Nucleotide Global Alignment

Description

• Query: TRCN0000478940
• Subject: XM_017316730.1
• Aligned Length: 1752
• Identities: 1312
• Gaps: 297

Alignment

Query    1  ATGGCTGCACGGAGCTGGCAGGACGAGCTGGCCCAGCAGGCCGAGGAGGGCTCGGCCCGGCTGCGGGAAATGCT  74
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||..||||
Sbjct    1  ATGGCTGCACGAAGCTGGCAGGACGAGCTGGCCCAGCAGGCCGAGGAGGGCTCTGCCCGGCTGCGGGAGTTGCT  74

Query   75  CTCGGTCGGCCTAGGCTTTCTGCGCACCGAGCTGGGCCTCGACCTGGGGCTGGAGCCGAAACGGTACCCCGGCT  148
            |||||||||||||||.|||||||||||.|||.|||||||||||||||||||.||||||||.||||||||.||||
Sbjct   75  CTCGGTCGGCCTAGGTTTTCTGCGCACGGAGTTGGGCCTCGACCTGGGGCTAGAGCCGAAGCGGTACCCGGGCT  148

Query  149  GGGTGATCCTGGTGGGCACTGGCGCGCTCGGGCTGCTGCTGCTGTTTCTGCTGGGCTACGGCTGGGCCGCGGCT  222
            |||||||||||||||||||.|||||.|||||||||||.|||||.||.||.||.||.||||||||||||||||||
Sbjct  149  GGGTGATCCTGGTGGGCACCGGCGCTCTCGGGCTGCTCCTGCTCTTCCTTCTAGGTTACGGCTGGGCCGCGGCT  222

Query  223  TGCGCCGGCTCCCGCAAAAAGCGGAGGAGCCCGCCCCGCAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCG----  292
            |||||||||.|||||||.|||||.|||||||||||||||||.||||||||||||||       ||.||||    
Sbjct  223  TGCGCCGGCGCCCGCAAGAAGCGAAGGAGCCCGCCCCGCAAACGGGAGGAGGCGGC-------CCCGCCGACTC  289

Query  293  CGGCCCCCGACGACCTGGCCTTGCTGAAGAATCTCCGGAGCGAGGAACAGAAGAAGAAGAACCGGAAGAAACTG  366
            ||||||||||||||||.|||..|||||||||||||.|.||||||||.||.||||||||||||||||||||.|| 
Sbjct  290  CGGCCCCCGACGACCTAGCCCAGCTGAAGAATCTCAGAAGCGAGGAGCAAAAGAAGAAGAACCGGAAGAAGCT-  362

Query  367  TCC-GAGAAGCCCAAACCAAATGGGCGGACTGTTGAAGTGGCTGAGGGTGAAGCTGTTCGAACACCTCAAAGTG  439
            ||| ||.|||||||||||||||||.||||||||||||||..|.||||.|||||.||||.|||..||.|.||||.
Sbjct  363  TCCTGAAAAGCCCAAACCAAATGGACGGACTGTTGAAGTACCCGAGGATGAAGTTGTTAGAAATCCCCGAAGTA  436

Query  440  TAACAGCAAAGCAGCCACCAGAGATTGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAATCAAAGTCA  513
            ||||.|||||.||..|||||||||..||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  437  TAACTGCAAAACAAGCACCAGAGACAGACAAGAAAAATGAAAAGTCAAAGAAAAATAAGAAGAAATCAAAGTCA  510

Query  514  GATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATGAAGGAGCCTGGGAAACTAAAAT  587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct  511  GATGCTAAAGCAGTGCAAAACAGTTCACGCCATGATGGAAAGGAAGTTGATG----------------------  562

Query  588  TAGTCACAGAGAGAAACGACAGCAGCGTAAACGTGATAAGGTGCTGACTGATTCTGGTTCATTGGATTCAACTA  661
                                                                                      
Sbjct  563  --------------------------------------------------------------------------  562

Query  662  TCCCTGGGATAGAAAATACCATCACAGTTACCACCGAGCAACTTACAACCGCATCATTTCCTGTTGGTTCCAAG  735
                                                                                      
Sbjct  563  --------------------------------------------------------------------------  562

Query  736  AAGAATAAAGGTGATTCTCATCTAAATGTTCAAGTTAGCAACTTTAAATCTGGAAAAGGAGATTCTACACTTCA  809
                   ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||
Sbjct  563  -------AAGGTGATTCTCATCTAAATGTTCAAGTTAGCAACTTTAAGTCTGGAAAAGGAGATTCTACACTGCA  629

Query  810  GGTTTCTTCAGGATTGAATGAAAACCTCACTGTCAATGGAGGAGGCTGGAATGAAAAGTCTGTAAAACTCTCCT  883
            ||||||||||.|..||||||||||.||.||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  630  GGTTTCTTCAAGGCTGAATGAAAATCTTACTGTCAATGGAGGAGGCTGGAGTGAAAAGTCTGTAAAACTCTCCT  703

Query  884  CACAGATCAGTGCAGGTGAGGAGAAGTGGAACTCCGTTTCACCTGCTTCTGCAGGAAAGAGGAAAGCTGAGCCA  957
            ||||..|.|      |||||||||||||||||||.||..||||||||||||||||.|||||||||.|.||||||
Sbjct  704  CACAATTGA------GTGAGGAGAAGTGGAACTCTGTCCCACCTGCTTCTGCAGGCAAGAGGAAAACAGAGCCA  771

Query  958  TCTGCCTGGAGTCAAGACACTGGAGATGCTAATACAAATGGAAAAGACTGGGGAAGGAGTTGGAGTGACCGTTC  1031
            ||.||.||||.||||||||||||.||..|||||.|||||||.||||||||||||||||.|||||||||.||.||
Sbjct  772  TCGGCTTGGACTCAAGACACTGGTGACACTAATGCAAATGGGAAAGACTGGGGAAGGAATTGGAGTGATCGCTC  845

Query 1032  AATATTTTCTGGCATTGGGTCTACTGCTGAGCCAGTTTCTCAGTCTACCACTTCTGATTATCAGTGGGATGTTA  1105
            |||||||||||||||||                                                         
Sbjct  846  AATATTTTCTGGCATTG---------------------------------------------------------  862

Query 1106  GCCGTAATCAACCCTATATCGATGATGAATGGTCTGGGTTAAATGGTCTGTCTTCTGCTGATCCCAACTCTGAT  1179
                                                      |||||.|||||||||||||.||.|.|||.||.
Sbjct  863  ------------------------------------------ATGGTTTGTCTTCTGCTGACCCTAGCTCAGAC  894

Query 1180  TGGAATGCACCAGCAGAAGAGTGGGGCAATTGGGTAGACGAAGAAAGAGCTTCACTTCTAAAGTCCCAGGAACC  1253
            |||||||||||||||||.||||||||.||.||||||||.|||||.||||||||||||||.||||||||||||||
Sbjct  895  TGGAATGCACCAGCAGAGGAGTGGGGGAACTGGGTAGATGAAGATAGAGCTTCACTTCTGAAGTCCCAGGAACC  968

Query 1254  AATTCCTGATGATCAAAAGGTCTCAGATGATGATAAAGAAAAGGGAGAGGGAGCTCTTCCAACTGGGAAATCCA  1327
            ||||.||.|||||||||||||.||||||||||||||||||||.||.||||||||||||||||||||.|||||.|
Sbjct  969  AATTTCTAATGATCAAAAGGTTTCAGATGATGATAAAGAAAAAGGGGAGGGAGCTCTTCCAACTGGAAAATCTA  1042

Query 1328  AAAAGAAAAAAAAGAAAAAGAAGAAGCAAGGTGAAGATAACTCT-ACTGCACAGGACACAGAAGAATTAGAAAA  1400
            ||||||||||.||||||||||||||||||||.|||||||||||| || .||||||||||||||||..|||||||
Sbjct 1043  AAAAGAAAAAGAAGAAAAAGAAGAAGCAAGGGGAAGATAACTCTCAC-ACACAGGACACAGAAGACCTAGAAAA  1115

Query 1401  AGAGATTAGAGAAGACCTTCCAGTGAATACCTCTAAAACCCGTCCAAAACAGGAAAAAGCTTTTTCCTTGAAGA  1474
            .||.|.|||||||||.|||||||||||||||||.|||.||||.|||||||||||.|||||||.||||.||||||
Sbjct 1116  GGACACTAGAGAAGAGCTTCCAGTGAATACCTCAAAAGCCCGACCAAAACAGGAGAAAGCTTGTTCCCTGAAGA  1189

Query 1475  CCATAAGCACTAGTGATCCAGCCGAAGTACTCGTCAAAAATAGCCAGCCTATCAAGACTCTTCCACCTGCTACT  1548
            ||||.|||||||||||.|||||.|||||||||.|||||||||||||||||.|||||||||||||.|||||||..
Sbjct 1190  CCATGAGCACTAGTGACCCAGCTGAAGTACTCATCAAAAATAGCCAGCCTGTCAAGACTCTTCCTCCTGCTATC  1263

Query 1549  TCTACCGAGCCATCTGTAATCTTATCAAAAAGTGATTCTGACAAGAGCTCTTCCCAAGTGCCGCCAATACTACA  1622
            |||.|||||||||||.|.|.||||||||||.||||.||||||||.|||||||||||||||||.||.||..||||
Sbjct 1264  TCTGCCGAGCCATCTATTACCTTATCAAAAGGTGACTCTGACAACAGCTCTTCCCAAGTGCCACCGATGTTACA  1337

Query 1623  AGAGACAGATAAATCCAAGTCAAATACCAAGCAAAATAGTGTGCCTCCTTCACAGACCAAGTCTGAAACTAGCT  1696
            |||.|||||.||..|||||||||||.|.||||||||.|||||||||||.||||||||||||||||||||||.||
Sbjct 1338  AGACACAGACAAGCCCAAGTCAAATGCTAAGCAAAACAGTGTGCCTCCCTCACAGACCAAGTCTGAAACTAACT  1411

Query 1697  GGGAATCTCCCAAACAAATAAAAAAGAAGAAAAAAGCCAGACGAGAAACG  1746
            ||||||||||.|||||||||||||||||||||||.||||||||.||||||
Sbjct 1412  GGGAATCTCCAAAACAAATAAAAAAGAAGAAAAAGGCCAGACGGGAAACG  1461