATGTGCTCGTGACTTCCTATGATCCTCTTGTCATCTATCTCTATGAAGAAGGATTGGCTAG 740
|||.||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.|||||||
Sbjct 373 GACGTGCGCCTCTATGTGCTCGTGACTTCCTATGATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGCTAG 446
Query 741 AAAATGCAATTGGAAGATGGGAAAT-ACCATGGATAAAAGAA----GGCTACCTATTTATG------------T 797
...|||||.|| ||.|..|| |.||.||.|..||||| .||.|||..||.||| |
Sbjct 447 -GTTTGCAACTG-----TGCGTTATGATCAAGGCTCCAAGAACATCCGCAACCAGTTCATGCACCTGACGAACT 514
Query 798 ACAGGTGCTT---------------------------------------------------------------- 807
||| ||.|
Sbjct 515 ACA---GCGTGAACAAGAAGAGTGGAGACTATGTGAGTTGTGATGACCCAGAAGTGGAGGATTATGGGAACAAG 585
Query 808 -------------------------------------------------------------------------- 807
Sbjct 586 TGGAGCATGAGTGCCATGCTTAGGTACCTGAAACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGTGGA 659
Query 808 -------------------------------------------------------------------------- 807
Sbjct 660 AGACCTGATCATTAAGACAATAATCTCTGCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCACACC 733
Query 808 -------------------------------------------------------------------------- 807
Sbjct 734 GCAGCAGTTGTTTTGAACTGTATGGCTTTGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAAGTG 807
Query 808 -------------------------------------------------------------------------- 807
Sbjct 808 AATCTCTCTCCTTCTTTGGCCTGTGATGCTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACATGTT 881
Query 808 -------------------------------------------------------------------------- 807
Sbjct 882 CACTGTTGTAGGATTTGTGTGCCAAGATCCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTGAGT 955
Query 808 -------------------------------------------------------------------------- 807
Sbjct 956 CTTCCAGGCGGAACCCTTTTCAGAAACCTCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAAAAC 1029
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1030 CTTGTGGCCTCAGCCCGGGAGAAGGTACCGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGAGAT 1103
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1104 CAAAGTTCTCCGGAGGGTAAAGGAGGAGAATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGGAGA 1177
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1178 CATGGGAAATATATGGGTCCTACCTTGAACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTATTCCAG 1251
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1252 GACAGAGGAAACCCCAGAAGGAGCTTGCTGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACCAGAGCTAAA 1325
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1326 GGTGGAGAGCATGAACTCCAAGGCCAAGCTGCATGCCGCTCTCTATGAGAGGAAGCTACTGTCTCTGGAGGTGC 1399
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1400 GAAAACGTAGACGACGGAGTGGCAGATTGAGGGCAATGAGGCCAAAATACCCAGTGATTGCCCAACCAGCTGAA 1473
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1474 ATGAATATTAAAACCGAGACAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGACAATGACGATGAAGAGCAGGA 1547
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1548 AGCATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAGTACACACCTTCATTGACTGTTATAG 1621
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1622 TAGAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGACTAATAAAGGTGAACCGTGCTGCAAAATC 1695
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1696 GAGGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGATTCTCCAGGACAATGGCAATCTAAGCAAAGTACA 1769
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1770 GGCCCGGTTAGCATTCTCTGCCTATCTTCAGCATGTGCAAATCCGTCTGACAAAAGACAGTGGTGGTCAGACAC 1843
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1844 TCAGTCCCAGCTGGGCTGCCAAAGAGGATGAACAGATGGAACTGGTGGTTCGTTTTCTCAAGCGAGCGTCAAGT 1917
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1918 AACCTCCAGCACTCGCTGAGGATGGTATTGCCTAGTCGGCGGTTGGCACTTCTGGAGCGCAGGAGAATCCTTGC 1991
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1992 CCACCAGCTAGGAGACTTTATCGGTGTGTACAACAAGGAAACAGAACAAATGGCTGAAAAGAAATCAAAGAAGA 2065
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2066 AACTTGAAGAAGAGGAAGAAGATGGGGTGAACGCAGAAAGCTTTCAGGAGTTTATTCGACAAGCAAGTGAGGCT 2139
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2140 GAACTGGAGGAGGTGTTGACTTTTTATACCCAAAAAAACAAGTCTGCCAGTGTCTTCCTGGGGACTCACTCGAA 2213
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2214 AAGCTCTAAGAACAGCAGTAGTTACTCTGATAGTGGGGCAAAAGGTGATCACCCTGAGACCATACAAGAAGTGA 2287
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2288 AAATAAAGCAACCCAAACAGCAACAGGCAACAGAAATCCACGCCGATAAATTATCTCGATTTACCACTTCATCA 2361
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2362 GGAAAAGAGGCGAAACTAGTGTATACCAATTGCTCTTCTTTCTGCAGTCCTGCTGCTGTTCTTCTGCAGAGACT 2435
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2436 CCCCAGCTCCCATCTGTCGTCCGTGATCACAACCTCTGCCCTCTCGGCAGGCCCTGGCCACCATGCTTCTCTAT 2509
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2510 CTCAAATCCCTCCAGCTGTCCCCAGCCTGCCTCACCAGCCAGCACTGCTACTGAGCCCCGTTCCTGACAATGCC 2583
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2584 CCTCCCTCCATACACTCTGGAACCCAGAATGTAAGCCCTGCGGGGCTGCCACGCTGTCGATCCGGCAGCTACAC 2657
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2658 CATTGGCCCCTTTTCCTCTTTCCAAAGTGCCGCACATATCTATAGCCAGAAACTGTCTCGTCCCTCCTCAGCAA 2731
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2732 AGGCAGCAGGGTCATGTCATCCACACAAGCATCATTCAGGAATTGCCAAAACACAAAAAGAGGGTGAAGATGTT 2805
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2806 TCATTAAACAGGAGGTACAACCAAAGTCTGGTTACGGCTGAACTCCAGCGGCTCGCGGAGAAGCAGGCAGCCAG 2879
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2880 GCAGTATTCTCCAGCCAGTCACATCAGTCTCCTCACTCAGCAGGTGACAAACCTGAATTTGGCCAGCAGTGTCA 2953
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2954 TAAACAGAAGCAGTGCATCCACCCCCCCTACCCTTCGGCCTGTCATCAGTCCTAGTGGCCCAACGTGGTCTATA 3027
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3028 CAGCCAGACCTCCACGCTTCTGAGACCCACTCCAGCCCCCCTGGAAGCAGGAGCCTCCAGACAGGTGGCTTTGC 3101
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3102 CTGGGAGGGCGAGGTAGAGAACAACGCATACAGCAAGACTACAGGGGTGGTCCCCCAGCACAAGTACCACCCCA 3175
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3176 CAGCAGGCAGCTACCAGCTCCACTTTGCTCTCCAGCAACTCGAGCAACAAAAACTTCAGTCCCGGCAACTTCTG 3249
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3250 GACCAGAGTCGAGCCCGGCACCAGGCAATCTTTGGCAGCCAGACACTACCTAACTCCAGTTTATGGACAATGAA 3323
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3324 TAATGGTCCAGGCTGCAGAATTTCAAGTGCCACAACTGGTGGCCAGAAGCCAAACACCCTGCCACAAAAAGTAG 3397
Query 808 -------------------------------------------------------------------------- 807
Sbjct 3398 TGGCACCTCCAAATTCATCCACCTTGGTCTCCAAGCCTGCATCCAATCACAAGCAAGTGCTCAGAAAGCCGGCA 3471
Query 808 ------------------------------ 807
Sbjct 3472 TCCCAGAGGGCTTCCAAACCCTGCTCACAC 3501
