Nucleotide Global Alignment
Description
- Query:
- TRCN0000478925
- Subject:
- XR_001780460.1
- Aligned Length:
- 2877
- Identities:
- 716
- Gaps:
- 2082
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGGCGCCTGCGCAGTGGCTCTTAGCGGGCGGTTGCTTGTTGGTTGTTGTAGTAACGGGGGAAGCAGCCTTCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCTGCGTTGATTCGGGCTGGGGAAGGAGGAGGGAGGTGAAGCAGAGCGTGGTCCCCGCCTGCCGGCCCCGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTGAGAAGATGAGACAGGAGTCTGTGCCATCCAAATTGTTTGATCCAGTGAGACTGCAAGGAAGAAAGGTCT 222
Query 1 -------------------------------------------ATGCCAATCGTGATGGCCCGGGACCTGGAGG 31
||||||.|.||||||||||||||||||||||
Sbjct 223 CTGAGGCCTCTGTGTGCTGACTGTATGACAGACCCCAAAGGAGATGCCAGTTGTGATGGCCCGGGACCTGGAGG 296
Query 32 AAACAGCATCATCCTCAGAGGATGAGGA---GGTCATAAGTCAAGAGGATCATCCATGCATCATGTGGACTGGA 102
|.||||||||.|||||||||||.||||| ||.| |..|||||||||||.|||||.||.||||||||||||
Sbjct 297 AGACAGCATCGTCCTCAGAGGACGAGGACCTGGCC---AACCAAGAGGATCACCCATGTATTATGTGGACTGGA 367
Query 103 GGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATTCTTACAAAGGACAACAATATTAGAGTAAT 176
||||||||||||||||||||||||||.||||||||.||.||||||.|.||||||||||||||||||.|||||||
Sbjct 368 GGCTGCAGGAGAATTCCAGTTTTGGTTTTCCATGCTGAGGCTATTTTGACAAAGGACAACAATATTCGAGTAAT 441
Query 177 TGGAGAACGTTATCATTTGTCTTATAAGATTGTACGAACGGACAGTCGCCTAGTACGCAGCATTCTGACAGCCC 250
||||||.||||||||||||||||||||||||||..||||||||||||||||.||.||.||||||||||||||||
Sbjct 442 TGGAGAGCGTTATCATTTGTCTTATAAGATTGTGAGAACGGACAGTCGCCTGGTGCGAAGCATTCTGACAGCCC 515
Query 251 ATGGATTTCATGAAGTTCACCCAAGCAGCACTGACTATAACCTAATGTGGACAGGATCCCACCTGAAGCCCTTC 324
||||||||||||||||||||||.|||||||||||||||||..|.||||||||||||||||||||.||.||.|||
Sbjct 516 ATGGATTTCATGAAGTTCACCCGAGCAGCACTGACTATAATTTGATGTGGACAGGATCCCACCTAAAACCGTTC 589
Query 325 TTACTGCGCACCCTCTCTGAAGCACAAAAAGTTAATCACTTTCCCAGGTCTTATGAACTTACCCGGAAGGACCG 398
|||||.||.||||||||||||||||||||.||||||||.||.|||||||||||||||||.|||||.||||||||
Sbjct 590 TTACTTCGAACCCTCTCTGAAGCACAAAAGGTTAATCATTTCCCCAGGTCTTATGAACTAACCCGCAAGGACCG 663
Query 399 ACTGTACAAAAACATTATTCGAATGCAGCATACACATGGATTCAAGGCTTTTCACATCCTCCCCCAGACCTTCC 472
|||||||||||||||.|||||.||||||||.||.|||||||||||.||.||.|||||||||||.||||||||.|
Sbjct 664 ACTGTACAAAAACATCATTCGGATGCAGCACACTCATGGATTCAAAGCATTCCACATCCTCCCTCAGACCTTTC 737
Query 473 TCCTGCCAGCTGAGTACGCGGAATTTTGTAATTCATATTCGAAGGACCGGGGACCTTGGATAGTAAAACCAGTG 546
||||||||||||||||.||.|||||.||||||||||||||.||||||||.||||||||||||||||||||||||
Sbjct 738 TCCTGCCAGCTGAGTATGCAGAATTCTGTAATTCATATTCAAAGGACCGAGGACCTTGGATAGTAAAACCAGTG 811
Query 547 GCATCTTCAAGGGGGCGGGGCGTCTACCTGATCAACAATCCAAACCAGATCTCCCTGGAAGACAACATTTTGGT 620
||.|||||.||||||||||||||||||.||||||||||.|||||||||||||||||||||||.|||||.|||||
Sbjct 812 GCCTCTTCTAGGGGGCGGGGCGTCTACTTGATCAACAACCCAAACCAGATCTCCCTGGAAGAGAACATCTTGGT 885
Query 621 CTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTTGACATGCGCCTCTATGTGCTCGTGACTT 694
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 886 CTCCCGTTACATTAACAACCCCCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCTCTATGTGCTCGTGACTT 959
Query 695 CCTATGATCCTCTTGTCATCTATCTCTATGAAGAAGGATTGGCTAGAAAATGCAATTGGAAGATGGGAAAT-AC 767
||||||||||.||||||||||||||||||||.||||||.||||||| ...|||||.|| ||.|..|| |.
Sbjct 960 CCTATGATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGCTAG-GTTTGCAACTG-----TGCGTTATGAT 1027
Query 768 CATGGATAAAAGAA----GGCTACCTATTTATG------------TACAGGTGCTT------------------ 807
||.||.|..||||| .||.|||..||.||| |||| ||.|
Sbjct 1028 CAAGGCTCCAAGAACATCCGCAACCAGTTCATGCACCTGACGAACTACA---GCGTGAACAAGAAGAGTGGAGA 1098
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1099 CTATGTGAGTTGTGATGACCCAGAAGTGGAGGATTATGGGAACAAGTGGAGCATGAGTGCCATGCTTAGGTACC 1172
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1173 TGAAACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGTGGAAGACCTGATCATTAAGACAATAATCTCT 1246
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1247 GCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCACACCGCAGCAGTTGTTTTGAACTGTATGGCTT 1320
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1321 TGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGGCCTGTGATG 1394
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1395 CTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACATGTTCACTGTTGTAGGATTTGTGTGCCAAGAT 1468
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1469 CCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTGAGTCTTCCAGGCGGAACCCTTTTCAGAAACC 1542
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1543 TCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAAAACCTTGTGGCCTCAGCCCGGGAGAAGGTAC 1616
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1617 CGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGAGATCAAAGTTCTCCGGAGGGTAAAGGAGGAG 1690
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1691 AATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGGAGACATGGGAAATATATGGGTCCTACCTTGA 1764
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1765 ACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTATTCCAGGACAGAGGAAACCCCAGAAGGAGCTTGC 1838
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1839 TGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACCAGAGCTAAAGGTGGAGAGCATGAACTCCAAGGCCAAG 1912
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1913 CTGCATGCCGCTCTCTATGAGAGGAAGCTACTGTCTCTGGAGGTGCGAAAACGTAGACGACGGAGTGGCAGATT 1986
Query 808 -------------------------------------------------------------------------- 807
Sbjct 1987 GAGGGCAATGAGGCCAAAATACCCAGCAACATTAGTGATTCTTCGCATTTAGTGATTGCCCAACCAGCTGAAAT 2060
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2061 GAATATTAAAACCGAGACAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGACAATGACGATGAAGAGCAGGAAG 2134
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2135 CATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAGTACACACCTTCATTGACTGTTATAGTA 2208
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2209 GAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGACTAATAAAGGTGAACCGTGCTGCAAAATCGA 2282
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2283 GGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGATTCTCCAGGACAATGGCAATCTAAGCAAAGTACAGG 2356
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2357 CCCGGTTAGCATTCTCTGCCTATCTTCAGCATGTGCAAATCCGTCTGACAAAAGACAGTGGTGGTCAGACACTC 2430
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2431 AGTCCCAGCTGGGCTGCCAAAGAGGATGAACAGATGGAACTGGTGGTTCGTTTTCTCAAGCGAGCGTCAAGTAA 2504
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2505 CCTCCAGCACTCGCTGAGGATGGTATTGCCTAGTCGGCGGTTGGCACTTCTGGAGCGCAGGAGAATCCTTGCCC 2578
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2579 ACCAGCTAGGAGACTTTATCGGTGTGTACAACAAGGAAACAGAACAAATGGCTGAAAAGAAATCAAAGAAGAAA 2652
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2653 CTTGAAGAAGAGGAAGAAGATGGGGTGAACGCAGAAAGCTTTCAGGAGTTTATTCGACAAGCAAGTGAGGCTGA 2726
Query 808 -------------------------------------------------------------------------- 807
Sbjct 2727 ACTGGAGGAGGTGTTGACTTTTTATACCCAAAAAAACAAGTCTGCCAGTGTCTTCCTGGGGACTCACTCGAAAA 2800
Query 808 ----------------------------------------------------------------- 807
Sbjct 2801 GCTCTAAGAACAGCAGTAGTTACTCTGATAGTGGGGCAAAAGGTGATCACCCTGAGACCATACAA 2865
