Nucleotide Global Alignment
Description
- Query:
- TRCN0000479002
- Subject:
- NR_073509.1
- Aligned Length:
- 2571
- Identities:
- 895
- Gaps:
- 1646
Alignment
Query 1 ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATA-CTGGGAAAATATTTGCCATGAAG 369
.|||.|| ||||| |||
Sbjct 1 -------------------------------------------ACAAGTAGCTGGG-----ATT---------- 16
Query 370 GTGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGA 443
|.||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 17 --------ACAGGCAATGATAGTAGGAAATGCTAAAGATACAGCTCATACAAAAGCAGAATGGAATATTCTGGA 82
Query 444 GGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG 517
.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 83 AGAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCTTTTCAGACTGGTGGAAAACTCTACCTCATCCTTG 156
Query 518 AGTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCT----- 586
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 157 AGTATCTCAGT---GGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCGTGGCCT 227
Query 587 -------------------------------------------------------------------------- 586
Sbjct 228 TTTCTAACACGGAAGCTGCATTTAAGAGCCTTAGGGATGAAGTGCCCTTTTGTGGAGGAGGCTCACTGAGCAGT 301
Query 587 -------------------------------------------------------------------------- 586
Sbjct 302 GTTGGAGGCTGTGTTTGTGGTCGTGCTGGCTGTGAAACTGCCTCAGTCCTTCCTCTAGGACACACCCTCTCCAT 375
Query 587 -------------------------------------------------------------------------- 586
Sbjct 376 CCTGGAATAATCTGCAGGATTGCAACATTGTTAAGCAGCCAGTATTGCGGTGCCTTGTGCTTTTCACATCCAGA 449
Query 587 ------------------------------GCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT 630
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 CAGGGTTGATTCAGCCCTTTATTCTTTTGAGCTTTTACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACAT 523
Query 631 CAAAAGGGGATCATCTACAGAGACCTGAAGCCGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC 704
||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 CAAAAGGGGATCATCTACAGAGACTTGAAGCTGGAGAATATCATGCTTAATCACCAAGGTCATGTGAAACTAAC 597
Query 705 AGACTTTGGACTATGCAAAGAATCTATTCATGATGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA 778
|||||||||||||||||||||||| ||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 598 AGACTTTGGACTATGCAAAGAATC-ATTCATGACGGAACAGTCACACACACATTTTGTGGAACAATAGAATACA 670
Query 779 TGGCCCCTGAAATCTTGATGAGAAGTGGCCACA-ATCGTGCTGTGGATTGGTGGAGTTTGGGAGCATTAATGTA 851
|| || |.||..|||..|| ||| | ||||| ||.||||
Sbjct 671 TG-----TG--AGCTGCATGTTAA------ACATA-----------ATTGG------TTTGGAG---------- 704
Query 852 TGACATGCTGACTGGAGCACCCCCATTCACTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTA 925
||.|||||.||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 705 -------------------CCTCCATTTACTGGGGAGAATAGAAAGAAAACAATTGACAACATCCTCAAATGTA 759
Query 926 AACTCAATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCT 999
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 760 AACT-AATTTGCCTCCCTACCTCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTACTGAAAAGAAATGCTGCT 832
Query 1000 TCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA 1073
||||.|||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 833 TCTCATCTGGGAGCTGGTCCTGGGGATGCTGGAGATGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGA 906
Query 1074 AGAACTTCTGGCTCGAAAGGTGGAGCCCCCCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG 1147
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 AGAACTTCTGGCTCGAAAGGTGGAGCCCCCATTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTG 980
Query 1148 ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTC 1221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 981 ATTCCAAGTTTACACGTCAGACACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCCATCAGGTC 1054
Query 1222 TTTCTGGGTTTTACATATGTGGCTCCATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT 1295
||||||||||||||.|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1055 TTTCTGGGTTTTACTTATGTGGCTCCATCTGTACTTG-AAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAAT 1127
Query 1296 CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAG-------TACTGCT----ATGTGC----- 1353
||||||||||||||||||||||||||||||||||||||||||||| |.||.|| || |.|
Sbjct 1128 CCGATCACCTCGAAGATTTATTGGCAGCCCACGAACACCTGTCAGCCCAATTTTCTCCTGGGGAT-TTCTGGGG 1200
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1201 AAGAGGCGCTTCGGCCAGCACAGCAAATCCTCAGACACCTGTGGAATACCCAATGGAAACAAGTGGCACAGAGC 1274
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1275 AGATGGATGTGACAACGAGTGGGGAAGCATTGGCACCACTTCCAATACGACAGCCGAACTCTGGGCCATACAAA 1348
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1349 AAACAAGCTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAATCTATGCCACAGCAATGCTTTTAA 1422
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1423 TGAATTTAAGGCAAAAAAGGTGGAGAGGCCGATGTGTGAGCATCCTACAGGGTGAAACAAGACTCAAAGTGACA 1496
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1497 ATTTCAGAGAGTCAGTGTCATTACATAGAACACTTTGGACAGAGGAAAAATAAACATGGATTTTAAAAAAATCA 1570
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1571 ATCAATCGTGCAAAAAAACTTAAAGCAAAATAGTACTGCTGAACACTCAGGCACATCAATTAATTGTTTCCTCG 1644
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1645 TGACATCTTCTCAACCTTATCAAGGATTTTCATGTTGATGACTCGAAACTGACAGTATTAAGGGTAGGATGTTG 1718
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1719 CTTCTGAATCACTGTTGAGTTCTAACTGTGTCGAAGAAGGGTTATCCTTTCATTAGGCAAAGTACAAAATTGCC 1792
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1793 TATAATACTTGCAACTAAGGACAAATTAGCATGCAAGCTTGGTCAAACTTTTTCCAGCAACATGGAATCAAAGA 1866
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1867 CAAAAGAAACTTACCAATTGATGTTTTACGTGAACATAACCTGAATCTTTTTTTATATAAATATATATTTTTCA 1940
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 1941 AGTAGATTTTTGATTCAGCTCATTATGAAAAACATCCCAAACTTTAAAATGCGAAATTATTAGTTGGTGTGAAG 2014
Query 1354 -------------------------------------------------------------------------- 1353
Sbjct 2015 AAAGCCAAACAACTTCCGTTTCTTCTCTTGGTGAAATAATAAAATGCAAATGAATCATTGTTAACCACATCTGT 2088
Query 1354 ------------------------------------------------------- 1353
Sbjct 2089 GGCTCGTTCGAGGGACTGGGGTGGACCTGGGGTTTATTTTCAGTAACCCAGCTGC 2143
