Nucleotide Global Alignment
Description
- Query:
- TRCN0000478966
- Subject:
- NM_001271723.1
- Aligned Length:
- 2888
- Identities:
- 1159
- Gaps:
- 1669
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGCCACGAAAGAAAAGTGTGAAAACATGTATCATGAATAATGAAATTCCAGAAGAAATGACAGCAGATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCTCTGCAGGATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCATGTGTATGGAATGTCTTTCCCGGAAGCTAAAGGAAGCAGTGACCCTATATCTGCGAGTTGTGAGAGTTGTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGCTTTACAGATGCCAGTTTTCTAACACTATTAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGATGCCAGATGTTGAACAGCTATATGGCCTTCACCCTCGATACCTTGAGAGGCGAAGAGTAAGGGGCCATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGCTTTTAGCATTCCAGGAGTCCTAGAAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGGAAACTTCTCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTGGAGTTGGTAGAATCCATTTGGACATATATGCCCCATGTTCATATTTTGGGGAAATTTCGTAATCGTAATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCTTTTCCAATTCCTCCTGAAAATAAACTGAAAATTCCTATAGGAGCCAAAATTCAAACTTTACATTTAGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTGAATGTTCCTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTTATATGAAGTGGGTAAGACTCACTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCACAGCCATTTAAAGACTTCCTTTGTATCAGCTTAAGAACTTTCGTCATGAGGAACTGTGCAGGACCCACAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCCTTGAAATATGTCCCTTTAGTAACAGGCTTAGCCTCTGCCCGAAACTTGGAACACTTAGAAATGGTTCGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCCTTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAATTTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTATTGTTCTGGGAGCTTGCAAAAATGCTCTTGAAGTAGATCTTGGTTACCTCATCATTACTGCTGCCCGTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTTTCCCCAGTTTGAAACCCTTCATCTAGGATATGTAGATGAGTTTTTGCTACAGAGCAGAATGGCTAATGCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA 1258
Query 1 ----------------ATGGA--GGA--GG--GAGATGCAGAGAGTTCTGTCTGCCCCAGATGCT-----GCTG 47
||||| .|| || ||.||..|...|||.|.| |||| ||||| |||
Sbjct 1259 TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGG--TGCC----ATGCTTTGAAGCT- 1325
Query 48 TCACAGGCC--------CCAG------GAAT-----CCCAAAGGAGA---------ACT--AGCAGGTGTTCTG 91
||.| |||| |||| ||||....||| ||| |.|||.|||
Sbjct 1326 -----GGACTCTTTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGT---- 1390
Query 92 ATGAGGAACGTCCTTCAACCAGCC-------GAGCCTGTGTTG---TGAAT---GGC-CCGGA--TGGTACGAG 149
|.|.|.|||||.|| |.||..|.|||| |||.| ||| |.||| |||| |
Sbjct 1391 ----------TTCGTGAACCACCCAAGGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGT----G 1450
Query 150 ----ATCCGC-CTTTT------CCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAG------------C 200
|||.|| |||.| || ||.|||| |.||||.|..|.|..|.|.|||||| .
Sbjct 1451 TTTCATCAGCTCTTGTTAGCAACC---AGAACTC--CAACAATGACGATAATAATGCCCAGAATAACAATGCCA 1519
Query 201 ACAT-------------------------GATGA-------GAGGACTAATGGGAGT---GGC----TCTGGGG 235
|||| ||||| ||||| .||| ||.| ||| ||||..|
Sbjct 1520 ACATCCACGACAACAATCACCATCATCCAGATGACTCAGACGAGGA-GAAT--GACTTTCGGCAAGATCTGCAG 1590
Query 236 C----------------TACAGGTGA-------------------------------------GGACAGGAGGG 256
| |.|||.||| |||.|||.||.
Sbjct 1591 CCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGAGATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGT 1664
Query 257 GG----------------------AGCTCCCAGCC-------------------------TGAG---------- 273
|| |||||.||||| ||||
Sbjct 1665 GGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGATGTTGATGAGGAACAAGCAG 1738
Query 274 -----AGTTGT-----GACGTGCAGT---------CT-AAT-------------------------------GA 296
|||.|| | ||||.||| || ||| ||
Sbjct 1739 GACCCAGTGGTCTTCAG-CGTGTAGTAAAACCAACCTCAATTACTGTTCATGATTCAGAGAGTGATGATGAAGA 1811
Query 297 AGACTACCCTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTG---TCCCATGTACTGCTGGTA---------- 357
||| ||..||.|.| || ||| ||.||.||| |||.|.|.|| ||||
Sbjct 1812 AGA-TAGTCTAGAA-----CT--CCA--------AGAAGTCTGGATTCCTAAGAAC----GGTACTCGGCGTTA 1865
Query 358 -TCTGA------------------------------------------GTCAGAAGTAGCCAAAACAAAGCCAC 388
||||| ||||||||||||||||||||||||||
Sbjct 1866 CTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGAAGTAGCCAAAACAAAGCCAC 1939
Query 389 GTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCAT 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1940 GTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCAT 2013
Query 463 GTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGT 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2014 GTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGT 2087
Query 537 GCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAA 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2088 GCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAA 2161
Query 611 ATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATA 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2162 ATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATA 2235
Query 685 CTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2236 CTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGA 2309
Query 759 GCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCC 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2310 GCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCC 2383
Query 833 GGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTC 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2384 GGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTC 2457
Query 907 TTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATAC 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2458 TTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATAC 2531
Query 981 TTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTG 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2532 TTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTG 2605
Query 1055 CAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAA 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2606 CAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAA 2679
Query 1129 GGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGG 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2680 GGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGG 2753
Query 1203 TGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACA 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2754 TGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACA 2827
Query 1277 TT 1278
||
Sbjct 2828 TT 2829
